RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 ITGB4P16144 1822 aa22.01■■□□□ 1.11
GCDH-213ENST00000590627 MSH5O43196 834 aa22■■□□□ 1.11
GCDH-213ENST00000590627 FCHSD2O94868 740 aa22■■□□□ 1.11
GCDH-213ENST00000590627 FLAD1Q8NFF5 587 aa22■■□□□ 1.11
GCDH-213ENST00000590627 SMARCC1Q92922 1105 aaPredicted RBP22■■□□□ 1.11
GCDH-213ENST00000590627 GOLGB1Q14789 3259 aaKnown RBP22■■□□□ 1.11
GCDH-213ENST00000590627 KDRP35968 1356 aa21.99■■□□□ 1.11
GCDH-213ENST00000590627 NKX1-1Q15270 411 aaPredicted RBP21.99■■□□□ 1.11
GCDH-213ENST00000590627 SPG7Q9UQ90 795 aa21.99■■□□□ 1.11
GCDH-213ENST00000590627 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.98■■□□□ 1.11
GCDH-213ENST00000590627 NLGN2Q8NFZ4 835 aa21.97■■□□□ 1.11
GCDH-213ENST00000590627 RSPH6AQ9H0K4 717 aa21.97■■□□□ 1.11
GCDH-213ENST00000590627 PNNQ9H307 717 aaKnown RBP21.97■■□□□ 1.11
GCDH-213ENST00000590627 SULT6B1Q6IMI4 303 aa21.96■■□□□ 1.11
GCDH-213ENST00000590627 C4BP0C0L5 1744 aa21.95■■□□□ 1.1
GCDH-213ENST00000590627 PLEKHF1Q96S99 279 aa21.95■■□□□ 1.1
GCDH-213ENST00000590627 PLEKHG2Q9H7P9 1386 aa21.95■■□□□ 1.1
GCDH-213ENST00000590627 HMOX1P09601 288 aa21.94■■□□□ 1.1
GCDH-213ENST00000590627 AEBP1Q8IUX7 1158 aa21.94■■□□□ 1.1
GCDH-213ENST00000590627 PIGBQ92521 554 aa21.94■■□□□ 1.1
GCDH-213ENST00000590627 PELP1Q8IZL8 1130 aaKnown RBP21.93■■□□□ 1.1
GCDH-213ENST00000590627 RUNDC1Q96C34 613 aa21.93■■□□□ 1.1
GCDH-213ENST00000590627 GRIN3BO60391 1043 aa21.92■■□□□ 1.1
GCDH-213ENST00000590627 MSL1Q68DK7 614 aa21.92■■□□□ 1.1
GCDH-213ENST00000590627 AK7Q96M32 723 aa21.92■■□□□ 1.1
GCDH-213ENST00000590627 PRKAR2BP31323 418 aa21.91■■□□□ 1.1
GCDH-213ENST00000590627 IFNL2Q8IZJ0 200 aa21.91■■□□□ 1.1
GCDH-213ENST00000590627 CD2APQ9Y5K6 639 aa21.91■■□□□ 1.1
GCDH-213ENST00000590627 UBR3Q6ZT12 1888 aa21.91■■□□□ 1.1
GCDH-213ENST00000590627 PHKG2P15735 406 aa21.89■■□□□ 1.09
GCDH-213ENST00000590627 CCDC146Q8IYE0 955 aa21.89■■□□□ 1.09
GCDH-213ENST00000590627 TMOD3Q9NYL9 352 aa21.89■■□□□ 1.09
GCDH-213ENST00000590627 LOC102724428A0A0B4J2F2 783 aa21.88■■□□□ 1.09
GCDH-213ENST00000590627 SSFA2P28290 1259 aa21.88■■□□□ 1.09
GCDH-213ENST00000590627 SIK1P57059 783 aa21.88■■□□□ 1.09
GCDH-213ENST00000590627 YBX3P16989 372 aaKnown RBP eCLIP21.87■■□□□ 1.09
GCDH-213ENST00000590627 MAPK8IP3Q9UPT6 1336 aa21.86■■□□□ 1.09
GCDH-213ENST00000590627 NEFMP07197 916 aa21.86■■□□□ 1.09
GCDH-213ENST00000590627 C1QTNF8P60827 252 aa21.86■■□□□ 1.09
GCDH-213ENST00000590627 NCBP3Q53F19 620 aaKnown RBP21.86■■□□□ 1.09
GCDH-213ENST00000590627 PHACTR3Q96KR7 559 aa21.86■■□□□ 1.09
GCDH-213ENST00000590627 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.85■■□□□ 1.09
GCDH-213ENST00000590627 AMIGO3Q86WK7 504 aa21.85■■□□□ 1.09
GCDH-213ENST00000590627 NGEFQ8N5V2 710 aa21.85■■□□□ 1.09
GCDH-213ENST00000590627 APAF1O14727 1248 aa21.84■■□□□ 1.09
GCDH-213ENST00000590627 LINC00116Q8NCU8 138 aa21.84■■□□□ 1.09
GCDH-213ENST00000590627 ASAP1Q9ULH1 1129 aa21.84■■□□□ 1.09
GCDH-213ENST00000590627 PHF14O94880 888 aa21.83■■□□□ 1.09
GCDH-213ENST00000590627 ATP6V1AP38606 617 aa21.82■■□□□ 1.08
GCDH-213ENST00000590627 AMOTQ4VCS5 1084 aa21.82■■□□□ 1.08
GCDH-213ENST00000590627 ATG3Q9NT62 314 aa21.82■■□□□ 1.08
GCDH-213ENST00000590627 ERVV-2B6SEH9 535 aa21.81■■□□□ 1.08
GCDH-213ENST00000590627 HSP90AB1P08238 724 aaKnown RBP21.81■■□□□ 1.08
GCDH-213ENST00000590627 TMPOP42166 694 aaKnown RBP21.81■■□□□ 1.08
GCDH-213ENST00000590627 HNRNPUQ00839 825 aaKnown RBP eCLIP21.81■■□□□ 1.08
GCDH-213ENST00000590627 ITPK1Q13572 414 aa21.81■■□□□ 1.08
GCDH-213ENST00000590627 ZNF831Q5JPB2 1677 aa21.81■■□□□ 1.08
GCDH-213ENST00000590627 GIGYF1O75420 1035 aaPredicted RBP21.8■■□□□ 1.08
GCDH-213ENST00000590627 NFE2L2Q16236 605 aa21.8■■□□□ 1.08
GCDH-213ENST00000590627 PLEKHO1Q53GL0 409 aaPredicted RBP21.8■■□□□ 1.08
GCDH-213ENST00000590627 GAS2L2Q8NHY3 880 aa21.8■■□□□ 1.08
GCDH-213ENST00000590627 GNPATO15228 680 aa21.79■■□□□ 1.08
GCDH-213ENST00000590627 MTHFSDQ2M296 383 aaKnown RBP21.79■■□□□ 1.08
GCDH-213ENST00000590627 SMIM5Q71RC9 77 aa21.79■■□□□ 1.08
GCDH-213ENST00000590627 DCAF5Q96JK2 942 aa21.79■■□□□ 1.08
GCDH-213ENST00000590627 SENP3-EIF4A1A0A087X0R7 540 aa21.78■■□□□ 1.08
GCDH-213ENST00000590627 CCDC27Q2M243 656 aa21.78■■□□□ 1.08
GCDH-213ENST00000590627 YTHDC1Q96MU7 727 aaKnown RBP21.76■■□□□ 1.07
GCDH-213ENST00000590627 ZBED9Q6R2W3 1325 aa21.76■■□□□ 1.07
GCDH-213ENST00000590627 RIPK4P57078 832 aa21.75■■□□□ 1.07
GCDH-213ENST00000590627 RRP7AQ9Y3A4 280 aaKnown RBP21.75■■□□□ 1.07
GCDH-213ENST00000590627 HTATSF1O43719 755 aaKnown RBP21.74■■□□□ 1.07
GCDH-213ENST00000590627 RTCBQ9Y3I0 505 aaKnown RBP21.74■■□□□ 1.07
GCDH-213ENST00000590627 KDM6AO15550 1401 aaPredicted RBP21.73■■□□□ 1.07
GCDH-213ENST00000590627 COL5A3P25940 1745 aaPredicted RBP21.73■■□□□ 1.07
GCDH-213ENST00000590627 LMOD3Q0VAK6 560 aa21.73■■□□□ 1.07
GCDH-213ENST00000590627 RC3H1Q5TC82 1133 aaKnown RBP21.73■■□□□ 1.07
GCDH-213ENST00000590627 ZNF530Q6P9A1 599 aaPredicted RBP21.73■■□□□ 1.07
GCDH-213ENST00000590627 SLC4A9Q96Q91 983 aa21.73■■□□□ 1.07
GCDH-213ENST00000590627 TRIM35Q9UPQ4 493 aa21.73■■□□□ 1.07
GCDH-213ENST00000590627 ZNF521Q96K83 1311 aa21.73■■□□□ 1.07
GCDH-213ENST00000590627 ATP10DQ9P241 1426 aa21.72■■□□□ 1.07
GCDH-213ENST00000590627 ADRA2BP18089 450 aa21.72■■□□□ 1.07
GCDH-213ENST00000590627 NEUROD2Q15784 382 aa21.72■■□□□ 1.07
GCDH-213ENST00000590627 AKAP4Q5JQC9 854 aa21.72■■□□□ 1.07
GCDH-213ENST00000590627 TRAPPC3LQ5T215 181 aa21.72■■□□□ 1.07
GCDH-213ENST00000590627 RBM42Q9BTD8 480 aaKnown RBP21.72■■□□□ 1.07
GCDH-213ENST00000590627 CABP4P57796 275 aa21.71■■□□□ 1.07
GCDH-213ENST00000590627 WWC1Q8IX03 1113 aa21.71■■□□□ 1.07
GCDH-213ENST00000590627 NLGN1Q8N2Q7 840 aa21.71■■□□□ 1.07
GCDH-213ENST00000590627 CNTNAP4Q9C0A0 1308 aa21.71■■□□□ 1.07
GCDH-213ENST00000590627 ADCY9O60503 1353 aa21.71■■□□□ 1.07
GCDH-213ENST00000590627 GNAT3A8MTJ3 354 aa21.7■■□□□ 1.06
GCDH-213ENST00000590627 MMP10P09238 476 aa21.7■■□□□ 1.06
GCDH-213ENST00000590627 C1orf141Q5JVX7 400 aa21.7■■□□□ 1.06
GCDH-213ENST00000590627 SALL2Q9Y467 1007 aaPredicted RBP21.7■■□□□ 1.06
GCDH-213ENST00000590627 KIF13BQ9NQT8 1826 aa21.7■■□□□ 1.06
GCDH-213ENST00000590627 RPS6KA4O75676 772 aa21.68■■□□□ 1.06
GCDH-213ENST00000590627 WDR63Q8IWG1 891 aa21.68■■□□□ 1.06
GCDH-213ENST00000590627 ARHGEF1Q92888 912 aaKnown RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms