RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 YTHDC1Q96MU7 727 aaKnown RBP13.9□□□□□ -0.19
SMAD4-214ENST00000592186 THUMPD2Q9BTF0 503 aaKnown RBP13.9□□□□□ -0.19
SMAD4-214ENST00000592186 MYH16Q9H6N6 1097 aa13.9□□□□□ -0.19
SMAD4-214ENST00000592186 BTBD11A6QL63 1104 aa13.89□□□□□ -0.19
SMAD4-214ENST00000592186 E9PSI1 815 aa13.89□□□□□ -0.19
SMAD4-214ENST00000592186 CHL1O00533 1208 aa13.89□□□□□ -0.19
SMAD4-214ENST00000592186 SYTL4Q96C24 671 aaPredicted RBP13.89□□□□□ -0.19
SMAD4-214ENST00000592186 BCL11BQ9C0K0 894 aaPredicted RBP13.89□□□□□ -0.19
SMAD4-214ENST00000592186 ZNF853P0CG23 659 aa13.88□□□□□ -0.19
SMAD4-214ENST00000592186 FAM182BQ5T319 152 aa13.88□□□□□ -0.19
SMAD4-214ENST00000592186 LAS1LQ9Y4W2 734 aaKnown RBP13.88□□□□□ -0.19
SMAD4-214ENST00000592186 SHANK3Q9BYB0 1731 aa13.87□□□□□ -0.19
SMAD4-214ENST00000592186 HMGB2P26583 209 aaKnown RBP13.87□□□□□ -0.19
SMAD4-214ENST00000592186 PIGBQ92521 554 aa13.87□□□□□ -0.19
SMAD4-214ENST00000592186 SMARCC1Q92922 1105 aaPredicted RBP13.87□□□□□ -0.19
SMAD4-214ENST00000592186 ACSBG1Q96GR2 724 aa13.87□□□□□ -0.19
SMAD4-214ENST00000592186 TSPYL4Q9UJ04 414 aa13.87□□□□□ -0.19
SMAD4-214ENST00000592186 ADAMTS7Q9UKP4 1686 aa13.86□□□□□ -0.19
SMAD4-214ENST00000592186 SLFN5Q08AF3 891 aa13.86□□□□□ -0.19
SMAD4-214ENST00000592186 TTC5Q8N0Z6 440 aa13.86□□□□□ -0.19
SMAD4-214ENST00000592186 KCNQ2O43526 872 aa13.85□□□□□ -0.19
SMAD4-214ENST00000592186 NPM3O75607 178 aaKnown RBP13.85□□□□□ -0.19
SMAD4-214ENST00000592186 ZNF790Q6PG37 636 aa13.85□□□□□ -0.19
SMAD4-214ENST00000592186 CCDC125Q86Z20 511 aa13.85□□□□□ -0.19
SMAD4-214ENST00000592186 CHMP4AQ9BY43 222 aa13.85□□□□□ -0.19
SMAD4-214ENST00000592186 MRC1P22897 1456 aa13.84□□□□□ -0.19
SMAD4-214ENST00000592186 TRIM37O94972 964 aa13.84□□□□□ -0.19
SMAD4-214ENST00000592186 TRMT2AQ8IZ69 625 aaKnown RBP13.84□□□□□ -0.19
SMAD4-214ENST00000592186 MIS18AQ9NYP9 233 aa13.84□□□□□ -0.19
SMAD4-214ENST00000592186 DLG5Q8TDM6 1919 aa13.84□□□□□ -0.19
SMAD4-214ENST00000592186 SCN11AQ9UI33 1791 aa13.83□□□□□ -0.2
SMAD4-214ENST00000592186 FMNL2Q96PY5 1086 aa13.83□□□□□ -0.2
SMAD4-214ENST00000592186 MBIPQ9NS73 344 aa13.83□□□□□ -0.2
SMAD4-214ENST00000592186 ATG3Q9NT62 314 aa13.83□□□□□ -0.2
SMAD4-214ENST00000592186 SOS1Q07889 1333 aaPredicted RBP13.82□□□□□ -0.2
SMAD4-214ENST00000592186 BRWD3Q6RI45 1802 aa13.82□□□□□ -0.2
SMAD4-214ENST00000592186 CDCA7LQ96GN5 454 aa13.82□□□□□ -0.2
SMAD4-214ENST00000592186 TEX13AQ9BXU3 409 aaPredicted RBP13.82□□□□□ -0.2
SMAD4-214ENST00000592186 ASAP1Q9ULH1 1129 aa13.82□□□□□ -0.2
SMAD4-214ENST00000592186 EIF4A1P60842 406 aaKnown RBP13.81□□□□□ -0.2
SMAD4-214ENST00000592186 SLC39A6Q13433 755 aa13.81□□□□□ -0.2
SMAD4-214ENST00000592186 SF3B2Q13435 895 aaKnown RBP13.81□□□□□ -0.2
SMAD4-214ENST00000592186 VSIG10Q8N0Z9 540 aa13.81□□□□□ -0.2
SMAD4-214ENST00000592186 SPINK5Q9NQ38 1064 aaPredicted RBP13.81□□□□□ -0.2
SMAD4-214ENST00000592186 FANCIQ9NVI1 1328 aa13.81□□□□□ -0.2
SMAD4-214ENST00000592186 PLSCR1O15162 318 aa13.8□□□□□ -0.2
SMAD4-214ENST00000592186 HOXB7P09629 217 aa13.8□□□□□ -0.2
SMAD4-214ENST00000592186 CT47B1P0C2W7 299 aaPredicted RBP13.8□□□□□ -0.2
SMAD4-214ENST00000592186 DUSP27Q5VZP5 1158 aa13.8□□□□□ -0.2
SMAD4-214ENST00000592186 TSR2Q969E8 191 aaKnown RBP13.8□□□□□ -0.2
SMAD4-214ENST00000592186 APBA3O96018 575 aa13.79□□□□□ -0.2
SMAD4-214ENST00000592186 SNRPA1P09661 255 aaKnown RBP13.79□□□□□ -0.2
SMAD4-214ENST00000592186 ZNF428Q96B54 188 aa13.79□□□□□ -0.2
SMAD4-214ENST00000592186 ZNF496Q96IT1 587 aaPredicted RBP13.79□□□□□ -0.2
SMAD4-214ENST00000592186 DCAF8L1A6NGE4 600 aa13.78□□□□□ -0.2
SMAD4-214ENST00000592186 KCNQ3O43525 872 aa13.78□□□□□ -0.2
SMAD4-214ENST00000592186 PTCD1O75127 700 aaKnown RBP13.78□□□□□ -0.2
SMAD4-214ENST00000592186 PTF1AQ7RTS3 328 aa13.78□□□□□ -0.2
SMAD4-214ENST00000592186 RBM42Q9BTD8 480 aaKnown RBP13.78□□□□□ -0.2
SMAD4-214ENST00000592186 NHSQ6T4R5 1651 aa13.77□□□□□ -0.21
SMAD4-214ENST00000592186 LOC102724428A0A0B4J2F2 783 aa13.77□□□□□ -0.21
SMAD4-214ENST00000592186 GIGYF1O75420 1035 aaPredicted RBP13.77□□□□□ -0.21
SMAD4-214ENST00000592186 SIK1P57059 783 aa13.77□□□□□ -0.21
SMAD4-214ENST00000592186 EXOSC9Q06265 439 aaKnown RBP13.77□□□□□ -0.21
SMAD4-214ENST00000592186 SLC27A3Q5K4L6 730 aa13.77□□□□□ -0.21
SMAD4-214ENST00000592186 DOT1LQ8TEK3 1739 aa13.77□□□□□ -0.21
SMAD4-214ENST00000592186 TOGARAM1Q9Y4F4 1720 aa13.77□□□□□ -0.21
SMAD4-214ENST00000592186 PALLDQ8WX93 1383 aa13.77□□□□□ -0.21
SMAD4-214ENST00000592186 HEG1Q9ULI3 1381 aa13.77□□□□□ -0.21
SMAD4-214ENST00000592186 STARD3NLO95772 234 aa13.76□□□□□ -0.21
SMAD4-214ENST00000592186 BAG6P46379 1132 aa13.76□□□□□ -0.21
SMAD4-214ENST00000592186 TWISTNBQ3B726 338 aaPredicted RBP13.76□□□□□ -0.21
SMAD4-214ENST00000592186 C8orf58Q8NAV2 365 aa13.76□□□□□ -0.21
SMAD4-214ENST00000592186 SIPA1L3O60292 1781 aaPredicted RBP13.76□□□□□ -0.21
SMAD4-214ENST00000592186 ATP6V1AP38606 617 aa13.75□□□□□ -0.21
SMAD4-214ENST00000592186 ITGB4P16144 1822 aa13.75□□□□□ -0.21
SMAD4-214ENST00000592186 VAMP4O75379 141 aa13.74□□□□□ -0.21
SMAD4-214ENST00000592186 EP400Q96L91 3159 aa13.74□□□□□ -0.21
SMAD4-214ENST00000592186 SBF2Q86WG5 1849 aa13.73□□□□□ -0.21
SMAD4-214ENST00000592186 ELL2O00472 640 aaPredicted RBP13.73□□□□□ -0.21
SMAD4-214ENST00000592186 CCDC30Q5VVM6 783 aa13.73□□□□□ -0.21
SMAD4-214ENST00000592186 CCNL1Q9UK58 526 aaPredicted RBP13.73□□□□□ -0.21
SMAD4-214ENST00000592186 VIRMAQ69YN4 1812 aaKnown RBP13.73□□□□□ -0.21
SMAD4-214ENST00000592186 KAT6BQ8WYB5 2073 aa13.72□□□□□ -0.21
SMAD4-214ENST00000592186 TXNRD1Q16881 649 aa13.72□□□□□ -0.21
SMAD4-214ENST00000592186 TSPYL6Q8N831 410 aa13.72□□□□□ -0.21
SMAD4-214ENST00000592186 KCPQ6ZWJ8 1503 aa13.72□□□□□ -0.21
SMAD4-214ENST00000592186 KDM3BQ7LBC6 1761 aa13.71□□□□□ -0.21
SMAD4-214ENST00000592186 ERBB4Q15303 1308 aa13.71□□□□□ -0.21
SMAD4-214ENST00000592186 KRT24Q2M2I5 525 aa13.71□□□□□ -0.21
SMAD4-214ENST00000592186 HDGFL1Q5TGJ6 251 aa13.71□□□□□ -0.21
SMAD4-214ENST00000592186 UPF1Q92900 1129 aaKnown RBP eCLIP13.71□□□□□ -0.21
SMAD4-214ENST00000592186 SLC4A9Q96Q91 983 aa13.71□□□□□ -0.21
SMAD4-214ENST00000592186 STK31Q9BXU1 1019 aa13.71□□□□□ -0.21
SMAD4-214ENST00000592186 DBF4Q9UBU7 674 aaPredicted RBP13.71□□□□□ -0.21
SMAD4-214ENST00000592186 USP16Q9Y5T5 823 aa13.71□□□□□ -0.21
SMAD4-214ENST00000592186 PAPPAQ13219 1627 aa13.7□□□□□ -0.22
SMAD4-214ENST00000592186 CENPBP07199 599 aaPredicted RBP13.7□□□□□ -0.22
SMAD4-214ENST00000592186 CYP19A1P11511 503 aaPredicted RBP13.7□□□□□ -0.22
SMAD4-214ENST00000592186 EIF2S2P20042 333 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms