RNA–Protein interactions for RNA: ENST00000603907.1

GRAMD1A-214, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-214ENST00000603907 GIGYF1O75420 1035 aaPredicted RBP27.66■■■□□ 2.02
GRAMD1A-214ENST00000603907 SHANK3Q9BYB0 1731 aa27.66■■■□□ 2.02
GRAMD1A-214ENST00000603907 NEFMP07197 916 aa27.65■■■□□ 2.02
GRAMD1A-214ENST00000603907 CCDC184Q52MB2 194 aa27.65■■■□□ 2.02
GRAMD1A-214ENST00000603907 IFNL2Q8IZJ0 200 aa27.65■■■□□ 2.02
GRAMD1A-214ENST00000603907 KCNQ4P56696 695 aa27.64■■■□□ 2.02
GRAMD1A-214ENST00000603907 CYP27B1O15528 508 aa27.63■■■□□ 2.01
GRAMD1A-214ENST00000603907 ZNF530Q6P9A1 599 aaPredicted RBP27.62■■■□□ 2.01
GRAMD1A-214ENST00000603907 GAS2L2Q8NHY3 880 aa27.62■■■□□ 2.01
GRAMD1A-214ENST00000603907 PNISRQ8TF01 805 aaKnown RBP27.62■■■□□ 2.01
GRAMD1A-214ENST00000603907 CCNL1Q9UK58 526 aaPredicted RBP27.62■■■□□ 2.01
GRAMD1A-214ENST00000603907 HSP90AB1P08238 724 aaKnown RBP27.61■■■□□ 2.01
GRAMD1A-214ENST00000603907 PHKG2P15735 406 aa27.61■■■□□ 2.01
GRAMD1A-214ENST00000603907 NKX1-1Q15270 411 aaPredicted RBP27.61■■■□□ 2.01
GRAMD1A-214ENST00000603907 NLGN2Q8NFZ4 835 aa27.61■■■□□ 2.01
GRAMD1A-214ENST00000603907 ADAMTS8Q9UP79 889 aa27.61■■■□□ 2.01
GRAMD1A-214ENST00000603907 MSH5O43196 834 aa27.6■■■□□ 2.01
GRAMD1A-214ENST00000603907 C1orf141Q5JVX7 400 aa27.6■■■□□ 2.01
GRAMD1A-214ENST00000603907 PLEKHF1Q96S99 279 aa27.6■■■□□ 2.01
GRAMD1A-214ENST00000603907 GRIN3BO60391 1043 aa27.59■■■□□ 2.01
GRAMD1A-214ENST00000603907 MTHFSDQ2M296 383 aaKnown RBP27.59■■■□□ 2.01
GRAMD1A-214ENST00000603907 AKAP4Q5JQC9 854 aa27.59■■■□□ 2.01
GRAMD1A-214ENST00000603907 PHACTR3Q96KR7 559 aa27.57■■■□□ 2
GRAMD1A-214ENST00000603907 MAPK8IP3Q9UPT6 1336 aa27.57■■■□□ 2
GRAMD1A-214ENST00000603907 HMGB2P26583 209 aaKnown RBP27.55■■■□□ 2
GRAMD1A-214ENST00000603907 RUNDC1Q96C34 613 aa27.55■■■□□ 2
GRAMD1A-214ENST00000603907 DCAF5Q96JK2 942 aa27.55■■■□□ 2
GRAMD1A-214ENST00000603907 MIER1Q8N108 512 aa27.54■■■□□ 2
GRAMD1A-214ENST00000603907 COL23A1Q86Y22 540 aaPredicted RBP27.53■■■□□ 2
GRAMD1A-214ENST00000603907 C5P01031 1676 aa27.52■■■□□ 2
GRAMD1A-214ENST00000603907 YBX3P16989 372 aaKnown RBP eCLIP27.51■■□□□ 1.99
GRAMD1A-214ENST00000603907 GNAT3A8MTJ3 354 aa27.5■■□□□ 1.99
GRAMD1A-214ENST00000603907 ERVV-2B6SEH9 535 aa27.49■■□□□ 1.99
GRAMD1A-214ENST00000603907 HTATSF1O43719 755 aaKnown RBP27.49■■□□□ 1.99
GRAMD1A-214ENST00000603907 NFE2L2Q16236 605 aa27.49■■□□□ 1.99
GRAMD1A-214ENST00000603907 FLAD1Q8NFF5 587 aa27.49■■□□□ 1.99
GRAMD1A-214ENST00000603907 MSL1Q68DK7 614 aa27.48■■□□□ 1.99
GRAMD1A-214ENST00000603907 CCDC146Q8IYE0 955 aa27.47■■□□□ 1.99
GRAMD1A-214ENST00000603907 KDM6AO15550 1401 aaPredicted RBP27.47■■□□□ 1.99
GRAMD1A-214ENST00000603907 TAF1LQ8IZX4 1826 aa27.46■■□□□ 1.99
GRAMD1A-214ENST00000603907 MPRIPQ6WCQ1 1025 aa27.46■■□□□ 1.99
GRAMD1A-214ENST00000603907 RNMTO43148 476 aaKnown RBP27.45■■□□□ 1.98
GRAMD1A-214ENST00000603907 CD2APQ9Y5K6 639 aa27.45■■□□□ 1.98
GRAMD1A-214ENST00000603907 ADAMTS7Q9UKP4 1686 aa27.45■■□□□ 1.98
GRAMD1A-214ENST00000603907 GOLGB1Q14789 3259 aaKnown RBP27.45■■□□□ 1.98
GRAMD1A-214ENST00000603907 TMPOP42166 694 aaKnown RBP27.44■■□□□ 1.98
GRAMD1A-214ENST00000603907 FAM9BQ8IZU0 186 aa27.44■■□□□ 1.98
GRAMD1A-214ENST00000603907 RTF1Q92541 710 aaKnown RBP27.44■■□□□ 1.98
GRAMD1A-214ENST00000603907 TOGARAM1Q9Y4F4 1720 aa27.43■■□□□ 1.98
GRAMD1A-214ENST00000603907 PALLDQ8WX93 1383 aa27.43■■□□□ 1.98
GRAMD1A-214ENST00000603907 SCN11AQ9UI33 1791 aa27.43■■□□□ 1.98
GRAMD1A-214ENST00000603907 LMOD3Q0VAK6 560 aa27.42■■□□□ 1.98
GRAMD1A-214ENST00000603907 ATP10DQ9P241 1426 aa27.41■■□□□ 1.98
GRAMD1A-214ENST00000603907 CABP4P57796 275 aa27.41■■□□□ 1.98
GRAMD1A-214ENST00000603907 TMOD3Q9NYL9 352 aa27.41■■□□□ 1.98
GRAMD1A-214ENST00000603907 CEMIPQ8WUJ3 1361 aa27.4■■□□□ 1.98
GRAMD1A-214ENST00000603907 RIPK4P57078 832 aa27.4■■□□□ 1.98
GRAMD1A-214ENST00000603907 LGR6Q9HBX8 967 aa27.4■■□□□ 1.98
GRAMD1A-214ENST00000603907 MRC1P22897 1456 aa27.39■■□□□ 1.98
GRAMD1A-214ENST00000603907 NCBP3Q53F19 620 aaKnown RBP27.39■■□□□ 1.98
GRAMD1A-214ENST00000603907 IL17REQ8NFR9 667 aa27.39■■□□□ 1.98
GRAMD1A-214ENST00000603907 SMARCC1Q92922 1105 aaPredicted RBP27.39■■□□□ 1.98
GRAMD1A-214ENST00000603907 C4BP0C0L5 1744 aa27.38■■□□□ 1.97
GRAMD1A-214ENST00000603907 APAF1O14727 1248 aa27.38■■□□□ 1.97
GRAMD1A-214ENST00000603907 AK7Q96M32 723 aa27.38■■□□□ 1.97
GRAMD1A-214ENST00000603907 SLC52A2Q9HAB3 445 aa27.38■■□□□ 1.97
GRAMD1A-214ENST00000603907 ITGB4P16144 1822 aa27.38■■□□□ 1.97
GRAMD1A-214ENST00000603907 PIGBQ92521 554 aa27.37■■□□□ 1.97
GRAMD1A-214ENST00000603907 GPBP1L1Q9HC44 474 aaPredicted RBP27.37■■□□□ 1.97
GRAMD1A-214ENST00000603907 DLG5Q8TDM6 1919 aa27.36■■□□□ 1.97
GRAMD1A-214ENST00000603907 IFFO2Q5TF58 517 aa27.36■■□□□ 1.97
GRAMD1A-214ENST00000603907 TEFQ10587 303 aa27.35■■□□□ 1.97
GRAMD1A-214ENST00000603907 NGEFQ8N5V2 710 aa27.34■■□□□ 1.97
GRAMD1A-214ENST00000603907 NFATC2IPQ8NCF5 419 aa27.34■■□□□ 1.97
GRAMD1A-214ENST00000603907 VIRMAQ69YN4 1812 aaKnown RBP27.34■■□□□ 1.97
GRAMD1A-214ENST00000603907 UBR3Q6ZT12 1888 aa27.34■■□□□ 1.97
GRAMD1A-214ENST00000603907 NEUROD2Q15784 382 aa27.33■■□□□ 1.97
GRAMD1A-214ENST00000603907 MCM10Q7L590 875 aa27.33■■□□□ 1.97
GRAMD1A-214ENST00000603907 RRP7AQ9Y3A4 280 aaKnown RBP27.33■■□□□ 1.97
GRAMD1A-214ENST00000603907 CCDC27Q2M243 656 aa27.31■■□□□ 1.96
GRAMD1A-214ENST00000603907 ADCY9O60503 1353 aa27.31■■□□□ 1.96
GRAMD1A-214ENST00000603907 PHF14O94880 888 aa27.3■■□□□ 1.96
GRAMD1A-214ENST00000603907 DCTN1Q14203 1278 aa27.3■■□□□ 1.96
GRAMD1A-214ENST00000603907 TRIM35Q9UPQ4 493 aa27.3■■□□□ 1.96
GRAMD1A-214ENST00000603907 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.28■■□□□ 1.96
GRAMD1A-214ENST00000603907 CEP350Q5VT06 3117 aa27.27■■□□□ 1.96
GRAMD1A-214ENST00000603907 SSFA2P28290 1259 aa27.27■■□□□ 1.96
GRAMD1A-214ENST00000603907 TAF7Q15545 349 aaPredicted RBP27.27■■□□□ 1.96
GRAMD1A-214ENST00000603907 ZNF526Q8TF50 670 aaPredicted RBP27.27■■□□□ 1.96
GRAMD1A-214ENST00000603907 ATG3Q9NT62 314 aa27.27■■□□□ 1.96
GRAMD1A-214ENST00000603907 CALD1Q05682 793 aaKnown RBP27.26■■□□□ 1.95
GRAMD1A-214ENST00000603907 ASAP1Q9ULH1 1129 aa27.26■■□□□ 1.95
GRAMD1A-214ENST00000603907 SIPA1L3O60292 1781 aaPredicted RBP27.26■■□□□ 1.95
GRAMD1A-214ENST00000603907 HSPA6P17066 643 aa27.25■■□□□ 1.95
GRAMD1A-214ENST00000603907 BABAM1Q9NWV8 329 aa27.25■■□□□ 1.95
GRAMD1A-214ENST00000603907 BTBD11A6QL63 1104 aa27.24■■□□□ 1.95
GRAMD1A-214ENST00000603907 AMIGO3Q86WK7 504 aa27.24■■□□□ 1.95
GRAMD1A-214ENST00000603907 LOC102724428A0A0B4J2F2 783 aa27.23■■□□□ 1.95
GRAMD1A-214ENST00000603907 SIK1P57059 783 aa27.23■■□□□ 1.95
GRAMD1A-214ENST00000603907 THUMPD2Q9BTF0 503 aaKnown RBP27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms