RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 CFAP44Q96MT7 982 aa26.68■■□□□ 1.86
PNKP-215ENST00000600910 IFT57Q9NWB7 429 aa26.68■■□□□ 1.86
PNKP-215ENST00000600910 ITGB4P16144 1822 aa26.67■■□□□ 1.86
PNKP-215ENST00000600910 PRIM1P49642 420 aaKnown RBP26.67■■□□□ 1.86
PNKP-215ENST00000600910 TMOD3Q9NYL9 352 aa26.67■■□□□ 1.86
PNKP-215ENST00000600910 KAT6BQ8WYB5 2073 aa26.67■■□□□ 1.86
PNKP-215ENST00000600910 EP400Q96L91 3159 aa26.67■■□□□ 1.86
PNKP-215ENST00000600910 GNAI1P63096 354 aa26.66■■□□□ 1.86
PNKP-215ENST00000600910 ZNF853P0CG23 659 aa26.65■■□□□ 1.86
PNKP-215ENST00000600910 FAM196AQ6ZSG2 479 aa26.65■■□□□ 1.86
PNKP-215ENST00000600910 MIS18AQ9NYP9 233 aa26.65■■□□□ 1.86
PNKP-215ENST00000600910 E9PSI1 815 aa26.65■■□□□ 1.86
PNKP-215ENST00000600910 SLFN5Q08AF3 891 aa26.65■■□□□ 1.86
PNKP-215ENST00000600910 BTBD11A6QL63 1104 aa26.64■■□□□ 1.85
PNKP-215ENST00000600910 CHL1O00533 1208 aa26.64■■□□□ 1.85
PNKP-215ENST00000600910 KCNQ2O43526 872 aa26.64■■□□□ 1.85
PNKP-215ENST00000600910 PIGBQ92521 554 aa26.63■■□□□ 1.85
PNKP-215ENST00000600910 TSPYL4Q9UJ04 414 aa26.63■■□□□ 1.85
PNKP-215ENST00000600910 SBF2Q86WG5 1849 aa26.62■■□□□ 1.85
PNKP-215ENST00000600910 TSR2Q969E8 191 aaKnown RBP26.62■■□□□ 1.85
PNKP-215ENST00000600910 MYH16Q9H6N6 1097 aa26.62■■□□□ 1.85
PNKP-215ENST00000600910 MBIPQ9NS73 344 aa26.62■■□□□ 1.85
PNKP-215ENST00000600910 NHSQ6T4R5 1651 aa26.62■■□□□ 1.85
PNKP-215ENST00000600910 BABAM1Q9NWV8 329 aa26.61■■□□□ 1.85
PNKP-215ENST00000600910 FANCIQ9NVI1 1328 aa26.61■■□□□ 1.85
PNKP-215ENST00000600910 KDM3BQ7LBC6 1761 aa26.6■■□□□ 1.85
PNKP-215ENST00000600910 SLC39A6Q13433 755 aa26.59■■□□□ 1.85
PNKP-215ENST00000600910 TRMT2AQ8IZ69 625 aaKnown RBP26.59■■□□□ 1.85
PNKP-215ENST00000600910 DUSP27Q5VZP5 1158 aa26.58■■□□□ 1.85
PNKP-215ENST00000600910 PTF1AQ7RTS3 328 aa26.58■■□□□ 1.85
PNKP-215ENST00000600910 PAPPAQ13219 1627 aa26.57■■□□□ 1.84
PNKP-215ENST00000600910 KCNQ3O43525 872 aa26.57■■□□□ 1.84
PNKP-215ENST00000600910 ZNF790Q6PG37 636 aa26.57■■□□□ 1.84
PNKP-215ENST00000600910 ASAP1Q9ULH1 1129 aa26.56■■□□□ 1.84
PNKP-215ENST00000600910 TRIM37O94972 964 aa26.54■■□□□ 1.84
PNKP-215ENST00000600910 TTC5Q8N0Z6 440 aa26.54■■□□□ 1.84
PNKP-215ENST00000600910 BCL11BQ9C0K0 894 aaPredicted RBP26.54■■□□□ 1.84
PNKP-215ENST00000600910 ATG3Q9NT62 314 aa26.54■■□□□ 1.84
PNKP-215ENST00000600910 BTAF1O14981 1849 aa26.54■■□□□ 1.84
PNKP-215ENST00000600910 EIF4A1P60842 406 aaKnown RBP26.51■■□□□ 1.83
PNKP-215ENST00000600910 UBR2Q8IWV8 1755 aa26.51■■□□□ 1.83
PNKP-215ENST00000600910 EXOSC9Q06265 439 aaKnown RBP26.5■■□□□ 1.83
PNKP-215ENST00000600910 KRT24Q2M2I5 525 aa26.5■■□□□ 1.83
PNKP-215ENST00000600910 ZNF496Q96IT1 587 aaPredicted RBP26.5■■□□□ 1.83
PNKP-215ENST00000600910 KCPQ6ZWJ8 1503 aa26.5■■□□□ 1.83
PNKP-215ENST00000600910 PTCD1O75127 700 aaKnown RBP26.48■■□□□ 1.83
PNKP-215ENST00000600910 C8orf58Q8NAV2 365 aa26.48■■□□□ 1.83
PNKP-215ENST00000600910 FMNL2Q96PY5 1086 aa26.48■■□□□ 1.83
PNKP-215ENST00000600910 PALLDQ8WX93 1383 aa26.48■■□□□ 1.83
PNKP-215ENST00000600910 SMARCC1Q92922 1105 aaPredicted RBP26.47■■□□□ 1.83
PNKP-215ENST00000600910 TSPYL6Q8N831 410 aa26.47■■□□□ 1.83
PNKP-215ENST00000600910 ELL2O00472 640 aaPredicted RBP26.46■■□□□ 1.83
PNKP-215ENST00000600910 RBM42Q9BTD8 480 aaKnown RBP26.46■■□□□ 1.83
PNKP-215ENST00000600910 HEG1Q9ULI3 1381 aa26.45■■□□□ 1.83
PNKP-215ENST00000600910 TWISTNBQ3B726 338 aaPredicted RBP26.43■■□□□ 1.82
PNKP-215ENST00000600910 TNS1Q9HBL0 1735 aaKnown RBP26.43■■□□□ 1.82
PNKP-215ENST00000600910 GIGYF1O75420 1035 aaPredicted RBP26.43■■□□□ 1.82
PNKP-215ENST00000600910 PRAMEF22A3QJZ6 481 aa26.41■■□□□ 1.82
PNKP-215ENST00000600910 APBA3O96018 575 aa26.41■■□□□ 1.82
PNKP-215ENST00000600910 SNRPA1P09661 255 aaKnown RBP26.41■■□□□ 1.82
PNKP-215ENST00000600910 SLC4A9Q96Q91 983 aa26.41■■□□□ 1.82
PNKP-215ENST00000600910 C5P01031 1676 aa26.4■■□□□ 1.82
PNKP-215ENST00000600910 LOC102724428A0A0B4J2F2 783 aa26.4■■□□□ 1.82
PNKP-215ENST00000600910 SIK1P57059 783 aa26.4■■□□□ 1.82
PNKP-215ENST00000600910 VAMP4O75379 141 aa26.39■■□□□ 1.82
PNKP-215ENST00000600910 VSIG10Q8N0Z9 540 aa26.39■■□□□ 1.82
PNKP-215ENST00000600910 LY75O60449 1722 aa26.39■■□□□ 1.82
PNKP-215ENST00000600910 HOXB7P09629 217 aa26.39■■□□□ 1.81
PNKP-215ENST00000600910 SOS1Q07889 1333 aaPredicted RBP26.38■■□□□ 1.81
PNKP-215ENST00000600910 CT47B1P0C2W7 299 aaPredicted RBP26.38■■□□□ 1.81
PNKP-215ENST00000600910 ATP6V1AP38606 617 aa26.37■■□□□ 1.81
PNKP-215ENST00000600910 TJP1Q07157 1748 aa26.36■■□□□ 1.81
PNKP-215ENST00000600910 PLSCR1O15162 318 aa26.36■■□□□ 1.81
PNKP-215ENST00000600910 USP16Q9Y5T5 823 aa26.36■■□□□ 1.81
PNKP-215ENST00000600910 ZNF831Q5JPB2 1677 aa26.35■■□□□ 1.81
PNKP-215ENST00000600910 LAMB4A4D0S4 1761 aa26.35■■□□□ 1.81
PNKP-215ENST00000600910 EIF2S2P20042 333 aaKnown RBP26.35■■□□□ 1.81
PNKP-215ENST00000600910 DNAJC10Q8IXB1 793 aa26.35■■□□□ 1.81
PNKP-215ENST00000600910 KCNQ4P56696 695 aa26.34■■□□□ 1.81
PNKP-215ENST00000600910 SF3B2Q13435 895 aaKnown RBP26.34■■□□□ 1.81
PNKP-215ENST00000600910 HDGFL1Q5TGJ6 251 aa26.34■■□□□ 1.81
PNKP-215ENST00000600910 NECTIN2Q92692 538 aa26.34■■□□□ 1.81
PNKP-215ENST00000600910 TEX13AQ9BXU3 409 aaPredicted RBP26.34■■□□□ 1.81
PNKP-215ENST00000600910 CCNL1Q9UK58 526 aaPredicted RBP26.34■■□□□ 1.81
PNKP-215ENST00000600910 CICQ96RK0 1608 aaPredicted RBP26.34■■□□□ 1.81
PNKP-215ENST00000600910 CENPBP07199 599 aaPredicted RBP26.33■■□□□ 1.81
PNKP-215ENST00000600910 ITPK1Q13572 414 aa26.33■■□□□ 1.81
PNKP-215ENST00000600910 ILDR2Q71H61 639 aa26.33■■□□□ 1.81
PNKP-215ENST00000600910 ZNF428Q96B54 188 aa26.32■■□□□ 1.8
PNKP-215ENST00000600910 RGPD3A6NKT7 1758 aaPredicted RBP26.3■■□□□ 1.8
PNKP-215ENST00000600910 RGPD4Q7Z3J3 1758 aa26.3■■□□□ 1.8
PNKP-215ENST00000600910 TCERG1O14776 1098 aaKnown RBP26.3■■□□□ 1.8
PNKP-215ENST00000600910 TXNRD1Q16881 649 aa26.3■■□□□ 1.8
PNKP-215ENST00000600910 CCDC30Q5VVM6 783 aa26.3■■□□□ 1.8
PNKP-215ENST00000600910 CCDC125Q86Z20 511 aa26.3■■□□□ 1.8
PNKP-215ENST00000600910 RCAN3Q9UKA8 241 aa26.3■■□□□ 1.8
PNKP-215ENST00000600910 STARD3NLO95772 234 aa26.29■■□□□ 1.8
PNKP-215ENST00000600910 RARSP54136 660 aaKnown RBP26.29■■□□□ 1.8
PNKP-215ENST00000600910 SLC27A3Q5K4L6 730 aa26.29■■□□□ 1.8
PNKP-215ENST00000600910 PROM2Q8N271 834 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms