RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 SSH1Q8WYL5 1049 aa16.59■□□□□ 0.25
PTBP1-216ENST00000590887 NGLY1Q96IV0 654 aa16.59■□□□□ 0.25
PTBP1-216ENST00000590887 STK31Q9BXU1 1019 aa16.59■□□□□ 0.25
PTBP1-216ENST00000590887 SCN11AQ9UI33 1791 aa16.59■□□□□ 0.25
PTBP1-216ENST00000590887 ERVV-2B6SEH9 535 aa16.58■□□□□ 0.24
PTBP1-216ENST00000590887 C8orf58Q8NAV2 365 aa16.58■□□□□ 0.24
PTBP1-216ENST00000590887 USP35Q9P2H5 1018 aa16.58■□□□□ 0.24
PTBP1-216ENST00000590887 CACNA1FO60840 1977 aa16.57■□□□□ 0.24
PTBP1-216ENST00000590887 ADAMTS7Q9UKP4 1686 aa16.57■□□□□ 0.24
PTBP1-216ENST00000590887 ELL2O00472 640 aaPredicted RBP16.57■□□□□ 0.24
PTBP1-216ENST00000590887 CABP4P57796 275 aa16.57■□□□□ 0.24
PTBP1-216ENST00000590887 NKX1-1Q15270 411 aaPredicted RBP16.57■□□□□ 0.24
PTBP1-216ENST00000590887 UNC5CLQ8IV45 518 aa16.57■□□□□ 0.24
PTBP1-216ENST00000590887 DZIP1LQ8IYY4 767 aaKnown RBP16.57■□□□□ 0.24
PTBP1-216ENST00000590887 API5Q9BZZ5 524 aaKnown RBP16.57■□□□□ 0.24
PTBP1-216ENST00000590887 SLC52A2Q9HAB3 445 aa16.57■□□□□ 0.24
PTBP1-216ENST00000590887 ATF7IPQ6VMQ6 1270 aa16.56■□□□□ 0.24
PTBP1-216ENST00000590887 TTC5Q8N0Z6 440 aa16.56■□□□□ 0.24
PTBP1-216ENST00000590887 TSPYL6Q8N831 410 aa16.56■□□□□ 0.24
PTBP1-216ENST00000590887 CCDC136Q96JN2 1154 aa16.56■□□□□ 0.24
PTBP1-216ENST00000590887 MIS18AQ9NYP9 233 aa16.56■□□□□ 0.24
PTBP1-216ENST00000590887 CCDC9Q9Y3X0 531 aaKnown RBP16.56■□□□□ 0.24
PTBP1-216ENST00000590887 SLIT2O94813 1529 aa16.55■□□□□ 0.24
PTBP1-216ENST00000590887 CYP27B1O15528 508 aa16.55■□□□□ 0.24
PTBP1-216ENST00000590887 MRPL50Q8N5N7 158 aaKnown RBP16.55■□□□□ 0.24
PTBP1-216ENST00000590887 C8orf37Q96NL8 207 aa16.55■□□□□ 0.24
PTBP1-216ENST00000590887 CRBNQ96SW2 442 aa16.55■□□□□ 0.24
PTBP1-216ENST00000590887 BCL2L13Q9BXK5 485 aa16.55■□□□□ 0.24
PTBP1-216ENST00000590887 NOB1Q9ULX3 412 aaKnown RBP16.55■□□□□ 0.24
PTBP1-216ENST00000590887 NRAPQ86VF7 1730 aa16.55■□□□□ 0.24
PTBP1-216ENST00000590887 PTPRCP08575 1304 aa16.54■□□□□ 0.24
PTBP1-216ENST00000590887 SPATA31A1Q5TZJ5 1347 aa16.54■□□□□ 0.24
PTBP1-216ENST00000590887 BARGINQ6ZT62 677 aa16.54■□□□□ 0.24
PTBP1-216ENST00000590887 EXOC6Q8TAG9 804 aa16.54■□□□□ 0.24
PTBP1-216ENST00000590887 DDX54Q8TDD1 881 aaKnown RBP16.54■□□□□ 0.24
PTBP1-216ENST00000590887 KDM3BQ7LBC6 1761 aa16.54■□□□□ 0.24
PTBP1-216ENST00000590887 SPATA31A5Q5VU36 1347 aa16.53■□□□□ 0.24
PTBP1-216ENST00000590887 SPATA31A7Q8IWB4 1347 aa16.53■□□□□ 0.24
PTBP1-216ENST00000590887 EIF4A1P60842 406 aaKnown RBP16.53■□□□□ 0.24
PTBP1-216ENST00000590887 FNBP4Q8N3X1 1017 aaPredicted RBP16.53■□□□□ 0.24
PTBP1-216ENST00000590887 AFF2P51816 1311 aa16.52■□□□□ 0.24
PTBP1-216ENST00000590887 SIPA1L3O60292 1781 aaPredicted RBP16.52■□□□□ 0.24
PTBP1-216ENST00000590887 VPS72Q15906 364 aa16.52■□□□□ 0.24
PTBP1-216ENST00000590887 DDB1Q16531 1140 aa16.52■□□□□ 0.24
PTBP1-216ENST00000590887 NFATC2IPQ8NCF5 419 aa16.52■□□□□ 0.24
PTBP1-216ENST00000590887 DDX19BQ9UMR2 479 aa16.52■□□□□ 0.24
PTBP1-216ENST00000590887 USP21Q9UK80 565 aa16.51■□□□□ 0.23
PTBP1-216ENST00000590887 WNK3Q9BYP7 1800 aa16.51■□□□□ 0.23
PTBP1-216ENST00000590887 DISP2A7MBM2 1401 aa16.51■□□□□ 0.23
PTBP1-216ENST00000590887 KDM6AO15550 1401 aaPredicted RBP16.51■□□□□ 0.23
PTBP1-216ENST00000590887 MRC1P22897 1456 aa16.5■□□□□ 0.23
PTBP1-216ENST00000590887 SLC4A2P04920 1241 aa16.5■□□□□ 0.23
PTBP1-216ENST00000590887 MVPQ14764 893 aaKnown RBP16.5■□□□□ 0.23
PTBP1-216ENST00000590887 HDGFL1Q5TGJ6 251 aa16.5■□□□□ 0.23
PTBP1-216ENST00000590887 ZNF790Q6PG37 636 aa16.5■□□□□ 0.23
PTBP1-216ENST00000590887 FMNL2Q96PY5 1086 aa16.5■□□□□ 0.23
PTBP1-216ENST00000590887 RXRBP28702 533 aa16.49■□□□□ 0.23
PTBP1-216ENST00000590887 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.49■□□□□ 0.23
PTBP1-216ENST00000590887 TMOD3Q9NYL9 352 aa16.49■□□□□ 0.23
PTBP1-216ENST00000590887 TRIM27P14373 513 aa16.48■□□□□ 0.23
PTBP1-216ENST00000590887 C20orf194Q5TEA3 1177 aa16.48■□□□□ 0.23
PTBP1-216ENST00000590887 PANK1Q8TE04 598 aa16.48■□□□□ 0.23
PTBP1-216ENST00000590887 COG6Q9Y2V7 657 aa16.48■□□□□ 0.23
PTBP1-216ENST00000590887 TNS2Q63HR2 1409 aa16.47■□□□□ 0.23
PTBP1-216ENST00000590887 SNRPA1P09661 255 aaKnown RBP16.47■□□□□ 0.23
PTBP1-216ENST00000590887 CLUAP1Q96AJ1 413 aa16.47■□□□□ 0.23
PTBP1-216ENST00000590887 QTRT2Q9H974 415 aaKnown RBP16.47■□□□□ 0.23
PTBP1-216ENST00000590887 DBF4Q9UBU7 674 aaPredicted RBP16.47■□□□□ 0.23
PTBP1-216ENST00000590887 GIGYF1O75420 1035 aaPredicted RBP16.46■□□□□ 0.23
PTBP1-216ENST00000590887 KRT24Q2M2I5 525 aa16.46■□□□□ 0.23
PTBP1-216ENST00000590887 ITPRIPQ8IWB1 547 aa16.46■□□□□ 0.23
PTBP1-216ENST00000590887 SHANK3Q9BYB0 1731 aa16.45■□□□□ 0.22
PTBP1-216ENST00000590887 EIF2S2P20042 333 aaKnown RBP16.45■□□□□ 0.22
PTBP1-216ENST00000590887 RBM6P78332 1123 aaKnown RBP16.45■□□□□ 0.22
PTBP1-216ENST00000590887 B4GALNT3Q6L9W6 998 aa16.45■□□□□ 0.22
PTBP1-216ENST00000590887 TEX13AQ9BXU3 409 aaPredicted RBP16.45■□□□□ 0.22
PTBP1-216ENST00000590887 TRPC5Q9UL62 973 aaPredicted RBP16.45■□□□□ 0.22
PTBP1-216ENST00000590887 BCL9LQ86UU0 1499 aa16.45■□□□□ 0.22
PTBP1-216ENST00000590887 HEG1Q9ULI3 1381 aa16.44■□□□□ 0.22
PTBP1-216ENST00000590887 HYPKQ9NX55 129 aa16.44■□□□□ 0.22
PTBP1-216ENST00000590887 TCERG1O14776 1098 aaKnown RBP16.43■□□□□ 0.22
PTBP1-216ENST00000590887 DDX58O95786 925 aaKnown RBP16.43■□□□□ 0.22
PTBP1-216ENST00000590887 CCT4P50991 539 aaKnown RBP16.43■□□□□ 0.22
PTBP1-216ENST00000590887 ABCC4O15439 1325 aa16.43■□□□□ 0.22
PTBP1-216ENST00000590887 ERBB4Q15303 1308 aa16.43■□□□□ 0.22
PTBP1-216ENST00000590887 KCNQ3O43525 872 aa16.42■□□□□ 0.22
PTBP1-216ENST00000590887 FLIIQ13045 1269 aa16.42■□□□□ 0.22
PTBP1-216ENST00000590887 FKBP5Q13451 457 aaPredicted RBP16.42■□□□□ 0.22
PTBP1-216ENST00000590887 TMEM57Q8N5G2 664 aa16.42■□□□□ 0.22
PTBP1-216ENST00000590887 ATRNO75882 1429 aa16.42■□□□□ 0.22
PTBP1-216ENST00000590887 SLC39A6Q13433 755 aa16.41■□□□□ 0.22
PTBP1-216ENST00000590887 INTS3Q68E01 1043 aaKnown RBP16.41■□□□□ 0.22
PTBP1-216ENST00000590887 CENPQQ7L2Z9 268 aaPredicted RBP16.41■□□□□ 0.22
PTBP1-216ENST00000590887 VSIG10Q8N0Z9 540 aa16.41■□□□□ 0.22
PTBP1-216ENST00000590887 RWDD1Q9H446 243 aaPredicted RBP16.41■□□□□ 0.22
PTBP1-216ENST00000590887 A0A0G2JS52 829 aa16.4■□□□□ 0.22
PTBP1-216ENST00000590887 RLBP1P12271 317 aa16.4■□□□□ 0.22
PTBP1-216ENST00000590887 MYT1Q01538 1121 aa16.4■□□□□ 0.22
PTBP1-216ENST00000590887 GJD4Q96KN9 370 aaPredicted RBP16.4■□□□□ 0.22
PTBP1-216ENST00000590887 DDX21Q9NR30 783 aaKnown RBP eCLIP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms