RNA–Protein interactions for RNA: ENST00000596829.1

AC009955.3-201, humanhuman

BASIC

Gene AC009955.3, Length 448 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009955.3-201ENST00000596829 NKX1-1Q15270 411 aaPredicted RBP14.04□□□□□ -0.16
AC009955.3-201ENST00000596829 VPS72Q15906 364 aa14.04□□□□□ -0.16
AC009955.3-201ENST00000596829 TWISTNBQ3B726 338 aaPredicted RBP14.04□□□□□ -0.16
AC009955.3-201ENST00000596829 SPATA31A5Q5VU36 1347 aa14.04□□□□□ -0.16
AC009955.3-201ENST00000596829 SPATA31A7Q8IWB4 1347 aa14.04□□□□□ -0.16
AC009955.3-201ENST00000596829 KDM6AO15550 1401 aaPredicted RBP14.04□□□□□ -0.16
AC009955.3-201ENST00000596829 VAMP4O75379 141 aa14.03□□□□□ -0.16
AC009955.3-201ENST00000596829 BARGINQ6ZT62 677 aa14.03□□□□□ -0.16
AC009955.3-201ENST00000596829 USP35Q9P2H5 1018 aa14.03□□□□□ -0.16
AC009955.3-201ENST00000596829 MRC1P22897 1456 aa14.03□□□□□ -0.16
AC009955.3-201ENST00000596829 BCAR3O75815 825 aa14.02□□□□□ -0.17
AC009955.3-201ENST00000596829 BRPF1P55201 1214 aaPredicted RBP14.02□□□□□ -0.17
AC009955.3-201ENST00000596829 KIF16BQ96L93 1317 aa14.01□□□□□ -0.17
AC009955.3-201ENST00000596829 BTBD11A6QL63 1104 aa14.01□□□□□ -0.17
AC009955.3-201ENST00000596829 SEPT12Q8IYM1 358 aa14.01□□□□□ -0.17
AC009955.3-201ENST00000596829 TSPYL6Q8N831 410 aa14.01□□□□□ -0.17
AC009955.3-201ENST00000596829 C8orf58Q8NAV2 365 aa14.01□□□□□ -0.17
AC009955.3-201ENST00000596829 CHMP4AQ9BY43 222 aa14.01□□□□□ -0.17
AC009955.3-201ENST00000596829 SLC52A2Q9HAB3 445 aa14.01□□□□□ -0.17
AC009955.3-201ENST00000596829 SMC4Q9NTJ3 1288 aa14.01□□□□□ -0.17
AC009955.3-201ENST00000596829 TNS2Q63HR2 1409 aa14□□□□□ -0.17
AC009955.3-201ENST00000596829 ERVV-2B6SEH9 535 aa14□□□□□ -0.17
AC009955.3-201ENST00000596829 HOXB7P09629 217 aa14□□□□□ -0.17
AC009955.3-201ENST00000596829 SSH1Q8WYL5 1049 aa14□□□□□ -0.17
AC009955.3-201ENST00000596829 MIS18AQ9NYP9 233 aa14□□□□□ -0.17
AC009955.3-201ENST00000596829 EXOC5O00471 708 aa13.99□□□□□ -0.17
AC009955.3-201ENST00000596829 CANXP27824 592 aaKnown RBP13.99□□□□□ -0.17
AC009955.3-201ENST00000596829 PDE3AQ14432 1141 aa13.99□□□□□ -0.17
AC009955.3-201ENST00000596829 IPO8O15397 1037 aaKnown RBP13.98□□□□□ -0.17
AC009955.3-201ENST00000596829 PLIN1O60240 522 aa13.98□□□□□ -0.17
AC009955.3-201ENST00000596829 MS4A1P11836 297 aa13.98□□□□□ -0.17
AC009955.3-201ENST00000596829 EIF4A1P60842 406 aaKnown RBP13.98□□□□□ -0.17
AC009955.3-201ENST00000596829 IRX6P78412 446 aaPredicted RBP13.98□□□□□ -0.17
AC009955.3-201ENST00000596829 KRT27Q7Z3Y8 459 aa13.98□□□□□ -0.17
AC009955.3-201ENST00000596829 ELL2O00472 640 aaPredicted RBP13.97□□□□□ -0.17
AC009955.3-201ENST00000596829 CABP4P57796 275 aa13.97□□□□□ -0.17
AC009955.3-201ENST00000596829 ZKSCAN2Q63HK3 967 aa13.97□□□□□ -0.17
AC009955.3-201ENST00000596829 DDX54Q8TDD1 881 aaKnown RBP13.97□□□□□ -0.17
AC009955.3-201ENST00000596829 BCL2L13Q9BXK5 485 aa13.97□□□□□ -0.17
AC009955.3-201ENST00000596829 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.97□□□□□ -0.17
AC009955.3-201ENST00000596829 ONECUT3O60422 494 aaPredicted RBP13.96□□□□□ -0.17
AC009955.3-201ENST00000596829 DDB1Q16531 1140 aa13.96□□□□□ -0.17
AC009955.3-201ENST00000596829 KRT24Q2M2I5 525 aa13.96□□□□□ -0.17
AC009955.3-201ENST00000596829 MRPL50Q8N5N7 158 aaKnown RBP13.96□□□□□ -0.17
AC009955.3-201ENST00000596829 ARHGAP45Q92619 1136 aa13.96□□□□□ -0.17
AC009955.3-201ENST00000596829 FRAT1Q92837 279 aaPredicted RBP13.96□□□□□ -0.17
AC009955.3-201ENST00000596829 HEG1Q9ULI3 1381 aa13.96□□□□□ -0.18
AC009955.3-201ENST00000596829 FAM98CQ17RN3 349 aaKnown RBP13.95□□□□□ -0.18
AC009955.3-201ENST00000596829 ZNF790Q6PG37 636 aa13.95□□□□□ -0.18
AC009955.3-201ENST00000596829 NFATC2IPQ8NCF5 419 aa13.95□□□□□ -0.18
AC009955.3-201ENST00000596829 WNK3Q9BYP7 1800 aa13.94□□□□□ -0.18
AC009955.3-201ENST00000596829 KDM3BQ7LBC6 1761 aa13.94□□□□□ -0.18
AC009955.3-201ENST00000596829 SCN11AQ9UI33 1791 aa13.94□□□□□ -0.18
AC009955.3-201ENST00000596829 CCDC30Q5VVM6 783 aa13.94□□□□□ -0.18
AC009955.3-201ENST00000596829 ATF7IPQ6VMQ6 1270 aa13.94□□□□□ -0.18
AC009955.3-201ENST00000596829 SHANK3Q9BYB0 1731 aa13.94□□□□□ -0.18
AC009955.3-201ENST00000596829 PPP4R2Q9NY27 417 aa13.94□□□□□ -0.18
AC009955.3-201ENST00000596829 NOB1Q9ULX3 412 aaKnown RBP13.94□□□□□ -0.18
AC009955.3-201ENST00000596829 EP400Q96L91 3159 aa13.94□□□□□ -0.18
AC009955.3-201ENST00000596829 GLI3P10071 1580 aa13.93□□□□□ -0.18
AC009955.3-201ENST00000596829 C20orf194Q5TEA3 1177 aa13.93□□□□□ -0.18
AC009955.3-201ENST00000596829 TTC5Q8N0Z6 440 aa13.93□□□□□ -0.18
AC009955.3-201ENST00000596829 STK31Q9BXU1 1019 aa13.93□□□□□ -0.18
AC009955.3-201ENST00000596829 SIPA1L3O60292 1781 aaPredicted RBP13.93□□□□□ -0.18
AC009955.3-201ENST00000596829 KCNQ3O43525 872 aa13.92□□□□□ -0.18
AC009955.3-201ENST00000596829 GIGYF1O75420 1035 aaPredicted RBP13.92□□□□□ -0.18
AC009955.3-201ENST00000596829 BAG6P46379 1132 aa13.92□□□□□ -0.18
AC009955.3-201ENST00000596829 AAMPQ13685 434 aa13.92□□□□□ -0.18
AC009955.3-201ENST00000596829 HDGFL1Q5TGJ6 251 aa13.92□□□□□ -0.18
AC009955.3-201ENST00000596829 FTSJ3Q8IY81 847 aaKnown RBP13.92□□□□□ -0.18
AC009955.3-201ENST00000596829 DZIP1LQ8IYY4 767 aaKnown RBP13.92□□□□□ -0.18
AC009955.3-201ENST00000596829 CRBNQ96SW2 442 aa13.92□□□□□ -0.18
AC009955.3-201ENST00000596829 API5Q9BZZ5 524 aaKnown RBP13.92□□□□□ -0.18
AC009955.3-201ENST00000596829 TMOD3Q9NYL9 352 aa13.92□□□□□ -0.18
AC009955.3-201ENST00000596829 PTPRCP08575 1304 aa13.91□□□□□ -0.18
AC009955.3-201ENST00000596829 TRIM27P14373 513 aa13.91□□□□□ -0.18
AC009955.3-201ENST00000596829 EXOC6Q8TAG9 804 aa13.91□□□□□ -0.18
AC009955.3-201ENST00000596829 FMNL2Q96PY5 1086 aa13.91□□□□□ -0.18
AC009955.3-201ENST00000596829 SRCAPQ6ZRS2 3230 aa13.9□□□□□ -0.18
AC009955.3-201ENST00000596829 SLC39A6Q13433 755 aa13.9□□□□□ -0.18
AC009955.3-201ENST00000596829 SLC4A2P04920 1241 aa13.89□□□□□ -0.19
AC009955.3-201ENST00000596829 DEFB132Q7Z7B7 95 aa13.89□□□□□ -0.19
AC009955.3-201ENST00000596829 MARCH10Q8NA82 808 aaPredicted RBP13.89□□□□□ -0.19
AC009955.3-201ENST00000596829 TCERG1O14776 1098 aaKnown RBP13.88□□□□□ -0.19
AC009955.3-201ENST00000596829 SNRPA1P09661 255 aaKnown RBP13.88□□□□□ -0.19
AC009955.3-201ENST00000596829 RLBP1P12271 317 aa13.88□□□□□ -0.19
AC009955.3-201ENST00000596829 MVPQ14764 893 aaKnown RBP13.88□□□□□ -0.19
AC009955.3-201ENST00000596829 PANK1Q8TE04 598 aa13.88□□□□□ -0.19
AC009955.3-201ENST00000596829 ZNF496Q96IT1 587 aaPredicted RBP13.88□□□□□ -0.19
AC009955.3-201ENST00000596829 BCL9O00512 1426 aa13.88□□□□□ -0.19
AC009955.3-201ENST00000596829 THSD7AQ9UPZ6 1657 aa13.88□□□□□ -0.19
AC009955.3-201ENST00000596829 ABCC4O15439 1325 aa13.88□□□□□ -0.19
AC009955.3-201ENST00000596829 PIGBQ92521 554 aa13.87□□□□□ -0.19
AC009955.3-201ENST00000596829 DBF4Q9UBU7 674 aaPredicted RBP13.87□□□□□ -0.19
AC009955.3-201ENST00000596829 TOGARAM1Q9Y4F4 1720 aa13.87□□□□□ -0.19
AC009955.3-201ENST00000596829 PAPPAQ13219 1627 aa13.86□□□□□ -0.19
AC009955.3-201ENST00000596829 EIF2S2P20042 333 aaKnown RBP13.86□□□□□ -0.19
AC009955.3-201ENST00000596829 CLUAP1Q96AJ1 413 aa13.86□□□□□ -0.19
AC009955.3-201ENST00000596829 CHMP4BQ9H444 224 aaKnown RBP13.86□□□□□ -0.19
AC009955.3-201ENST00000596829 DDX19BQ9UMR2 479 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms