RNA–Protein interactions for RNA: ENST00000611559.1

AC027088.4-201, humanhuman

BASIC

Gene AC027088.4, Length 1,947 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027088.4-201ENST00000611559 PCDH11XQ9BZA7 1347 aa8.04□□□□□ -1.12
AC027088.4-201ENST00000611559 PCDH11YQ9BZA8 1340 aa8.04□□□□□ -1.12
AC027088.4-201ENST00000611559 FXR2P51116 673 aaKnown RBP eCLIP8.04□□□□□ -1.12
AC027088.4-201ENST00000611559 DDX54Q8TDD1 881 aaKnown RBP8.04□□□□□ -1.12
AC027088.4-201ENST00000611559 EN1Q05925 392 aaPredicted RBP8.03□□□□□ -1.12
AC027088.4-201ENST00000611559 CAMKK2Q96RR4 588 aa8.03□□□□□ -1.12
AC027088.4-201ENST00000611559 SPG7Q9UQ90 795 aa8.03□□□□□ -1.12
AC027088.4-201ENST00000611559 PLSCR1O15162 318 aa8.03□□□□□ -1.12
AC027088.4-201ENST00000611559 IL13P35225 146 aa8.03□□□□□ -1.12
AC027088.4-201ENST00000611559 MFRPQ9BY79 579 aa8.03□□□□□ -1.12
AC027088.4-201ENST00000611559 NHSQ6T4R5 1651 aa8.02□□□□□ -1.13
AC027088.4-201ENST00000611559 KDRP35968 1356 aa8.02□□□□□ -1.13
AC027088.4-201ENST00000611559 DIEXFQ68CQ4 756 aaKnown RBP8.02□□□□□ -1.13
AC027088.4-201ENST00000611559 SBF2Q86WG5 1849 aa8.02□□□□□ -1.13
AC027088.4-201ENST00000611559 PKD1L3Q7Z443 1732 aa8.02□□□□□ -1.13
AC027088.4-201ENST00000611559 RGPD3A6NKT7 1758 aaPredicted RBP8.02□□□□□ -1.13
AC027088.4-201ENST00000611559 RGPD4Q7Z3J3 1758 aa8.02□□□□□ -1.13
AC027088.4-201ENST00000611559 DIAPH1O60610 1272 aaKnown RBP8.01□□□□□ -1.13
AC027088.4-201ENST00000611559 PSEN1P49768 467 aa8.01□□□□□ -1.13
AC027088.4-201ENST00000611559 EZH2Q15910 746 aaKnown RBP8.01□□□□□ -1.13
AC027088.4-201ENST00000611559 ZNF579Q8NAF0 562 aaKnown RBP8.01□□□□□ -1.13
AC027088.4-201ENST00000611559 CFAP53Q96M91 514 aa8.01□□□□□ -1.13
AC027088.4-201ENST00000611559 SHANK3Q9BYB0 1731 aa8.01□□□□□ -1.13
AC027088.4-201ENST00000611559 COL3A1P02461 1466 aaPredicted RBP8.01□□□□□ -1.13
AC027088.4-201ENST00000611559 CYP27B1O15528 508 aa8.01□□□□□ -1.13
AC027088.4-201ENST00000611559 PPP2R1AP30153 589 aa8.01□□□□□ -1.13
AC027088.4-201ENST00000611559 CNGB1Q14028 1251 aaPredicted RBP8.01□□□□□ -1.13
AC027088.4-201ENST00000611559 AMOTQ4VCS5 1084 aa8.01□□□□□ -1.13
AC027088.4-201ENST00000611559 ACSBG1Q96GR2 724 aa8.01□□□□□ -1.13
AC027088.4-201ENST00000611559 KCNQ2O43526 872 aa8□□□□□ -1.13
AC027088.4-201ENST00000611559 DDX10Q13206 875 aaKnown RBP8□□□□□ -1.13
AC027088.4-201ENST00000611559 PLEKHO1Q53GL0 409 aaPredicted RBP8□□□□□ -1.13
AC027088.4-201ENST00000611559 SULT6B1Q6IMI4 303 aa8□□□□□ -1.13
AC027088.4-201ENST00000611559 PTF1AQ7RTS3 328 aa8□□□□□ -1.13
AC027088.4-201ENST00000611559 IFNL1Q8IU54 200 aa8□□□□□ -1.13
AC027088.4-201ENST00000611559 IFNL2Q8IZJ0 200 aa8□□□□□ -1.13
AC027088.4-201ENST00000611559 AEBP1Q8IUX7 1158 aa7.99□□□□□ -1.13
AC027088.4-201ENST00000611559 RREB1Q92766 1687 aa7.99□□□□□ -1.13
AC027088.4-201ENST00000611559 HSP90AB1P08238 724 aaKnown RBP7.99□□□□□ -1.13
AC027088.4-201ENST00000611559 PHKG2P15735 406 aa7.99□□□□□ -1.13
AC027088.4-201ENST00000611559 PRIM1P49642 420 aaKnown RBP7.99□□□□□ -1.13
AC027088.4-201ENST00000611559 RALBP1Q15311 655 aa7.99□□□□□ -1.13
AC027088.4-201ENST00000611559 NUDCQ9Y266 331 aa7.99□□□□□ -1.13
AC027088.4-201ENST00000611559 MAP3K13O43283 966 aa7.98□□□□□ -1.13
AC027088.4-201ENST00000611559 NBPF14Q5TI25 921 aa7.98□□□□□ -1.13
AC027088.4-201ENST00000611559 SYTL4Q96C24 671 aaPredicted RBP7.98□□□□□ -1.13
AC027088.4-201ENST00000611559 DOT1LQ8TEK3 1739 aa7.98□□□□□ -1.13
AC027088.4-201ENST00000611559 TXNRD1Q16881 649 aa7.97□□□□□ -1.13
AC027088.4-201ENST00000611559 C1orf141Q5JVX7 400 aa7.97□□□□□ -1.13
AC027088.4-201ENST00000611559 ZNF530Q6P9A1 599 aaPredicted RBP7.97□□□□□ -1.13
AC027088.4-201ENST00000611559 KCNV2Q8TDN2 545 aa7.97□□□□□ -1.13
AC027088.4-201ENST00000611559 NUP188Q5SRE5 1749 aa7.97□□□□□ -1.13
AC027088.4-201ENST00000611559 BTAF1O14981 1849 aa7.97□□□□□ -1.13
AC027088.4-201ENST00000611559 U2SURPO15042 1029 aaKnown RBP7.97□□□□□ -1.13
AC027088.4-201ENST00000611559 PPP1R37O75864 691 aa7.97□□□□□ -1.13
AC027088.4-201ENST00000611559 HMGB2P26583 209 aaKnown RBP7.97□□□□□ -1.13
AC027088.4-201ENST00000611559 SLC27A3Q5K4L6 730 aa7.97□□□□□ -1.13
AC027088.4-201ENST00000611559 KIF12Q96FN5 646 aa7.97□□□□□ -1.13
AC027088.4-201ENST00000611559 DCAF5Q96JK2 942 aa7.97□□□□□ -1.13
AC027088.4-201ENST00000611559 ERVV-2B6SEH9 535 aa7.96□□□□□ -1.13
AC027088.4-201ENST00000611559 HMOX1P09601 288 aa7.96□□□□□ -1.13
AC027088.4-201ENST00000611559 PIP4P2Q8N4L2 257 aa7.96□□□□□ -1.13
AC027088.4-201ENST00000611559 SMARCC1Q92922 1105 aaPredicted RBP7.96□□□□□ -1.13
AC027088.4-201ENST00000611559 AKAP4Q5JQC9 854 aa7.95□□□□□ -1.14
AC027088.4-201ENST00000611559 TMOD3Q9NYL9 352 aa7.95□□□□□ -1.14
AC027088.4-201ENST00000611559 MYBBP1AQ9BQG0 1328 aaKnown RBP7.95□□□□□ -1.14
AC027088.4-201ENST00000611559 TOGARAM1Q9Y4F4 1720 aa7.95□□□□□ -1.14
AC027088.4-201ENST00000611559 R3HDM1Q15032 1099 aaKnown RBP7.95□□□□□ -1.14
AC027088.4-201ENST00000611559 MPRIPQ6WCQ1 1025 aa7.95□□□□□ -1.14
AC027088.4-201ENST00000611559 EFCAB3Q8N7B9 438 aa7.95□□□□□ -1.14
AC027088.4-201ENST00000611559 FBXO22Q8NEZ5 403 aa7.95□□□□□ -1.14
AC027088.4-201ENST00000611559 FCHSD2O94868 740 aa7.94□□□□□ -1.14
AC027088.4-201ENST00000611559 U2AF1L5P0DN76 240 aaPredicted RBP7.94□□□□□ -1.14
AC027088.4-201ENST00000611559 U2AF1Q01081 240 aaKnown RBP eCLIP7.94□□□□□ -1.14
AC027088.4-201ENST00000611559 CHRDL2Q6WN34 429 aa7.94□□□□□ -1.14
AC027088.4-201ENST00000611559 GAS2L2Q8NHY3 880 aa7.94□□□□□ -1.14
AC027088.4-201ENST00000611559 PIGBQ92521 554 aa7.94□□□□□ -1.14
AC027088.4-201ENST00000611559 RSPH6AQ9H0K4 717 aa7.94□□□□□ -1.14
AC027088.4-201ENST00000611559 STK32BQ9NY57 414 aa7.94□□□□□ -1.14
AC027088.4-201ENST00000611559 PALLDQ8WX93 1383 aa7.94□□□□□ -1.14
AC027088.4-201ENST00000611559 KDM6AO15550 1401 aaPredicted RBP7.94□□□□□ -1.14
AC027088.4-201ENST00000611559 PSDA5PKW4 1024 aaPredicted RBP7.93□□□□□ -1.14
AC027088.4-201ENST00000611559 MTHFSDQ2M296 383 aaKnown RBP7.93□□□□□ -1.14
AC027088.4-201ENST00000611559 ANO8Q9HCE9 1232 aaPredicted RBP7.93□□□□□ -1.14
AC027088.4-201ENST00000611559 KAT6BQ8WYB5 2073 aa7.93□□□□□ -1.14
AC027088.4-201ENST00000611559 PAPPAQ13219 1627 aa7.93□□□□□ -1.14
AC027088.4-201ENST00000611559 PRKAR2BP31323 418 aa7.93□□□□□ -1.14
AC027088.4-201ENST00000611559 CABP4P57796 275 aa7.93□□□□□ -1.14
AC027088.4-201ENST00000611559 SLC15A2Q16348 729 aa7.93□□□□□ -1.14
AC027088.4-201ENST00000611559 PRKRIP1Q9H875 184 aaPredicted RBP7.93□□□□□ -1.14
AC027088.4-201ENST00000611559 LRRC4BQ9NT99 713 aa7.93□□□□□ -1.14
AC027088.4-201ENST00000611559 CCNL1Q9UK58 526 aaPredicted RBP7.93□□□□□ -1.14
AC027088.4-201ENST00000611559 LY75O60449 1722 aa7.93□□□□□ -1.14
AC027088.4-201ENST00000611559 MAP3K5Q99683 1374 aa7.92□□□□□ -1.14
AC027088.4-201ENST00000611559 PNNQ9H307 717 aaKnown RBP7.92□□□□□ -1.14
AC027088.4-201ENST00000611559 MRC1P22897 1456 aa7.92□□□□□ -1.14
AC027088.4-201ENST00000611559 ITGB4P16144 1822 aa7.92□□□□□ -1.14
AC027088.4-201ENST00000611559 RNMTO43148 476 aaKnown RBP7.91□□□□□ -1.14
AC027088.4-201ENST00000611559 NEFMP07197 916 aa7.91□□□□□ -1.14
AC027088.4-201ENST00000611559 WDR70Q9NW82 654 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms