RNA–Protein interactions for RNA: ENST00000596957.1

ARHGEF1-214, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-214ENST00000596957 SMARCC1Q92922 1105 aaPredicted RBP19.52■□□□□ 0.72
ARHGEF1-214ENST00000596957 YTHDC1Q96MU7 727 aaKnown RBP19.52■□□□□ 0.72
ARHGEF1-214ENST00000596957 TSPYL4Q9UJ04 414 aa19.51■□□□□ 0.71
ARHGEF1-214ENST00000596957 TOGARAM1Q9Y4F4 1720 aa19.51■□□□□ 0.71
ARHGEF1-214ENST00000596957 NHSQ6T4R5 1651 aa19.5■□□□□ 0.71
ARHGEF1-214ENST00000596957 MRC1P22897 1456 aa19.5■□□□□ 0.71
ARHGEF1-214ENST00000596957 BAG6P46379 1132 aa19.5■□□□□ 0.71
ARHGEF1-214ENST00000596957 MIS18AQ9NYP9 233 aa19.5■□□□□ 0.71
ARHGEF1-214ENST00000596957 ASAP1Q9ULH1 1129 aa19.5■□□□□ 0.71
ARHGEF1-214ENST00000596957 SLC39A6Q13433 755 aa19.49■□□□□ 0.71
ARHGEF1-214ENST00000596957 WDR63Q8IWG1 891 aa19.49■□□□□ 0.71
ARHGEF1-214ENST00000596957 RBM42Q9BTD8 480 aaKnown RBP19.49■□□□□ 0.71
ARHGEF1-214ENST00000596957 PALLDQ8WX93 1383 aa19.48■□□□□ 0.71
ARHGEF1-214ENST00000596957 PTCD1O75127 700 aaKnown RBP19.48■□□□□ 0.71
ARHGEF1-214ENST00000596957 GNAI1P63096 354 aa19.48■□□□□ 0.71
ARHGEF1-214ENST00000596957 UPF1Q92900 1129 aaKnown RBP eCLIP19.48■□□□□ 0.71
ARHGEF1-214ENST00000596957 ATG3Q9NT62 314 aa19.48■□□□□ 0.71
ARHGEF1-214ENST00000596957 SCN11AQ9UI33 1791 aa19.47■□□□□ 0.71
ARHGEF1-214ENST00000596957 ADAMTS7Q9UKP4 1686 aa19.47■□□□□ 0.71
ARHGEF1-214ENST00000596957 ZNF790Q6PG37 636 aa19.47■□□□□ 0.71
ARHGEF1-214ENST00000596957 IFT57Q9NWB7 429 aa19.47■□□□□ 0.71
ARHGEF1-214ENST00000596957 CFAP44Q96MT7 982 aa19.46■□□□□ 0.71
ARHGEF1-214ENST00000596957 DLG5Q8TDM6 1919 aa19.46■□□□□ 0.71
ARHGEF1-214ENST00000596957 EN1Q05925 392 aaPredicted RBP19.45■□□□□ 0.7
ARHGEF1-214ENST00000596957 GOLGA2Q08379 1002 aa19.45■□□□□ 0.7
ARHGEF1-214ENST00000596957 BABAM1Q9NWV8 329 aa19.45■□□□□ 0.7
ARHGEF1-214ENST00000596957 IL16Q14005 1332 aa19.45■□□□□ 0.7
ARHGEF1-214ENST00000596957 EP400Q96L91 3159 aa19.44■□□□□ 0.7
ARHGEF1-214ENST00000596957 PLSCR1O15162 318 aa19.44■□□□□ 0.7
ARHGEF1-214ENST00000596957 FMNL2Q96PY5 1086 aa19.44■□□□□ 0.7
ARHGEF1-214ENST00000596957 MYH16Q9H6N6 1097 aa19.44■□□□□ 0.7
ARHGEF1-214ENST00000596957 CHL1O00533 1208 aa19.43■□□□□ 0.7
ARHGEF1-214ENST00000596957 KCNQ3O43525 872 aa19.43■□□□□ 0.7
ARHGEF1-214ENST00000596957 DEFB132Q7Z7B7 95 aa19.43■□□□□ 0.7
ARHGEF1-214ENST00000596957 CCNL1Q9UK58 526 aaPredicted RBP19.43■□□□□ 0.7
ARHGEF1-214ENST00000596957 SBF2Q86WG5 1849 aa19.42■□□□□ 0.7
ARHGEF1-214ENST00000596957 LOC102724428A0A0B4J2F2 783 aa19.42■□□□□ 0.7
ARHGEF1-214ENST00000596957 SIK1P57059 783 aa19.42■□□□□ 0.7
ARHGEF1-214ENST00000596957 TSR2Q969E8 191 aaKnown RBP19.42■□□□□ 0.7
ARHGEF1-214ENST00000596957 MBIPQ9NS73 344 aa19.42■□□□□ 0.7
ARHGEF1-214ENST00000596957 ZNF521Q96K83 1311 aa19.42■□□□□ 0.7
ARHGEF1-214ENST00000596957 BTAF1O14981 1849 aa19.41■□□□□ 0.7
ARHGEF1-214ENST00000596957 ATP6V1AP38606 617 aa19.41■□□□□ 0.7
ARHGEF1-214ENST00000596957 EZH2Q15910 746 aaKnown RBP19.41■□□□□ 0.7
ARHGEF1-214ENST00000596957 TXNRD1Q16881 649 aa19.41■□□□□ 0.7
ARHGEF1-214ENST00000596957 ZNF496Q96IT1 587 aaPredicted RBP19.41■□□□□ 0.7
ARHGEF1-214ENST00000596957 ZBED9Q6R2W3 1325 aa19.41■□□□□ 0.7
ARHGEF1-214ENST00000596957 ITGB4P16144 1822 aa19.41■□□□□ 0.7
ARHGEF1-214ENST00000596957 KAT6BQ8WYB5 2073 aa19.4■□□□□ 0.7
ARHGEF1-214ENST00000596957 E9PSI1 815 aa19.4■□□□□ 0.7
ARHGEF1-214ENST00000596957 ZNF853P0CG23 659 aa19.4■□□□□ 0.7
ARHGEF1-214ENST00000596957 TNS1Q9HBL0 1735 aaKnown RBP19.39■□□□□ 0.7
ARHGEF1-214ENST00000596957 KCNQ4P56696 695 aa19.39■□□□□ 0.69
ARHGEF1-214ENST00000596957 EIF4A1P60842 406 aaKnown RBP19.39■□□□□ 0.69
ARHGEF1-214ENST00000596957 SLC27A3Q5K4L6 730 aa19.39■□□□□ 0.69
ARHGEF1-214ENST00000596957 CAMKK2Q96RR4 588 aa19.38■□□□□ 0.69
ARHGEF1-214ENST00000596957 FANCIQ9NVI1 1328 aa19.38■□□□□ 0.69
ARHGEF1-214ENST00000596957 HEG1Q9ULI3 1381 aa19.37■□□□□ 0.69
ARHGEF1-214ENST00000596957 SNRPA1P09661 255 aaKnown RBP19.37■□□□□ 0.69
ARHGEF1-214ENST00000596957 HMGB2P26583 209 aaKnown RBP19.37■□□□□ 0.69
ARHGEF1-214ENST00000596957 CDCA7LQ96GN5 454 aa19.37■□□□□ 0.69
ARHGEF1-214ENST00000596957 SPINK5Q9NQ38 1064 aaPredicted RBP19.37■□□□□ 0.69
ARHGEF1-214ENST00000596957 VSIG10Q8N0Z9 540 aa19.36■□□□□ 0.69
ARHGEF1-214ENST00000596957 VIRMAQ69YN4 1812 aaKnown RBP19.36■□□□□ 0.69
ARHGEF1-214ENST00000596957 SIPA1L3O60292 1781 aaPredicted RBP19.36■□□□□ 0.69
ARHGEF1-214ENST00000596957 KCPQ6ZWJ8 1503 aa19.35■□□□□ 0.69
ARHGEF1-214ENST00000596957 SLFN5Q08AF3 891 aa19.35■□□□□ 0.69
ARHGEF1-214ENST00000596957 DNAJC10Q8IXB1 793 aa19.35■□□□□ 0.69
ARHGEF1-214ENST00000596957 TEX13AQ9BXU3 409 aaPredicted RBP19.35■□□□□ 0.69
ARHGEF1-214ENST00000596957 PAPPAQ13219 1627 aa19.35■□□□□ 0.69
ARHGEF1-214ENST00000596957 ELL2O00472 640 aaPredicted RBP19.34■□□□□ 0.69
ARHGEF1-214ENST00000596957 STARD3NLO95772 234 aa19.34■□□□□ 0.69
ARHGEF1-214ENST00000596957 KRT24Q2M2I5 525 aa19.34■□□□□ 0.69
ARHGEF1-214ENST00000596957 PROM2Q8N271 834 aa19.34■□□□□ 0.69
ARHGEF1-214ENST00000596957 SLC4A9Q96Q91 983 aa19.34■□□□□ 0.69
ARHGEF1-214ENST00000596957 LRRC4BQ9NT99 713 aa19.34■□□□□ 0.69
ARHGEF1-214ENST00000596957 ITPK1Q13572 414 aa19.33■□□□□ 0.68
ARHGEF1-214ENST00000596957 GIGYF1O75420 1035 aaPredicted RBP19.32■□□□□ 0.68
ARHGEF1-214ENST00000596957 EXOSC9Q06265 439 aaKnown RBP19.32■□□□□ 0.68
ARHGEF1-214ENST00000596957 DUSP27Q5VZP5 1158 aa19.32■□□□□ 0.68
ARHGEF1-214ENST00000596957 LINC00116Q8NCU8 138 aa19.32■□□□□ 0.68
ARHGEF1-214ENST00000596957 AK7Q96M32 723 aa19.32■□□□□ 0.68
ARHGEF1-214ENST00000596957 PRAMEF22A3QJZ6 481 aa19.31■□□□□ 0.68
ARHGEF1-214ENST00000596957 EIF2S2P20042 333 aaKnown RBP19.31■□□□□ 0.68
ARHGEF1-214ENST00000596957 NBPF14Q5TI25 921 aa19.31■□□□□ 0.68
ARHGEF1-214ENST00000596957 C8orf58Q8NAV2 365 aa19.31■□□□□ 0.68
ARHGEF1-214ENST00000596957 KDM3BQ7LBC6 1761 aa19.31■□□□□ 0.68
ARHGEF1-214ENST00000596957 TWISTNBQ3B726 338 aaPredicted RBP19.3■□□□□ 0.68
ARHGEF1-214ENST00000596957 NECTIN2Q92692 538 aa19.3■□□□□ 0.68
ARHGEF1-214ENST00000596957 STK32BQ9NY57 414 aa19.3■□□□□ 0.68
ARHGEF1-214ENST00000596957 HOXB7P09629 217 aa19.29■□□□□ 0.68
ARHGEF1-214ENST00000596957 HDGFL1Q5TGJ6 251 aa19.29■□□□□ 0.68
ARHGEF1-214ENST00000596957 NPM2Q86SE8 214 aaKnown RBP19.29■□□□□ 0.68
ARHGEF1-214ENST00000596957 CHMP4AQ9BY43 222 aa19.29■□□□□ 0.68
ARHGEF1-214ENST00000596957 USP16Q9Y5T5 823 aa19.29■□□□□ 0.68
ARHGEF1-214ENST00000596957 CYP19A1P11511 503 aaPredicted RBP19.28■□□□□ 0.68
ARHGEF1-214ENST00000596957 CRKLP46109 303 aaKnown RBP19.28■□□□□ 0.68
ARHGEF1-214ENST00000596957 TSPYL6Q8N831 410 aa19.28■□□□□ 0.68
ARHGEF1-214ENST00000596957 CCDC87Q9NVE4 849 aa19.28■□□□□ 0.68
ARHGEF1-214ENST00000596957 ZNF330Q9Y3S2 320 aaPredicted RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms