RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 SPINK5Q9NQ38 1064 aaPredicted RBP16.43■□□□□ 0.22
ZNF548-210ENST00000600442 OVOS2A0A0G2JMS6 1433 aa16.43■□□□□ 0.22
ZNF548-210ENST00000600442 COL18A1P39060 1754 aa16.42■□□□□ 0.22
ZNF548-210ENST00000600442 HSP90AB1P08238 724 aaKnown RBP16.42■□□□□ 0.22
ZNF548-210ENST00000600442 MS4A1P11836 297 aa16.42■□□□□ 0.22
ZNF548-210ENST00000600442 DDB1Q16531 1140 aa16.42■□□□□ 0.22
ZNF548-210ENST00000600442 CARD10Q9BWT7 1032 aa16.42■□□□□ 0.22
ZNF548-210ENST00000600442 NCAPD2Q15021 1401 aa16.42■□□□□ 0.22
ZNF548-210ENST00000600442 LRRC37A3O60309 1634 aa16.41■□□□□ 0.22
ZNF548-210ENST00000600442 RGPD5Q99666 1765 aa16.41■□□□□ 0.22
ZNF548-210ENST00000600442 PTF1AQ7RTS3 328 aa16.41■□□□□ 0.22
ZNF548-210ENST00000600442 MCM10Q7L590 875 aa16.4■□□□□ 0.22
ZNF548-210ENST00000600442 PELP1Q8IZL8 1130 aaKnown RBP16.4■□□□□ 0.22
ZNF548-210ENST00000600442 TSR2Q969E8 191 aaKnown RBP16.4■□□□□ 0.22
ZNF548-210ENST00000600442 BCL11BQ9C0K0 894 aaPredicted RBP16.4■□□□□ 0.22
ZNF548-210ENST00000600442 WNK3Q9BYP7 1800 aa16.4■□□□□ 0.22
ZNF548-210ENST00000600442 FAM208AQ9UK61 1670 aaKnown RBP16.4■□□□□ 0.22
ZNF548-210ENST00000600442 CASZ1Q86V15 1759 aa16.39■□□□□ 0.21
ZNF548-210ENST00000600442 ZNF853P0CG23 659 aa16.39■□□□□ 0.21
ZNF548-210ENST00000600442 EXOSC9Q06265 439 aaKnown RBP16.39■□□□□ 0.21
ZNF548-210ENST00000600442 TEFQ10587 303 aa16.39■□□□□ 0.21
ZNF548-210ENST00000600442 PROM2Q8N271 834 aa16.39■□□□□ 0.21
ZNF548-210ENST00000600442 THUMPD2Q9BTF0 503 aaKnown RBP16.39■□□□□ 0.21
ZNF548-210ENST00000600442 ANO8Q9HCE9 1232 aaPredicted RBP16.39■□□□□ 0.21
ZNF548-210ENST00000600442 CHL1O00533 1208 aa16.38■□□□□ 0.21
ZNF548-210ENST00000600442 IPO8O15397 1037 aaKnown RBP16.38■□□□□ 0.21
ZNF548-210ENST00000600442 TAF7Q15545 349 aaPredicted RBP16.38■□□□□ 0.21
ZNF548-210ENST00000600442 MARCH10Q8NA82 808 aaPredicted RBP16.38■□□□□ 0.21
ZNF548-210ENST00000600442 PDGFDQ9GZP0 370 aaPredicted RBP16.38■□□□□ 0.21
ZNF548-210ENST00000600442 TSPYL4Q9UJ04 414 aa16.38■□□□□ 0.21
ZNF548-210ENST00000600442 DCTN1Q14203 1278 aa16.37■□□□□ 0.21
ZNF548-210ENST00000600442 ALDH1L2Q3SY69 923 aa16.37■□□□□ 0.21
ZNF548-210ENST00000600442 IFNL2Q8IZJ0 200 aa16.37■□□□□ 0.21
ZNF548-210ENST00000600442 MBIPQ9NS73 344 aa16.37■□□□□ 0.21
ZNF548-210ENST00000600442 KAT6BQ8WYB5 2073 aa16.37■□□□□ 0.21
ZNF548-210ENST00000600442 SOS1Q07889 1333 aaPredicted RBP16.37■□□□□ 0.21
ZNF548-210ENST00000600442 IL2RBP14784 551 aa16.36■□□□□ 0.21
ZNF548-210ENST00000600442 RARSP54136 660 aaKnown RBP16.36■□□□□ 0.21
ZNF548-210ENST00000600442 ZBTB7AO95365 584 aa16.35■□□□□ 0.21
ZNF548-210ENST00000600442 CDCA7Q9BWT1 371 aaPredicted RBP16.35■□□□□ 0.21
ZNF548-210ENST00000600442 SMC4Q9NTJ3 1288 aa16.35■□□□□ 0.21
ZNF548-210ENST00000600442 UTRNP46939 3433 aa16.35■□□□□ 0.21
ZNF548-210ENST00000600442 TWISTNBQ3B726 338 aaPredicted RBP16.34■□□□□ 0.21
ZNF548-210ENST00000600442 ZCRB1Q8TBF4 217 aaKnown RBP16.34■□□□□ 0.21
ZNF548-210ENST00000600442 PPP4R2Q9NY27 417 aa16.34■□□□□ 0.21
ZNF548-210ENST00000600442 KIF16BQ96L93 1317 aa16.34■□□□□ 0.21
ZNF548-210ENST00000600442 PDE3AQ14432 1141 aa16.33■□□□□ 0.2
ZNF548-210ENST00000600442 IL17REQ8NFR9 667 aa16.33■□□□□ 0.2
ZNF548-210ENST00000600442 DCAF5Q96JK2 942 aa16.33■□□□□ 0.2
ZNF548-210ENST00000600442 ATF5Q9Y2D1 282 aaPredicted RBP16.33■□□□□ 0.2
ZNF548-210ENST00000600442 PCDH11XQ9BZA7 1347 aa16.33■□□□□ 0.2
ZNF548-210ENST00000600442 PCDH11YQ9BZA8 1340 aa16.33■□□□□ 0.2
ZNF548-210ENST00000600442 BCL9O00512 1426 aa16.33■□□□□ 0.2
ZNF548-210ENST00000600442 PTGER2P43116 358 aa16.32■□□□□ 0.2
ZNF548-210ENST00000600442 IRX6P78412 446 aaPredicted RBP16.32■□□□□ 0.2
ZNF548-210ENST00000600442 TXNRD1Q16881 649 aa16.32■□□□□ 0.2
ZNF548-210ENST00000600442 FRAT1Q92837 279 aaPredicted RBP16.32■□□□□ 0.2
ZNF548-210ENST00000600442 CEMIPQ8WUJ3 1361 aa16.31■□□□□ 0.2
ZNF548-210ENST00000600442 EXOC5O00471 708 aa16.31■□□□□ 0.2
ZNF548-210ENST00000600442 RNMTO43148 476 aaKnown RBP16.31■□□□□ 0.2
ZNF548-210ENST00000600442 PHKG2P15735 406 aa16.31■□□□□ 0.2
ZNF548-210ENST00000600442 AAMPQ13685 434 aa16.31■□□□□ 0.2
ZNF548-210ENST00000600442 ZKSCAN2Q63HK3 967 aa16.31■□□□□ 0.2
ZNF548-210ENST00000600442 STK32BQ9NY57 414 aa16.31■□□□□ 0.2
ZNF548-210ENST00000600442 CHD4Q14839 1912 aa16.31■□□□□ 0.2
ZNF548-210ENST00000600442 BTBD11A6QL63 1104 aa16.3■□□□□ 0.2
ZNF548-210ENST00000600442 BCAR3O75815 825 aa16.3■□□□□ 0.2
ZNF548-210ENST00000600442 MPRIPQ6WCQ1 1025 aa16.3■□□□□ 0.2
ZNF548-210ENST00000600442 CHMP4BQ9H444 224 aaKnown RBP16.3■□□□□ 0.2
ZNF548-210ENST00000600442 SLC15A2Q16348 729 aa16.29■□□□□ 0.2
ZNF548-210ENST00000600442 FTSJ3Q8IY81 847 aaKnown RBP16.29■□□□□ 0.2
ZNF548-210ENST00000600442 PLIN1O60240 522 aa16.28■□□□□ 0.2
ZNF548-210ENST00000600442 VAMP4O75379 141 aa16.28■□□□□ 0.2
ZNF548-210ENST00000600442 BRPF1P55201 1214 aaPredicted RBP16.28■□□□□ 0.2
ZNF548-210ENST00000600442 STK31Q9BXU1 1019 aa16.28■□□□□ 0.2
ZNF548-210ENST00000600442 HOXB7P09629 217 aa16.27■□□□□ 0.2
ZNF548-210ENST00000600442 CCDC30Q5VVM6 783 aa16.27■□□□□ 0.2
ZNF548-210ENST00000600442 SSH1Q8WYL5 1049 aa16.27■□□□□ 0.2
ZNF548-210ENST00000600442 ARHGAP45Q92619 1136 aa16.27■□□□□ 0.2
ZNF548-210ENST00000600442 SYT17Q9BSW7 474 aa16.27■□□□□ 0.2
ZNF548-210ENST00000600442 FHDC1Q9C0D6 1143 aaPredicted RBP16.27■□□□□ 0.2
ZNF548-210ENST00000600442 LGR6Q9HBX8 967 aa16.27■□□□□ 0.2
ZNF548-210ENST00000600442 MEGF6O75095 1541 aa16.26■□□□□ 0.19
ZNF548-210ENST00000600442 DLG5Q8TDM6 1919 aa16.26■□□□□ 0.19
ZNF548-210ENST00000600442 ELL2O00472 640 aaPredicted RBP16.26■□□□□ 0.19
ZNF548-210ENST00000600442 CABP4P57796 275 aa16.26■□□□□ 0.19
ZNF548-210ENST00000600442 C8orf58Q8NAV2 365 aa16.26■□□□□ 0.19
ZNF548-210ENST00000600442 ZNF784Q8NCA9 323 aaPredicted RBP16.26■□□□□ 0.19
ZNF548-210ENST00000600442 MTFR1LQ9H019 292 aa16.26■□□□□ 0.19
ZNF548-210ENST00000600442 ERVV-2B6SEH9 535 aa16.25■□□□□ 0.19
ZNF548-210ENST00000600442 TTC5Q8N0Z6 440 aa16.25■□□□□ 0.19
ZNF548-210ENST00000600442 CCDC136Q96JN2 1154 aa16.25■□□□□ 0.19
ZNF548-210ENST00000600442 BCL2L13Q9BXK5 485 aa16.25■□□□□ 0.19
ZNF548-210ENST00000600442 API5Q9BZZ5 524 aaKnown RBP16.25■□□□□ 0.19
ZNF548-210ENST00000600442 SLC52A2Q9HAB3 445 aa16.25■□□□□ 0.19
ZNF548-210ENST00000600442 MIS18AQ9NYP9 233 aa16.25■□□□□ 0.19
ZNF548-210ENST00000600442 NHSQ6T4R5 1651 aa16.24■□□□□ 0.19
ZNF548-210ENST00000600442 ATF7IPQ6VMQ6 1270 aa16.24■□□□□ 0.19
ZNF548-210ENST00000600442 DZIP1LQ8IYY4 767 aaKnown RBP16.24■□□□□ 0.19
ZNF548-210ENST00000600442 DDX54Q8TDD1 881 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms