RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 TMPOP42166 694 aaKnown RBP12.74□□□□□ -0.37
DDX39A-220ENST00000593008 NFE2L2Q16236 605 aa12.74□□□□□ -0.37
DDX39A-220ENST00000593008 C1orf141Q5JVX7 400 aa12.74□□□□□ -0.37
DDX39A-220ENST00000593008 MCM10Q7L590 875 aa12.74□□□□□ -0.37
DDX39A-220ENST00000593008 MAP3K5Q99683 1374 aa12.73□□□□□ -0.37
DDX39A-220ENST00000593008 HNRNPUQ00839 825 aaKnown RBP eCLIP12.73□□□□□ -0.37
DDX39A-220ENST00000593008 DCAF5Q96JK2 942 aa12.73□□□□□ -0.37
DDX39A-220ENST00000593008 ASAP1Q9ULH1 1129 aa12.73□□□□□ -0.37
DDX39A-220ENST00000593008 TRIM35Q9UPQ4 493 aa12.73□□□□□ -0.37
DDX39A-220ENST00000593008 HSP90AB1P08238 724 aaKnown RBP12.72□□□□□ -0.37
DDX39A-220ENST00000593008 RIPK4P57078 832 aa12.72□□□□□ -0.37
DDX39A-220ENST00000593008 AKT1S1Q96B36 256 aa12.72□□□□□ -0.37
DDX39A-220ENST00000593008 LGR6Q9HBX8 967 aa12.72□□□□□ -0.37
DDX39A-220ENST00000593008 SPON1Q9HCB6 807 aa12.72□□□□□ -0.37
DDX39A-220ENST00000593008 TFCP2L1Q9NZI6 479 aa12.72□□□□□ -0.37
DDX39A-220ENST00000593008 ATF5Q9Y2D1 282 aaPredicted RBP12.72□□□□□ -0.37
DDX39A-220ENST00000593008 ADAMTS7Q9UKP4 1686 aa12.72□□□□□ -0.37
DDX39A-220ENST00000593008 PAPPAQ13219 1627 aa12.72□□□□□ -0.37
DDX39A-220ENST00000593008 PLEKHG2Q9H7P9 1386 aa12.71□□□□□ -0.37
DDX39A-220ENST00000593008 LRP5O75197 1615 aa12.71□□□□□ -0.37
DDX39A-220ENST00000593008 CABP4P57796 275 aa12.71□□□□□ -0.37
DDX39A-220ENST00000593008 GAS2L2Q8NHY3 880 aa12.71□□□□□ -0.37
DDX39A-220ENST00000593008 SMARCC1Q92922 1105 aaPredicted RBP12.71□□□□□ -0.37
DDX39A-220ENST00000593008 ATG3Q9NT62 314 aa12.71□□□□□ -0.37
DDX39A-220ENST00000593008 VIRMAQ69YN4 1812 aaKnown RBP12.7□□□□□ -0.38
DDX39A-220ENST00000593008 ERVV-2B6SEH9 535 aa12.7□□□□□ -0.38
DDX39A-220ENST00000593008 IL17REQ8NFR9 667 aa12.7□□□□□ -0.38
DDX39A-220ENST00000593008 LOC102724428A0A0B4J2F2 783 aa12.69□□□□□ -0.38
DDX39A-220ENST00000593008 SIK1P57059 783 aa12.69□□□□□ -0.38
DDX39A-220ENST00000593008 AKAP4Q5JQC9 854 aa12.69□□□□□ -0.38
DDX39A-220ENST00000593008 NFATC2IPQ8NCF5 419 aa12.69□□□□□ -0.38
DDX39A-220ENST00000593008 SPINK5Q9NQ38 1064 aaPredicted RBP12.69□□□□□ -0.38
DDX39A-220ENST00000593008 PPP1R1BQ9UD71 204 aaPredicted RBP12.69□□□□□ -0.38
DDX39A-220ENST00000593008 MRC1P22897 1456 aa12.69□□□□□ -0.38
DDX39A-220ENST00000593008 ITGB4P16144 1822 aa12.69□□□□□ -0.38
DDX39A-220ENST00000593008 SCN11AQ9UI33 1791 aa12.69□□□□□ -0.38
DDX39A-220ENST00000593008 LY75O60449 1722 aa12.68□□□□□ -0.38
DDX39A-220ENST00000593008 PNPLA7Q6ZV29 1317 aa12.68□□□□□ -0.38
DDX39A-220ENST00000593008 GNAT3A8MTJ3 354 aa12.68□□□□□ -0.38
DDX39A-220ENST00000593008 RNMTO43148 476 aaKnown RBP12.68□□□□□ -0.38
DDX39A-220ENST00000593008 MSH5O43196 834 aa12.68□□□□□ -0.38
DDX39A-220ENST00000593008 SMIM5Q71RC9 77 aa12.68□□□□□ -0.38
DDX39A-220ENST00000593008 RBM42Q9BTD8 480 aaKnown RBP12.68□□□□□ -0.38
DDX39A-220ENST00000593008 CASZ1Q86V15 1759 aa12.68□□□□□ -0.38
DDX39A-220ENST00000593008 ZNF521Q96K83 1311 aa12.67□□□□□ -0.38
DDX39A-220ENST00000593008 NEFMP07197 916 aa12.67□□□□□ -0.38
DDX39A-220ENST00000593008 ATP6V1AP38606 617 aa12.67□□□□□ -0.38
DDX39A-220ENST00000593008 ITPK1Q13572 414 aa12.67□□□□□ -0.38
DDX39A-220ENST00000593008 WWC1Q8IX03 1113 aa12.67□□□□□ -0.38
DDX39A-220ENST00000593008 LINC00116Q8NCU8 138 aa12.67□□□□□ -0.38
DDX39A-220ENST00000593008 PNNQ9H307 717 aaKnown RBP12.67□□□□□ -0.38
DDX39A-220ENST00000593008 MIS18AQ9NYP9 233 aa12.67□□□□□ -0.38
DDX39A-220ENST00000593008 CEMIPQ8WUJ3 1361 aa12.67□□□□□ -0.38
DDX39A-220ENST00000593008 SIPA1L3O60292 1781 aaPredicted RBP12.66□□□□□ -0.38
DDX39A-220ENST00000593008 PTCD1O75127 700 aaKnown RBP12.66□□□□□ -0.38
DDX39A-220ENST00000593008 PTGER2P43116 358 aa12.66□□□□□ -0.38
DDX39A-220ENST00000593008 AMIGO3Q86WK7 504 aa12.66□□□□□ -0.38
DDX39A-220ENST00000593008 CDCA7LQ96GN5 454 aa12.66□□□□□ -0.38
DDX39A-220ENST00000593008 AK7Q96M32 723 aa12.66□□□□□ -0.38
DDX39A-220ENST00000593008 MTFR1LQ9H019 292 aa12.66□□□□□ -0.38
DDX39A-220ENST00000593008 KCNQ3O43525 872 aa12.65□□□□□ -0.38
DDX39A-220ENST00000593008 PHF14O94880 888 aa12.65□□□□□ -0.38
DDX39A-220ENST00000593008 COL23A1Q86Y22 540 aaPredicted RBP12.65□□□□□ -0.38
DDX39A-220ENST00000593008 SLC4A9Q96Q91 983 aa12.65□□□□□ -0.38
DDX39A-220ENST00000593008 SLC52A2Q9HAB3 445 aa12.64□□□□□ -0.39
DDX39A-220ENST00000593008 SLC39A6Q13433 755 aa12.63□□□□□ -0.39
DDX39A-220ENST00000593008 MSL1Q68DK7 614 aa12.63□□□□□ -0.39
DDX39A-220ENST00000593008 RTF1Q92541 710 aaKnown RBP12.63□□□□□ -0.39
DDX39A-220ENST00000593008 TSR2Q969E8 191 aaKnown RBP12.63□□□□□ -0.39
DDX39A-220ENST00000593008 LAS1LQ9Y4W2 734 aaKnown RBP12.63□□□□□ -0.39
DDX39A-220ENST00000593008 C5P01031 1676 aa12.63□□□□□ -0.39
DDX39A-220ENST00000593008 KDM3BQ7LBC6 1761 aa12.63□□□□□ -0.39
DDX39A-220ENST00000593008 ZBED9Q6R2W3 1325 aa12.62□□□□□ -0.39
DDX39A-220ENST00000593008 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.62□□□□□ -0.39
DDX39A-220ENST00000593008 GNPATO15228 680 aa12.62□□□□□ -0.39
DDX39A-220ENST00000593008 CCDC27Q2M243 656 aa12.62□□□□□ -0.39
DDX39A-220ENST00000593008 KRT24Q2M2I5 525 aa12.62□□□□□ -0.39
DDX39A-220ENST00000593008 SGIP1Q9BQI5 828 aa12.62□□□□□ -0.39
DDX39A-220ENST00000593008 C4BP0C0L5 1744 aa12.62□□□□□ -0.39
DDX39A-220ENST00000593008 TUBGCP6Q96RT7 1819 aa12.61□□□□□ -0.39
DDX39A-220ENST00000593008 KCPQ6ZWJ8 1503 aa12.61□□□□□ -0.39
DDX39A-220ENST00000593008 HTATSF1O43719 755 aaKnown RBP12.6□□□□□ -0.39
DDX39A-220ENST00000593008 HMGB2P26583 209 aaKnown RBP12.6□□□□□ -0.39
DDX39A-220ENST00000593008 LMOD3Q0VAK6 560 aa12.6□□□□□ -0.39
DDX39A-220ENST00000593008 KLHL34Q8N239 644 aa12.6□□□□□ -0.39
DDX39A-220ENST00000593008 SLC16A10Q8TF71 515 aa12.6□□□□□ -0.39
DDX39A-220ENST00000593008 ARXQ96QS3 562 aa12.6□□□□□ -0.39
DDX39A-220ENST00000593008 FHDC1Q9C0D6 1143 aaPredicted RBP12.6□□□□□ -0.39
DDX39A-220ENST00000593008 FANCIQ9NVI1 1328 aa12.6□□□□□ -0.39
DDX39A-220ENST00000593008 ZNF853P0CG23 659 aa12.59□□□□□ -0.39
DDX39A-220ENST00000593008 POLD1P28340 1107 aa12.59□□□□□ -0.39
DDX39A-220ENST00000593008 TEFQ10587 303 aa12.59□□□□□ -0.39
DDX39A-220ENST00000593008 FLAD1Q8NFF5 587 aa12.59□□□□□ -0.39
DDX39A-220ENST00000593008 MBIPQ9NS73 344 aa12.59□□□□□ -0.39
DDX39A-220ENST00000593008 TAF1LQ8IZX4 1826 aa12.59□□□□□ -0.39
DDX39A-220ENST00000593008 PRAMEF22A3QJZ6 481 aa12.58□□□□□ -0.4
DDX39A-220ENST00000593008 DNAJC10Q8IXB1 793 aa12.58□□□□□ -0.4
DDX39A-220ENST00000593008 UBR2Q8IWV8 1755 aa12.58□□□□□ -0.4
DDX39A-220ENST00000593008 QSER1Q2KHR3 1735 aa12.57□□□□□ -0.4
DDX39A-220ENST00000593008 BTBD11A6QL63 1104 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms