RNA–Protein interactions for RNA: ENST00000595047.5

GTF2F1-205, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 5

Gene GTF2F1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-205ENST00000595047 CFAP44Q96MT7 982 aa23.79■■□□□ 1.4
GTF2F1-205ENST00000595047 IFT57Q9NWB7 429 aa23.79■■□□□ 1.4
GTF2F1-205ENST00000595047 ADAMTS7Q9UKP4 1686 aa23.79■■□□□ 1.4
GTF2F1-205ENST00000595047 GNAI1P63096 354 aa23.78■■□□□ 1.4
GTF2F1-205ENST00000595047 TSPYL4Q9UJ04 414 aa23.78■■□□□ 1.4
GTF2F1-205ENST00000595047 MRC1P22897 1456 aa23.78■■□□□ 1.4
GTF2F1-205ENST00000595047 CHL1O00533 1208 aa23.78■■□□□ 1.4
GTF2F1-205ENST00000595047 BABAM1Q9NWV8 329 aa23.78■■□□□ 1.4
GTF2F1-205ENST00000595047 DLG5Q8TDM6 1919 aa23.77■■□□□ 1.4
GTF2F1-205ENST00000595047 ZNF853P0CG23 659 aa23.77■■□□□ 1.4
GTF2F1-205ENST00000595047 SLC39A6Q13433 755 aa23.77■■□□□ 1.4
GTF2F1-205ENST00000595047 ILDR2Q71H61 639 aa23.77■■□□□ 1.4
GTF2F1-205ENST00000595047 ASAP1Q9ULH1 1129 aa23.77■■□□□ 1.4
GTF2F1-205ENST00000595047 TTC5Q8N0Z6 440 aa23.76■■□□□ 1.39
GTF2F1-205ENST00000595047 ATG3Q9NT62 314 aa23.76■■□□□ 1.39
GTF2F1-205ENST00000595047 TOGARAM1Q9Y4F4 1720 aa23.76■■□□□ 1.39
GTF2F1-205ENST00000595047 DOT1LQ8TEK3 1739 aa23.75■■□□□ 1.39
GTF2F1-205ENST00000595047 ZNF790Q6PG37 636 aa23.75■■□□□ 1.39
GTF2F1-205ENST00000595047 SPINK5Q9NQ38 1064 aaPredicted RBP23.75■■□□□ 1.39
GTF2F1-205ENST00000595047 SCN11AQ9UI33 1791 aa23.75■■□□□ 1.39
GTF2F1-205ENST00000595047 E9PSI1 815 aa23.74■■□□□ 1.39
GTF2F1-205ENST00000595047 SMARCC1Q92922 1105 aaPredicted RBP23.74■■□□□ 1.39
GTF2F1-205ENST00000595047 MBIPQ9NS73 344 aa23.74■■□□□ 1.39
GTF2F1-205ENST00000595047 KCNQ3O43525 872 aa23.73■■□□□ 1.39
GTF2F1-205ENST00000595047 APBA3O96018 575 aa23.73■■□□□ 1.39
GTF2F1-205ENST00000595047 SF3B2Q13435 895 aaKnown RBP23.73■■□□□ 1.39
GTF2F1-205ENST00000595047 CDCA7LQ96GN5 454 aa23.73■■□□□ 1.39
GTF2F1-205ENST00000595047 MYH16Q9H6N6 1097 aa23.73■■□□□ 1.39
GTF2F1-205ENST00000595047 SLFN5Q08AF3 891 aa23.72■■□□□ 1.39
GTF2F1-205ENST00000595047 TSR2Q969E8 191 aaKnown RBP23.72■■□□□ 1.39
GTF2F1-205ENST00000595047 NHSQ6T4R5 1651 aa23.7■■□□□ 1.38
GTF2F1-205ENST00000595047 PTCD1O75127 700 aaKnown RBP23.7■■□□□ 1.38
GTF2F1-205ENST00000595047 RBM42Q9BTD8 480 aaKnown RBP23.7■■□□□ 1.38
GTF2F1-205ENST00000595047 PALLDQ8WX93 1383 aa23.7■■□□□ 1.38
GTF2F1-205ENST00000595047 FMNL2Q96PY5 1086 aa23.69■■□□□ 1.38
GTF2F1-205ENST00000595047 EIF4A1P60842 406 aaKnown RBP23.68■■□□□ 1.38
GTF2F1-205ENST00000595047 CCDC125Q86Z20 511 aa23.68■■□□□ 1.38
GTF2F1-205ENST00000595047 FANCIQ9NVI1 1328 aa23.68■■□□□ 1.38
GTF2F1-205ENST00000595047 ZNF496Q96IT1 587 aaPredicted RBP23.67■■□□□ 1.38
GTF2F1-205ENST00000595047 PLSCR1O15162 318 aa23.65■■□□□ 1.38
GTF2F1-205ENST00000595047 LOC102724428A0A0B4J2F2 783 aa23.65■■□□□ 1.38
GTF2F1-205ENST00000595047 SIK1P57059 783 aa23.65■■□□□ 1.38
GTF2F1-205ENST00000595047 TRMT2AQ8IZ69 625 aaKnown RBP23.65■■□□□ 1.38
GTF2F1-205ENST00000595047 ITGB4P16144 1822 aa23.64■■□□□ 1.37
GTF2F1-205ENST00000595047 BAG6P46379 1132 aa23.64■■□□□ 1.37
GTF2F1-205ENST00000595047 DUSP27Q5VZP5 1158 aa23.64■■□□□ 1.37
GTF2F1-205ENST00000595047 UPF1Q92900 1129 aaKnown RBP eCLIP23.64■■□□□ 1.37
GTF2F1-205ENST00000595047 SBF2Q86WG5 1849 aa23.63■■□□□ 1.37
GTF2F1-205ENST00000595047 KRT24Q2M2I5 525 aa23.63■■□□□ 1.37
GTF2F1-205ENST00000595047 VSIG10Q8N0Z9 540 aa23.63■■□□□ 1.37
GTF2F1-205ENST00000595047 SIPA1L3O60292 1781 aaPredicted RBP23.63■■□□□ 1.37
GTF2F1-205ENST00000595047 HEG1Q9ULI3 1381 aa23.62■■□□□ 1.37
GTF2F1-205ENST00000595047 SNRPA1P09661 255 aaKnown RBP23.62■■□□□ 1.37
GTF2F1-205ENST00000595047 ATP6V1AP38606 617 aa23.62■■□□□ 1.37
GTF2F1-205ENST00000595047 EXOSC9Q06265 439 aaKnown RBP23.62■■□□□ 1.37
GTF2F1-205ENST00000595047 CCNL1Q9UK58 526 aaPredicted RBP23.62■■□□□ 1.37
GTF2F1-205ENST00000595047 KAT6BQ8WYB5 2073 aa23.62■■□□□ 1.37
GTF2F1-205ENST00000595047 ELL2O00472 640 aaPredicted RBP23.61■■□□□ 1.37
GTF2F1-205ENST00000595047 EN1Q05925 392 aaPredicted RBP23.61■■□□□ 1.37
GTF2F1-205ENST00000595047 C8orf58Q8NAV2 365 aa23.61■■□□□ 1.37
GTF2F1-205ENST00000595047 SLC4A9Q96Q91 983 aa23.61■■□□□ 1.37
GTF2F1-205ENST00000595047 BTAF1O14981 1849 aa23.6■■□□□ 1.37
GTF2F1-205ENST00000595047 VIRMAQ69YN4 1812 aaKnown RBP23.6■■□□□ 1.37
GTF2F1-205ENST00000595047 GIGYF1O75420 1035 aaPredicted RBP23.6■■□□□ 1.37
GTF2F1-205ENST00000595047 TXNRD1Q16881 649 aa23.6■■□□□ 1.37
GTF2F1-205ENST00000595047 KCPQ6ZWJ8 1503 aa23.6■■□□□ 1.37
GTF2F1-205ENST00000595047 KCNQ4P56696 695 aa23.59■■□□□ 1.37
GTF2F1-205ENST00000595047 SLC27A3Q5K4L6 730 aa23.59■■□□□ 1.37
GTF2F1-205ENST00000595047 DEFB132Q7Z7B7 95 aa23.59■■□□□ 1.37
GTF2F1-205ENST00000595047 PRAMEF22A3QJZ6 481 aa23.58■■□□□ 1.37
GTF2F1-205ENST00000595047 DNAJC10Q8IXB1 793 aa23.58■■□□□ 1.37
GTF2F1-205ENST00000595047 TSPYL6Q8N831 410 aa23.58■■□□□ 1.37
GTF2F1-205ENST00000595047 CAMKK2Q96RR4 588 aa23.58■■□□□ 1.37
GTF2F1-205ENST00000595047 TEX13AQ9BXU3 409 aaPredicted RBP23.58■■□□□ 1.37
GTF2F1-205ENST00000595047 PAPPAQ13219 1627 aa23.57■■□□□ 1.36
GTF2F1-205ENST00000595047 EZH2Q15910 746 aaKnown RBP23.57■■□□□ 1.36
GTF2F1-205ENST00000595047 TWISTNBQ3B726 338 aaPredicted RBP23.57■■□□□ 1.36
GTF2F1-205ENST00000595047 PROM2Q8N271 834 aa23.57■■□□□ 1.36
GTF2F1-205ENST00000595047 HOXB7P09629 217 aa23.56■■□□□ 1.36
GTF2F1-205ENST00000595047 ITPK1Q13572 414 aa23.56■■□□□ 1.36
GTF2F1-205ENST00000595047 USP16Q9Y5T5 823 aa23.56■■□□□ 1.36
GTF2F1-205ENST00000595047 KDM3BQ7LBC6 1761 aa23.56■■□□□ 1.36
GTF2F1-205ENST00000595047 LRRC4BQ9NT99 713 aa23.55■■□□□ 1.36
GTF2F1-205ENST00000595047 EP400Q96L91 3159 aa23.55■■□□□ 1.36
GTF2F1-205ENST00000595047 SOS1Q07889 1333 aaPredicted RBP23.55■■□□□ 1.36
GTF2F1-205ENST00000595047 STARD3NLO95772 234 aa23.54■■□□□ 1.36
GTF2F1-205ENST00000595047 EIF2S2P20042 333 aaKnown RBP23.54■■□□□ 1.36
GTF2F1-205ENST00000595047 HMGB2P26583 209 aaKnown RBP23.54■■□□□ 1.36
GTF2F1-205ENST00000595047 TNS1Q9HBL0 1735 aaKnown RBP23.54■■□□□ 1.36
GTF2F1-205ENST00000595047 VAMP4O75379 141 aa23.53■■□□□ 1.36
GTF2F1-205ENST00000595047 LINC00116Q8NCU8 138 aa23.52■■□□□ 1.36
GTF2F1-205ENST00000595047 NECTIN2Q92692 538 aa23.52■■□□□ 1.36
GTF2F1-205ENST00000595047 CHMP4AQ9BY43 222 aa23.52■■□□□ 1.36
GTF2F1-205ENST00000595047 CYP19A1P11511 503 aaPredicted RBP23.52■■□□□ 1.36
GTF2F1-205ENST00000595047 HDGFL1Q5TGJ6 251 aa23.52■■□□□ 1.36
GTF2F1-205ENST00000595047 UBR2Q8IWV8 1755 aa23.5■■□□□ 1.35
GTF2F1-205ENST00000595047 CT47B1P0C2W7 299 aaPredicted RBP23.5■■□□□ 1.35
GTF2F1-205ENST00000595047 A1BGP04217 495 aa23.49■■□□□ 1.35
GTF2F1-205ENST00000595047 CRKLP46109 303 aaKnown RBP23.49■■□□□ 1.35
GTF2F1-205ENST00000595047 CCDC30Q5VVM6 783 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms