RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 RGS12O14924 1447 aa14.97□□□□□ -0.01
CDCA3-212ENST00000604599 POLKQ9UBT6 870 aa14.97□□□□□ -0.01
CDCA3-212ENST00000604599 FEZ1Q99689 392 aa14.96□□□□□ -0.01
CDCA3-212ENST00000604599 RPAP1Q9BWH6 1393 aaPredicted RBP14.96□□□□□ -0.01
CDCA3-212ENST00000604599 TRIM6-TRIM34B2RNG4 842 aa14.96□□□□□ -0.01
CDCA3-212ENST00000604599 DTNBO60941 627 aa14.96□□□□□ -0.01
CDCA3-212ENST00000604599 TMEM51Q9NW97 253 aa14.96□□□□□ -0.01
CDCA3-212ENST00000604599 EXOC6BQ9Y2D4 811 aa14.96□□□□□ -0.01
CDCA3-212ENST00000604599 PTGS1P23219 599 aa14.96□□□□□ -0.02
CDCA3-212ENST00000604599 UBE2HP62256 183 aa14.96□□□□□ -0.02
CDCA3-212ENST00000604599 NAA30Q147X3 362 aaPredicted RBP14.96□□□□□ -0.02
CDCA3-212ENST00000604599 TMEM87AQ8NBN3 555 aa14.96□□□□□ -0.02
CDCA3-212ENST00000604599 C16orf45Q96MC5 204 aaPredicted RBP14.96□□□□□ -0.02
CDCA3-212ENST00000604599 LARP6Q9BRS8 491 aaKnown RBP14.96□□□□□ -0.02
CDCA3-212ENST00000604599 OGFRQ9NZT2 677 aa14.96□□□□□ -0.02
CDCA3-212ENST00000604599 CD163L1Q9NR16 1453 aa14.95□□□□□ -0.02
CDCA3-212ENST00000604599 CDC42BPGQ6DT37 1551 aa14.95□□□□□ -0.02
CDCA3-212ENST00000604599 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.95□□□□□ -0.02
CDCA3-212ENST00000604599 FUCA2Q9BTY2 467 aa14.95□□□□□ -0.02
CDCA3-212ENST00000604599 ZFYVE9O95405 1425 aa14.95□□□□□ -0.02
CDCA3-212ENST00000604599 NPATQ14207 1427 aa14.95□□□□□ -0.02
CDCA3-212ENST00000604599 HDGFL2Q7Z4V5 671 aaPredicted RBP14.94□□□□□ -0.02
CDCA3-212ENST00000604599 EMILIN1Q9Y6C2 1016 aa14.94□□□□□ -0.02
CDCA3-212ENST00000604599 RIMS2Q9UQ26 1411 aa14.94□□□□□ -0.02
CDCA3-212ENST00000604599 ANAPC15P60006 121 aa14.94□□□□□ -0.02
CDCA3-212ENST00000604599 PDE4CQ08493 712 aa14.94□□□□□ -0.02
CDCA3-212ENST00000604599 OSBPL3Q9H4L5 887 aa14.94□□□□□ -0.02
CDCA3-212ENST00000604599 DLG5Q8TDM6 1919 aa14.94□□□□□ -0.02
CDCA3-212ENST00000604599 VGLL3A8MV65 326 aa14.93□□□□□ -0.02
CDCA3-212ENST00000604599 GOLGA6L6A8MZA4 724 aa14.93□□□□□ -0.02
CDCA3-212ENST00000604599 CTNNA3Q9UI47 895 aa14.93□□□□□ -0.02
CDCA3-212ENST00000604599 ZSCAN22P10073 491 aaPredicted RBP14.93□□□□□ -0.02
CDCA3-212ENST00000604599 CHMLP26374 656 aa14.93□□□□□ -0.02
CDCA3-212ENST00000604599 TAF3Q5VWG9 929 aa14.93□□□□□ -0.02
CDCA3-212ENST00000604599 HMMRO75330 724 aa14.93□□□□□ -0.02
CDCA3-212ENST00000604599 GGT6Q6P531 493 aa14.93□□□□□ -0.02
CDCA3-212ENST00000604599 CABP1Q9NZU7 370 aa14.93□□□□□ -0.02
CDCA3-212ENST00000604599 TPM3P06753 285 aa14.92□□□□□ -0.02
CDCA3-212ENST00000604599 LRMPQ12912 555 aa14.92□□□□□ -0.02
CDCA3-212ENST00000604599 SLC4A10Q6U841 1118 aa14.92□□□□□ -0.02
CDCA3-212ENST00000604599 IL25Q9H293 177 aa14.92□□□□□ -0.02
CDCA3-212ENST00000604599 ABCC3O15438 1527 aa14.92□□□□□ -0.02
CDCA3-212ENST00000604599 RPGRIP1LQ68CZ1 1315 aa14.92□□□□□ -0.02
CDCA3-212ENST00000604599 STX6O43752 255 aa14.91□□□□□ -0.02
CDCA3-212ENST00000604599 SYT1P21579 422 aa14.91□□□□□ -0.02
CDCA3-212ENST00000604599 PRAM1Q96QH2 718 aa14.91□□□□□ -0.02
CDCA3-212ENST00000604599 VGFO15240 615 aaPredicted RBP14.91□□□□□ -0.02
CDCA3-212ENST00000604599 LMOD3Q0VAK6 560 aa14.91□□□□□ -0.02
CDCA3-212ENST00000604599 UNC5CLQ8IV45 518 aa14.91□□□□□ -0.02
CDCA3-212ENST00000604599 CHMP3Q9Y3E7 222 aa14.91□□□□□ -0.02
CDCA3-212ENST00000604599 MAP2P11137 1827 aaKnown RBP14.91□□□□□ -0.02
CDCA3-212ENST00000604599 KIF20BQ96Q89 1820 aa14.9□□□□□ -0.02
CDCA3-212ENST00000604599 F13A1P00488 732 aa14.9□□□□□ -0.02
CDCA3-212ENST00000604599 GABPB1Q06547 395 aaPredicted RBP14.9□□□□□ -0.02
CDCA3-212ENST00000604599 CCDC186Q7Z3E2 898 aa14.9□□□□□ -0.02
CDCA3-212ENST00000604599 F6X3S4 739 aa14.89□□□□□ -0.03
CDCA3-212ENST00000604599 SLFN14P0C7P3 912 aa14.89□□□□□ -0.03
CDCA3-212ENST00000604599 DNM1Q05193 864 aaKnown RBP14.89□□□□□ -0.03
CDCA3-212ENST00000604599 DDX41Q9UJV9 622 aaKnown RBP14.89□□□□□ -0.03
CDCA3-212ENST00000604599 TNNT1P13805 278 aa14.89□□□□□ -0.03
CDCA3-212ENST00000604599 LUZP1Q86V48 1076 aa14.89□□□□□ -0.03
CDCA3-212ENST00000604599 DRC7Q8IY82 874 aa14.89□□□□□ -0.03
CDCA3-212ENST00000604599 SMTNL1A8MU46 457 aa14.89□□□□□ -0.03
CDCA3-212ENST00000604599 CCDC192P0DO97 292 aa14.89□□□□□ -0.03
CDCA3-212ENST00000604599 IL13P35225 146 aa14.89□□□□□ -0.03
CDCA3-212ENST00000604599 NRBP1Q9UHY1 535 aa14.89□□□□□ -0.03
CDCA3-212ENST00000604599 CDK11BP21127 795 aaKnown RBP14.88□□□□□ -0.03
CDCA3-212ENST00000604599 LRRCC1Q9C099 1032 aa14.88□□□□□ -0.03
CDCA3-212ENST00000604599 NAP1L2Q9ULW6 460 aaPredicted RBP14.88□□□□□ -0.03
CDCA3-212ENST00000604599 CHD1O14646 1710 aa14.88□□□□□ -0.03
CDCA3-212ENST00000604599 SALL3Q9BXA9 1300 aa14.87□□□□□ -0.03
CDCA3-212ENST00000604599 KCNJ4P48050 445 aa14.87□□□□□ -0.03
CDCA3-212ENST00000604599 CAMK4Q16566 473 aa14.87□□□□□ -0.03
CDCA3-212ENST00000604599 CCDC112Q8NEF3 446 aa14.87□□□□□ -0.03
CDCA3-212ENST00000604599 ZNF592Q92610 1267 aa14.87□□□□□ -0.03
CDCA3-212ENST00000604599 SMC3Q9UQE7 1217 aa14.87□□□□□ -0.03
CDCA3-212ENST00000604599 LMTK2Q8IWU2 1503 aa14.87□□□□□ -0.03
CDCA3-212ENST00000604599 YTHDC2Q9H6S0 1430 aaKnown RBP14.87□□□□□ -0.03
CDCA3-212ENST00000604599 SLC4A2P04920 1241 aa14.87□□□□□ -0.03
CDCA3-212ENST00000604599 AK2P54819 239 aa14.87□□□□□ -0.03
CDCA3-212ENST00000604599 KIF18AQ8NI77 898 aa14.86□□□□□ -0.03
CDCA3-212ENST00000604599 FAM200AQ8TCP9 573 aa14.86□□□□□ -0.03
CDCA3-212ENST00000604599 CDK19Q9BWU1 502 aa14.86□□□□□ -0.03
CDCA3-212ENST00000604599 ATP6V1DQ9Y5K8 247 aa14.86□□□□□ -0.03
CDCA3-212ENST00000604599 SSH2Q76I76 1423 aa14.86□□□□□ -0.03
CDCA3-212ENST00000604599 ARAP3Q8WWN8 1544 aa14.86□□□□□ -0.03
CDCA3-212ENST00000604599 TUBGCP6Q96RT7 1819 aa14.86□□□□□ -0.03
CDCA3-212ENST00000604599 MAP4K4O95819 1239 aaPredicted RBP14.86□□□□□ -0.03
CDCA3-212ENST00000604599 HSPA4P34932 840 aa14.86□□□□□ -0.03
CDCA3-212ENST00000604599 MAPK8IP2Q13387 824 aaPredicted RBP14.86□□□□□ -0.03
CDCA3-212ENST00000604599 PTPRCP08575 1304 aa14.86□□□□□ -0.03
CDCA3-212ENST00000604599 CPA1P15085 419 aa14.86□□□□□ -0.03
CDCA3-212ENST00000604599 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.86□□□□□ -0.03
CDCA3-212ENST00000604599 V9GYY5 206 aaPredicted RBP14.86□□□□□ -0.03
CDCA3-212ENST00000604599 ERICH4A6NGS2 130 aa14.85□□□□□ -0.03
CDCA3-212ENST00000604599 LARGE1O95461 756 aa14.85□□□□□ -0.03
CDCA3-212ENST00000604599 SYCP1Q15431 976 aa14.85□□□□□ -0.03
CDCA3-212ENST00000604599 TERF2Q15554 542 aa14.85□□□□□ -0.03
CDCA3-212ENST00000604599 RUFY3Q7L099 469 aa14.85□□□□□ -0.03
CDCA3-212ENST00000604599 MCM10Q7L590 875 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms