RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 ONECUT3O60422 494 aaPredicted RBP24.03■■□□□ 1.44
SSBP4-212ENST00000601919 EXOSC9Q06265 439 aaKnown RBP24.02■■□□□ 1.44
SSBP4-212ENST00000601919 RCAN3Q9UKA8 241 aa24.02■■□□□ 1.44
SSBP4-212ENST00000601919 KDM3BQ7LBC6 1761 aa24.01■■□□□ 1.43
SSBP4-212ENST00000601919 RBM6P78332 1123 aaKnown RBP24■■□□□ 1.43
SSBP4-212ENST00000601919 NFATC2IPQ8NCF5 419 aa24■■□□□ 1.43
SSBP4-212ENST00000601919 MIS18AQ9NYP9 233 aa24■■□□□ 1.43
SSBP4-212ENST00000601919 ZNF428Q96B54 188 aa23.99■■□□□ 1.43
SSBP4-212ENST00000601919 TOGARAM1Q9Y4F4 1720 aa23.98■■□□□ 1.43
SSBP4-212ENST00000601919 SOS1Q07889 1333 aaPredicted RBP23.97■■□□□ 1.43
SSBP4-212ENST00000601919 SEPT12Q8IYM1 358 aa23.97■■□□□ 1.43
SSBP4-212ENST00000601919 MARCH10Q8NA82 808 aaPredicted RBP23.97■■□□□ 1.43
SSBP4-212ENST00000601919 KAT6BQ8WYB5 2073 aa23.97■■□□□ 1.43
SSBP4-212ENST00000601919 ITGB4P16144 1822 aa23.96■■□□□ 1.43
SSBP4-212ENST00000601919 TMOD3Q9NYL9 352 aa23.96■■□□□ 1.43
SSBP4-212ENST00000601919 TWISTNBQ3B726 338 aaPredicted RBP23.95■■□□□ 1.42
SSBP4-212ENST00000601919 CHMP4AQ9BY43 222 aa23.95■■□□□ 1.42
SSBP4-212ENST00000601919 DOT1LQ8TEK3 1739 aa23.95■■□□□ 1.42
SSBP4-212ENST00000601919 TTC5Q8N0Z6 440 aa23.94■■□□□ 1.42
SSBP4-212ENST00000601919 RXRBP28702 533 aa23.93■■□□□ 1.42
SSBP4-212ENST00000601919 ZNF790Q6PG37 636 aa23.93■■□□□ 1.42
SSBP4-212ENST00000601919 C8orf58Q8NAV2 365 aa23.93■■□□□ 1.42
SSBP4-212ENST00000601919 EIF4A1P60842 406 aaKnown RBP23.92■■□□□ 1.42
SSBP4-212ENST00000601919 SUPT16HQ9Y5B9 1047 aaKnown RBP23.92■■□□□ 1.42
SSBP4-212ENST00000601919 VAMP4O75379 141 aa23.91■■□□□ 1.42
SSBP4-212ENST00000601919 HOXB7P09629 217 aa23.91■■□□□ 1.42
SSBP4-212ENST00000601919 RARSP54136 660 aaKnown RBP23.9■■□□□ 1.42
SSBP4-212ENST00000601919 ALDH1L2Q3SY69 923 aa23.9■■□□□ 1.42
SSBP4-212ENST00000601919 TSPYL6Q8N831 410 aa23.9■■□□□ 1.42
SSBP4-212ENST00000601919 BCL9O00512 1426 aa23.9■■□□□ 1.42
SSBP4-212ENST00000601919 PAPPAQ13219 1627 aa23.89■■□□□ 1.42
SSBP4-212ENST00000601919 ELL2O00472 640 aaPredicted RBP23.89■■□□□ 1.41
SSBP4-212ENST00000601919 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.89■■□□□ 1.41
SSBP4-212ENST00000601919 SYTL4Q96C24 671 aaPredicted RBP23.89■■□□□ 1.41
SSBP4-212ENST00000601919 PRIM1P49642 420 aaKnown RBP23.88■■□□□ 1.41
SSBP4-212ENST00000601919 FMNL2Q96PY5 1086 aa23.88■■□□□ 1.41
SSBP4-212ENST00000601919 KCNQ3O43525 872 aa23.87■■□□□ 1.41
SSBP4-212ENST00000601919 SLC39A6Q13433 755 aa23.87■■□□□ 1.41
SSBP4-212ENST00000601919 ILDR1Q86SU0 546 aaPredicted RBP23.87■■□□□ 1.41
SSBP4-212ENST00000601919 PIGBQ92521 554 aa23.87■■□□□ 1.41
SSBP4-212ENST00000601919 BRWD3Q6RI45 1802 aa23.87■■□□□ 1.41
SSBP4-212ENST00000601919 UBR2Q8IWV8 1755 aa23.86■■□□□ 1.41
SSBP4-212ENST00000601919 KRT24Q2M2I5 525 aa23.86■■□□□ 1.41
SSBP4-212ENST00000601919 KRT27Q7Z3Y8 459 aa23.86■■□□□ 1.41
SSBP4-212ENST00000601919 RGS17Q9UGC6 210 aaPredicted RBP23.86■■□□□ 1.41
SSBP4-212ENST00000601919 RNF123Q5XPI4 1314 aa23.85■■□□□ 1.41
SSBP4-212ENST00000601919 NEFLP07196 543 aa23.85■■□□□ 1.41
SSBP4-212ENST00000601919 SMC4Q9NTJ3 1288 aa23.85■■□□□ 1.41
SSBP4-212ENST00000601919 HEG1Q9ULI3 1381 aa23.85■■□□□ 1.41
SSBP4-212ENST00000601919 CACNA1FO60840 1977 aa23.85■■□□□ 1.41
SSBP4-212ENST00000601919 ACSBG1Q96GR2 724 aa23.84■■□□□ 1.41
SSBP4-212ENST00000601919 GIGYF1O75420 1035 aaPredicted RBP23.83■■□□□ 1.41
SSBP4-212ENST00000601919 RRP1P56182 461 aaKnown RBP23.83■■□□□ 1.41
SSBP4-212ENST00000601919 CCDC30Q5VVM6 783 aa23.83■■□□□ 1.41
SSBP4-212ENST00000601919 SSH1Q8WYL5 1049 aa23.83■■□□□ 1.41
SSBP4-212ENST00000601919 NHSQ6T4R5 1651 aa23.83■■□□□ 1.4
SSBP4-212ENST00000601919 SNRPA1P09661 255 aaKnown RBP23.82■■□□□ 1.4
SSBP4-212ENST00000601919 FAM196AQ6ZSG2 479 aa23.82■■□□□ 1.4
SSBP4-212ENST00000601919 ZNF496Q96IT1 587 aaPredicted RBP23.82■■□□□ 1.4
SSBP4-212ENST00000601919 STK31Q9BXU1 1019 aa23.82■■□□□ 1.4
SSBP4-212ENST00000601919 BCAR3O75815 825 aa23.81■■□□□ 1.4
SSBP4-212ENST00000601919 CANXP27824 592 aaKnown RBP23.81■■□□□ 1.4
SSBP4-212ENST00000601919 BRPF1P55201 1214 aaPredicted RBP23.81■■□□□ 1.4
SSBP4-212ENST00000601919 POTEAQ6S8J7 498 aa23.81■■□□□ 1.4
SSBP4-212ENST00000601919 SMARCC1Q92922 1105 aaPredicted RBP23.81■■□□□ 1.4
SSBP4-212ENST00000601919 ATG3Q9NT62 314 aa23.81■■□□□ 1.4
SSBP4-212ENST00000601919 SBF2Q86WG5 1849 aa23.81■■□□□ 1.4
SSBP4-212ENST00000601919 KIF16BQ96L93 1317 aa23.81■■□□□ 1.4
SSBP4-212ENST00000601919 KCPQ6ZWJ8 1503 aa23.8■■□□□ 1.4
SSBP4-212ENST00000601919 HDGFL1Q5TGJ6 251 aa23.8■■□□□ 1.4
SSBP4-212ENST00000601919 ASAP1Q9ULH1 1129 aa23.8■■□□□ 1.4
SSBP4-212ENST00000601919 IPO8O15397 1037 aaKnown RBP23.79■■□□□ 1.4
SSBP4-212ENST00000601919 VSIG10Q8N0Z9 540 aa23.79■■□□□ 1.4
SSBP4-212ENST00000601919 BCL2L13Q9BXK5 485 aa23.79■■□□□ 1.4
SSBP4-212ENST00000601919 LAMB4A4D0S4 1761 aa23.78■■□□□ 1.4
SSBP4-212ENST00000601919 TEX13AQ9BXU3 409 aaPredicted RBP23.78■■□□□ 1.4
SSBP4-212ENST00000601919 C5P01031 1676 aa23.77■■□□□ 1.4
SSBP4-212ENST00000601919 PTCD1O75127 700 aaKnown RBP23.77■■□□□ 1.4
SSBP4-212ENST00000601919 MRPL50Q8N5N7 158 aaKnown RBP23.77■■□□□ 1.4
SSBP4-212ENST00000601919 RGS12O14924 1447 aa23.76■■□□□ 1.39
SSBP4-212ENST00000601919 MS4A1P11836 297 aa23.76■■□□□ 1.39
SSBP4-212ENST00000601919 EIF2S2P20042 333 aaKnown RBP23.76■■□□□ 1.39
SSBP4-212ENST00000601919 FRAT1Q92837 279 aaPredicted RBP23.76■■□□□ 1.39
SSBP4-212ENST00000601919 KCNQ2O43526 872 aa23.75■■□□□ 1.39
SSBP4-212ENST00000601919 FAM182BQ5T319 152 aa23.75■■□□□ 1.39
SSBP4-212ENST00000601919 ZKSCAN2Q63HK3 967 aa23.75■■□□□ 1.39
SSBP4-212ENST00000601919 BTAF1O14981 1849 aa23.75■■□□□ 1.39
SSBP4-212ENST00000601919 RBM42Q9BTD8 480 aaKnown RBP23.74■■□□□ 1.39
SSBP4-212ENST00000601919 BCL11BQ9C0K0 894 aaPredicted RBP23.74■■□□□ 1.39
SSBP4-212ENST00000601919 TCERG1O14776 1098 aaKnown RBP23.73■■□□□ 1.39
SSBP4-212ENST00000601919 SLC4A2P04920 1241 aa23.73■■□□□ 1.39
SSBP4-212ENST00000601919 ARHGAP45Q92619 1136 aa23.73■■□□□ 1.39
SSBP4-212ENST00000601919 DBF4Q9UBU7 674 aaPredicted RBP23.73■■□□□ 1.39
SSBP4-212ENST00000601919 NECTIN2Q92692 538 aa23.72■■□□□ 1.39
SSBP4-212ENST00000601919 NOB1Q9ULX3 412 aaKnown RBP23.72■■□□□ 1.39
SSBP4-212ENST00000601919 ERBB4Q15303 1308 aa23.72■■□□□ 1.39
SSBP4-212ENST00000601919 PALLDQ8WX93 1383 aa23.72■■□□□ 1.39
SSBP4-212ENST00000601919 PTPRCP08575 1304 aa23.71■■□□□ 1.39
SSBP4-212ENST00000601919 PLIN1O60240 522 aa23.71■■□□□ 1.39
SSBP4-212ENST00000601919 ZNF831Q5JPB2 1677 aa23.7■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms