RNA–Protein interactions for RNA: ENST00000599642.1

KHSRP-211, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 2

Gene KHSRP, Length 428 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-211ENST00000599642 MYH16Q9H6N6 1097 aa24.2■■□□□ 1.46
KHSRP-211ENST00000599642 PAPPAQ13219 1627 aa24.2■■□□□ 1.46
KHSRP-211ENST00000599642 SALL2Q9Y467 1007 aaPredicted RBP24.19■■□□□ 1.46
KHSRP-211ENST00000599642 CHL1O00533 1208 aa24.18■■□□□ 1.46
KHSRP-211ENST00000599642 DCTN1Q14203 1278 aa24.18■■□□□ 1.46
KHSRP-211ENST00000599642 SLFN5Q08AF3 891 aa24.17■■□□□ 1.46
KHSRP-211ENST00000599642 TRMT2AQ8IZ69 625 aaKnown RBP24.17■■□□□ 1.46
KHSRP-211ENST00000599642 TMOD3Q9NYL9 352 aa24.17■■□□□ 1.46
KHSRP-211ENST00000599642 UBR2Q8IWV8 1755 aa24.16■■□□□ 1.46
KHSRP-211ENST00000599642 SOS1Q07889 1333 aaPredicted RBP24.16■■□□□ 1.46
KHSRP-211ENST00000599642 ZNF831Q5JPB2 1677 aa24.15■■□□□ 1.46
KHSRP-211ENST00000599642 NFATC2IPQ8NCF5 419 aa24.15■■□□□ 1.46
KHSRP-211ENST00000599642 YTHDC1Q96MU7 727 aaKnown RBP24.15■■□□□ 1.46
KHSRP-211ENST00000599642 HMGB2P26583 209 aaKnown RBP24.14■■□□□ 1.45
KHSRP-211ENST00000599642 BTBD11A6QL63 1104 aa24.13■■□□□ 1.45
KHSRP-211ENST00000599642 THUMPD2Q9BTF0 503 aaKnown RBP24.13■■□□□ 1.45
KHSRP-211ENST00000599642 CHMP4AQ9BY43 222 aa24.13■■□□□ 1.45
KHSRP-211ENST00000599642 CT47B1P0C2W7 299 aaPredicted RBP24.12■■□□□ 1.45
KHSRP-211ENST00000599642 BTAF1O14981 1849 aa24.12■■□□□ 1.45
KHSRP-211ENST00000599642 CICQ96RK0 1608 aaPredicted RBP24.11■■□□□ 1.45
KHSRP-211ENST00000599642 SMARCC1Q92922 1105 aaPredicted RBP24.11■■□□□ 1.45
KHSRP-211ENST00000599642 BCL11BQ9C0K0 894 aaPredicted RBP24.11■■□□□ 1.45
KHSRP-211ENST00000599642 TSPYL4Q9UJ04 414 aa24.11■■□□□ 1.45
KHSRP-211ENST00000599642 PRIM1P49642 420 aaKnown RBP24.1■■□□□ 1.45
KHSRP-211ENST00000599642 ZNF790Q6PG37 636 aa24.1■■□□□ 1.45
KHSRP-211ENST00000599642 RGPD3A6NKT7 1758 aaPredicted RBP24.1■■□□□ 1.45
KHSRP-211ENST00000599642 RGPD4Q7Z3J3 1758 aa24.1■■□□□ 1.45
KHSRP-211ENST00000599642 MBIPQ9NS73 344 aa24.09■■□□□ 1.45
KHSRP-211ENST00000599642 CACNA1FO60840 1977 aa24.09■■□□□ 1.45
KHSRP-211ENST00000599642 HOXB7P09629 217 aa24.08■■□□□ 1.45
KHSRP-211ENST00000599642 DUSP27Q5VZP5 1158 aa24.08■■□□□ 1.45
KHSRP-211ENST00000599642 TTC5Q8N0Z6 440 aa24.08■■□□□ 1.45
KHSRP-211ENST00000599642 PIGBQ92521 554 aa24.08■■□□□ 1.45
KHSRP-211ENST00000599642 ZNF428Q96B54 188 aa24.08■■□□□ 1.45
KHSRP-211ENST00000599642 FANCIQ9NVI1 1328 aa24.08■■□□□ 1.44
KHSRP-211ENST00000599642 LY75O60449 1722 aa24.07■■□□□ 1.44
KHSRP-211ENST00000599642 HEG1Q9ULI3 1381 aa24.06■■□□□ 1.44
KHSRP-211ENST00000599642 VSIG10Q8N0Z9 540 aa24.06■■□□□ 1.44
KHSRP-211ENST00000599642 LAS1LQ9Y4W2 734 aaKnown RBP24.06■■□□□ 1.44
KHSRP-211ENST00000599642 SENP3-EIF4A1A0A087X0R7 540 aa24.05■■□□□ 1.44
KHSRP-211ENST00000599642 SYTL4Q96C24 671 aaPredicted RBP24.05■■□□□ 1.44
KHSRP-211ENST00000599642 SPINK5Q9NQ38 1064 aaPredicted RBP24.05■■□□□ 1.44
KHSRP-211ENST00000599642 CDCA7LQ96GN5 454 aa24.04■■□□□ 1.44
KHSRP-211ENST00000599642 ACSBG1Q96GR2 724 aa24.04■■□□□ 1.44
KHSRP-211ENST00000599642 FMNL2Q96PY5 1086 aa24.04■■□□□ 1.44
KHSRP-211ENST00000599642 KCPQ6ZWJ8 1503 aa24.04■■□□□ 1.44
KHSRP-211ENST00000599642 TNS1Q9HBL0 1735 aaKnown RBP24.04■■□□□ 1.44
KHSRP-211ENST00000599642 LAMB4A4D0S4 1761 aa24.03■■□□□ 1.44
KHSRP-211ENST00000599642 EIF4A1P60842 406 aaKnown RBP24.03■■□□□ 1.44
KHSRP-211ENST00000599642 CCDC125Q86Z20 511 aa24.03■■□□□ 1.44
KHSRP-211ENST00000599642 TEX13AQ9BXU3 409 aaPredicted RBP24.03■■□□□ 1.44
KHSRP-211ENST00000599642 ATG3Q9NT62 314 aa24.02■■□□□ 1.44
KHSRP-211ENST00000599642 KCNQ2O43526 872 aa24■■□□□ 1.43
KHSRP-211ENST00000599642 PLSCR1O15162 318 aa23.99■■□□□ 1.43
KHSRP-211ENST00000599642 FAM182BQ5T319 152 aa23.99■■□□□ 1.43
KHSRP-211ENST00000599642 TSR2Q969E8 191 aaKnown RBP23.99■■□□□ 1.43
KHSRP-211ENST00000599642 SNRPA1P09661 255 aaKnown RBP23.98■■□□□ 1.43
KHSRP-211ENST00000599642 MIS18AQ9NYP9 233 aa23.98■■□□□ 1.43
KHSRP-211ENST00000599642 ASAP1Q9ULH1 1129 aa23.98■■□□□ 1.43
KHSRP-211ENST00000599642 PALLDQ8WX93 1383 aa23.98■■□□□ 1.43
KHSRP-211ENST00000599642 GIGYF1O75420 1035 aaPredicted RBP23.97■■□□□ 1.43
KHSRP-211ENST00000599642 SLC39A6Q13433 755 aa23.97■■□□□ 1.43
KHSRP-211ENST00000599642 TRIM37O94972 964 aa23.96■■□□□ 1.43
KHSRP-211ENST00000599642 EXOSC9Q06265 439 aaKnown RBP23.96■■□□□ 1.43
KHSRP-211ENST00000599642 ZNF496Q96IT1 587 aaPredicted RBP23.96■■□□□ 1.43
KHSRP-211ENST00000599642 CENPBP07199 599 aaPredicted RBP23.95■■□□□ 1.42
KHSRP-211ENST00000599642 TWISTNBQ3B726 338 aaPredicted RBP23.95■■□□□ 1.42
KHSRP-211ENST00000599642 COL5A3P25940 1745 aaPredicted RBP23.95■■□□□ 1.42
KHSRP-211ENST00000599642 C5P01031 1676 aa23.95■■□□□ 1.42
KHSRP-211ENST00000599642 TAF1LQ8IZX4 1826 aa23.94■■□□□ 1.42
KHSRP-211ENST00000599642 ERBB4Q15303 1308 aa23.94■■□□□ 1.42
KHSRP-211ENST00000599642 TJP1Q07157 1748 aa23.94■■□□□ 1.42
KHSRP-211ENST00000599642 SLC27A3Q5K4L6 730 aa23.94■■□□□ 1.42
KHSRP-211ENST00000599642 LOC102724428A0A0B4J2F2 783 aa23.93■■□□□ 1.42
KHSRP-211ENST00000599642 KCNQ3O43525 872 aa23.93■■□□□ 1.42
KHSRP-211ENST00000599642 VAMP4O75379 141 aa23.93■■□□□ 1.42
KHSRP-211ENST00000599642 SIK1P57059 783 aa23.93■■□□□ 1.42
KHSRP-211ENST00000599642 ALDH1L2Q3SY69 923 aa23.93■■□□□ 1.42
KHSRP-211ENST00000599642 C8orf58Q8NAV2 365 aa23.92■■□□□ 1.42
KHSRP-211ENST00000599642 SF3B2Q13435 895 aaKnown RBP23.91■■□□□ 1.42
KHSRP-211ENST00000599642 RREB1Q92766 1687 aa23.9■■□□□ 1.42
KHSRP-211ENST00000599642 STARD3NLO95772 234 aa23.9■■□□□ 1.42
KHSRP-211ENST00000599642 BRPF1P55201 1214 aaPredicted RBP23.9■■□□□ 1.42
KHSRP-211ENST00000599642 CCDC30Q5VVM6 783 aa23.9■■□□□ 1.42
KHSRP-211ENST00000599642 PTCD1O75127 700 aaKnown RBP23.89■■□□□ 1.41
KHSRP-211ENST00000599642 RBM42Q9BTD8 480 aaKnown RBP23.89■■□□□ 1.41
KHSRP-211ENST00000599642 TSPYL6Q8N831 410 aa23.88■■□□□ 1.41
KHSRP-211ENST00000599642 EP400Q96L91 3159 aa23.88■■□□□ 1.41
KHSRP-211ENST00000599642 APBA3O96018 575 aa23.87■■□□□ 1.41
KHSRP-211ENST00000599642 ATP6V1AP38606 617 aa23.87■■□□□ 1.41
KHSRP-211ENST00000599642 PTF1AQ7RTS3 328 aa23.87■■□□□ 1.41
KHSRP-211ENST00000599642 BAG6P46379 1132 aa23.86■■□□□ 1.41
KHSRP-211ENST00000599642 RC3H1Q5TC82 1133 aaKnown RBP23.85■■□□□ 1.41
KHSRP-211ENST00000599642 HDGFL1Q5TGJ6 251 aa23.85■■□□□ 1.41
KHSRP-211ENST00000599642 STK31Q9BXU1 1019 aa23.85■■□□□ 1.41
KHSRP-211ENST00000599642 DBF4Q9UBU7 674 aaPredicted RBP23.85■■□□□ 1.41
KHSRP-211ENST00000599642 SLC4A9Q96Q91 983 aa23.84■■□□□ 1.41
KHSRP-211ENST00000599642 CCNL1Q9UK58 526 aaPredicted RBP23.84■■□□□ 1.41
KHSRP-211ENST00000599642 CNTNAP4Q9C0A0 1308 aa23.84■■□□□ 1.41
KHSRP-211ENST00000599642 RARSP54136 660 aaKnown RBP23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms