RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 RIMBP3BA6NNM3 1639 aa13.77□□□□□ -0.21
SEH1L-208ENST00000590843 RIMBP3Q9UFD9 1639 aa13.77□□□□□ -0.21
SEH1L-208ENST00000590843 SLC4A2P04920 1241 aa13.77□□□□□ -0.21
SEH1L-208ENST00000590843 ORAI2Q96SN7 254 aa13.77□□□□□ -0.21
SEH1L-208ENST00000590843 B4GALNT3Q6L9W6 998 aa13.77□□□□□ -0.21
SEH1L-208ENST00000590843 NOL8Q76FK4 1167 aaKnown RBP13.77□□□□□ -0.21
SEH1L-208ENST00000590843 LRRFIP2Q9Y608 721 aaKnown RBP13.77□□□□□ -0.21
SEH1L-208ENST00000590843 IP6K1Q92551 441 aa13.76□□□□□ -0.21
SEH1L-208ENST00000590843 CWC25Q9NXE8 425 aaPredicted RBP13.76□□□□□ -0.21
SEH1L-208ENST00000590843 H3BQV1 296 aa13.76□□□□□ -0.21
SEH1L-208ENST00000590843 SURF6O75683 361 aaKnown RBP13.76□□□□□ -0.21
SEH1L-208ENST00000590843 EAPPQ56P03 285 aaPredicted RBP13.76□□□□□ -0.21
SEH1L-208ENST00000590843 IFFO2Q5TF58 517 aa13.76□□□□□ -0.21
SEH1L-208ENST00000590843 FLT4P35916 1363 aa13.76□□□□□ -0.21
SEH1L-208ENST00000590843 TARBP1Q13395 1621 aaKnown RBP13.76□□□□□ -0.21
SEH1L-208ENST00000590843 DZIP3Q86Y13 1208 aaKnown RBP13.76□□□□□ -0.21
SEH1L-208ENST00000590843 FSD1Q9BTV5 496 aa13.75□□□□□ -0.21
SEH1L-208ENST00000590843 VTI1AQ96AJ9 217 aa13.75□□□□□ -0.21
SEH1L-208ENST00000590843 ANKRD36BQ8N2N9 1353 aa13.75□□□□□ -0.21
SEH1L-208ENST00000590843 CNTROBQ8N137 903 aa13.74□□□□□ -0.21
SEH1L-208ENST00000590843 ZNF408Q9H9D4 720 aa13.74□□□□□ -0.21
SEH1L-208ENST00000590843 ABCF2Q9UG63 623 aa13.74□□□□□ -0.21
SEH1L-208ENST00000590843 REC8O95072 547 aa13.74□□□□□ -0.21
SEH1L-208ENST00000590843 ST18O60284 1047 aa13.74□□□□□ -0.21
SEH1L-208ENST00000590843 HSPA1LP34931 641 aa13.74□□□□□ -0.21
SEH1L-208ENST00000590843 PPP4R3AQ6IN85 833 aa13.74□□□□□ -0.21
SEH1L-208ENST00000590843 KDM5DQ9BY66 1539 aa13.74□□□□□ -0.21
SEH1L-208ENST00000590843 TRIM37O94972 964 aa13.73□□□□□ -0.21
SEH1L-208ENST00000590843 GPTP24298 496 aa13.73□□□□□ -0.21
SEH1L-208ENST00000590843 EFCAB6Q5THR3 1501 aa13.73□□□□□ -0.21
SEH1L-208ENST00000590843 MAST3O60307 1309 aa13.73□□□□□ -0.21
SEH1L-208ENST00000590843 MAP3K12Q12852 859 aa13.73□□□□□ -0.21
SEH1L-208ENST00000590843 ANKRD45Q5TZF3 282 aa13.73□□□□□ -0.21
SEH1L-208ENST00000590843 PPP2R1AP30153 589 aa13.73□□□□□ -0.21
SEH1L-208ENST00000590843 BRDTQ58F21 947 aaPredicted RBP13.72□□□□□ -0.21
SEH1L-208ENST00000590843 A2ML1A8K2U0 1454 aa13.72□□□□□ -0.21
SEH1L-208ENST00000590843 MYD88Q99836 296 aa13.72□□□□□ -0.21
SEH1L-208ENST00000590843 CTNNA3Q9UI47 895 aa13.72□□□□□ -0.21
SEH1L-208ENST00000590843 YTHDC2Q9H6S0 1430 aaKnown RBP13.72□□□□□ -0.21
SEH1L-208ENST00000590843 PLCG2P16885 1265 aa13.71□□□□□ -0.21
SEH1L-208ENST00000590843 TDO2P48775 406 aa13.71□□□□□ -0.21
SEH1L-208ENST00000590843 ZBTB3Q9H5J0 574 aa13.71□□□□□ -0.21
SEH1L-208ENST00000590843 HOOK1Q9UJC3 728 aaKnown RBP13.71□□□□□ -0.21
SEH1L-208ENST00000590843 PPP4R2Q9NY27 417 aa13.71□□□□□ -0.21
SEH1L-208ENST00000590843 MTMR7Q9Y216 660 aa13.71□□□□□ -0.21
SEH1L-208ENST00000590843 CUL5Q93034 780 aa13.71□□□□□ -0.22
SEH1L-208ENST00000590843 ABCC11Q96J66 1382 aa13.7□□□□□ -0.22
SEH1L-208ENST00000590843 TPRNQ4KMQ1 711 aa13.7□□□□□ -0.22
SEH1L-208ENST00000590843 TRIM44Q96DX7 344 aaPredicted RBP13.7□□□□□ -0.22
SEH1L-208ENST00000590843 SCLT1Q96NL6 688 aa13.7□□□□□ -0.22
SEH1L-208ENST00000590843 SLC5A4Q9NY91 659 aa13.7□□□□□ -0.22
SEH1L-208ENST00000590843 RBM26Q5T8P6 1007 aaKnown RBP13.7□□□□□ -0.22
SEH1L-208ENST00000590843 MIER1Q8N108 512 aa13.7□□□□□ -0.22
SEH1L-208ENST00000590843 DCPSQ96C86 337 aaKnown RBP13.7□□□□□ -0.22
SEH1L-208ENST00000590843 MKNK2Q9HBH9 465 aa13.7□□□□□ -0.22
SEH1L-208ENST00000590843 TNFAIP1Q13829 316 aa13.7□□□□□ -0.22
SEH1L-208ENST00000590843 PTMSP20962 102 aa13.69□□□□□ -0.22
SEH1L-208ENST00000590843 CC2D2BQ6DHV5 1058 aa13.69□□□□□ -0.22
SEH1L-208ENST00000590843 SH2D4AQ9H788 454 aa13.69□□□□□ -0.22
SEH1L-208ENST00000590843 PSMA5P28066 241 aa13.69□□□□□ -0.22
SEH1L-208ENST00000590843 VEZTQ9HBM0 779 aa13.69□□□□□ -0.22
SEH1L-208ENST00000590843 MVPQ14764 893 aaKnown RBP13.69□□□□□ -0.22
SEH1L-208ENST00000590843 ZNF76P36508 570 aa13.69□□□□□ -0.22
SEH1L-208ENST00000590843 PICK1Q9NRD5 415 aa13.69□□□□□ -0.22
SEH1L-208ENST00000590843 NKTRP30414 1462 aaKnown RBP13.69□□□□□ -0.22
SEH1L-208ENST00000590843 ZNF444Q8N0Y2 327 aaPredicted RBP13.68□□□□□ -0.22
SEH1L-208ENST00000590843 PAF1Q8N7H5 531 aa13.68□□□□□ -0.22
SEH1L-208ENST00000590843 ATP6V1DQ9Y5K8 247 aa13.68□□□□□ -0.22
SEH1L-208ENST00000590843 GLRX3O76003 335 aaKnown RBP13.68□□□□□ -0.22
SEH1L-208ENST00000590843 IRX6P78412 446 aaPredicted RBP13.68□□□□□ -0.22
SEH1L-208ENST00000590843 WDR63Q8IWG1 891 aa13.68□□□□□ -0.22
SEH1L-208ENST00000590843 ANO2Q9NQ90 1003 aa13.68□□□□□ -0.22
SEH1L-208ENST00000590843 UQCRFS1P1P0C7P4 283 aa13.68□□□□□ -0.22
SEH1L-208ENST00000590843 PRIM1P49642 420 aaKnown RBP13.68□□□□□ -0.22
SEH1L-208ENST00000590843 RFX1P22670 979 aa13.67□□□□□ -0.22
SEH1L-208ENST00000590843 LTKP29376 864 aa13.67□□□□□ -0.22
SEH1L-208ENST00000590843 PABPC4Q13310 644 aaKnown RBP eCLIP13.67□□□□□ -0.222e-6■■■■□ 20
SEH1L-208ENST00000590843 DPP8Q6V1X1 898 aaPredicted RBP13.67□□□□□ -0.22
SEH1L-208ENST00000590843 SULF1Q8IWU6 871 aa13.67□□□□□ -0.22
SEH1L-208ENST00000590843 KDM2BQ8NHM5 1336 aa13.67□□□□□ -0.22
SEH1L-208ENST00000590843 PTMAP06454 111 aaKnown RBP13.67□□□□□ -0.22
SEH1L-208ENST00000590843 TTF1Q15361 905 aaPredicted RBP13.67□□□□□ -0.22
SEH1L-208ENST00000590843 TPD52L1Q16890 204 aaPredicted RBP13.67□□□□□ -0.22
SEH1L-208ENST00000590843 KIF7Q2M1P5 1343 aa13.67□□□□□ -0.22
SEH1L-208ENST00000590843 GRIPAP1Q4V328 841 aa13.67□□□□□ -0.22
SEH1L-208ENST00000590843 RRP12Q5JTH9 1297 aaKnown RBP13.67□□□□□ -0.22
SEH1L-208ENST00000590843 IVNS1ABPQ9Y6Y0 642 aa13.67□□□□□ -0.22
SEH1L-208ENST00000590843 UBAC1Q9BSL1 405 aa13.67□□□□□ -0.22
SEH1L-208ENST00000590843 EMILIN1Q9Y6C2 1016 aa13.67□□□□□ -0.22
SEH1L-208ENST00000590843 KDM5CP41229 1560 aa13.67□□□□□ -0.22
SEH1L-208ENST00000590843 DALRD3Q5D0E6 543 aaKnown RBP13.67□□□□□ -0.22
SEH1L-208ENST00000590843 DUSP27Q5VZP5 1158 aa13.67□□□□□ -0.22
SEH1L-208ENST00000590843 IFT57Q9NWB7 429 aa13.67□□□□□ -0.22
SEH1L-208ENST00000590843 NSFL1CQ9UNZ2 370 aaKnown RBP13.67□□□□□ -0.22
SEH1L-208ENST00000590843 CFAP43Q8NDM7 1665 aa13.66□□□□□ -0.22
SEH1L-208ENST00000590843 CDK5RAP3Q96JB5 506 aa13.66□□□□□ -0.22
SEH1L-208ENST00000590843 TMOD4Q9NZQ9 345 aa13.66□□□□□ -0.22
SEH1L-208ENST00000590843 HECW2Q9P2P5 1572 aa13.66□□□□□ -0.22
SEH1L-208ENST00000590843 LDHAL6AQ6ZMR3 332 aa13.66□□□□□ -0.22
SEH1L-208ENST00000590843 C2CD5Q86YS7 1000 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms