RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 SLC52A2Q9HAB3 445 aa19.71■□□□□ 0.75
DDX39A-211ENST00000590239 LAS1LQ9Y4W2 734 aaKnown RBP19.71■□□□□ 0.75
DDX39A-211ENST00000590239 VIRMAQ69YN4 1812 aaKnown RBP19.71■□□□□ 0.75
DDX39A-211ENST00000590239 FANCIQ9NVI1 1328 aa19.71■□□□□ 0.75
DDX39A-211ENST00000590239 RXRBP28702 533 aa19.7■□□□□ 0.74
DDX39A-211ENST00000590239 CABP4P57796 275 aa19.69■□□□□ 0.74
DDX39A-211ENST00000590239 TSR2Q969E8 191 aaKnown RBP19.69■□□□□ 0.74
DDX39A-211ENST00000590239 MBIPQ9NS73 344 aa19.69■□□□□ 0.74
DDX39A-211ENST00000590239 SIPA1L3O60292 1781 aaPredicted RBP19.68■□□□□ 0.74
DDX39A-211ENST00000590239 TSPYL4Q9UJ04 414 aa19.68■□□□□ 0.74
DDX39A-211ENST00000590239 NFATC2IPQ8NCF5 419 aa19.67■□□□□ 0.74
DDX39A-211ENST00000590239 BCL9O00512 1426 aa19.67■□□□□ 0.74
DDX39A-211ENST00000590239 BTBD11A6QL63 1104 aa19.66■□□□□ 0.74
DDX39A-211ENST00000590239 TOGARAM1Q9Y4F4 1720 aa19.65■□□□□ 0.74
DDX39A-211ENST00000590239 MIS18AQ9NYP9 233 aa19.65■□□□□ 0.74
DDX39A-211ENST00000590239 CT47B1P0C2W7 299 aaPredicted RBP19.64■□□□□ 0.73
DDX39A-211ENST00000590239 TMOD3Q9NYL9 352 aa19.64■□□□□ 0.73
DDX39A-211ENST00000590239 EXOSC9Q06265 439 aaKnown RBP19.63■□□□□ 0.73
DDX39A-211ENST00000590239 KRT27Q7Z3Y8 459 aa19.63■□□□□ 0.73
DDX39A-211ENST00000590239 KDM3BQ7LBC6 1761 aa19.62■□□□□ 0.73
DDX39A-211ENST00000590239 PRIM1P49642 420 aaKnown RBP19.61■□□□□ 0.73
DDX39A-211ENST00000590239 ZNF790Q6PG37 636 aa19.61■□□□□ 0.73
DDX39A-211ENST00000590239 PIGBQ92521 554 aa19.61■□□□□ 0.73
DDX39A-211ENST00000590239 DOT1LQ8TEK3 1739 aa19.61■□□□□ 0.73
DDX39A-211ENST00000590239 RGS12O14924 1447 aa19.6■□□□□ 0.73
DDX39A-211ENST00000590239 ITGB4P16144 1822 aa19.6■□□□□ 0.73
DDX39A-211ENST00000590239 SOS1Q07889 1333 aaPredicted RBP19.6■□□□□ 0.73
DDX39A-211ENST00000590239 BRWD3Q6RI45 1802 aa19.6■□□□□ 0.73
DDX39A-211ENST00000590239 EIF4A1P60842 406 aaKnown RBP19.59■□□□□ 0.73
DDX39A-211ENST00000590239 C8orf58Q8NAV2 365 aa19.59■□□□□ 0.73
DDX39A-211ENST00000590239 KCNQ3O43525 872 aa19.58■□□□□ 0.72
DDX39A-211ENST00000590239 FAM196AQ6ZSG2 479 aa19.58■□□□□ 0.72
DDX39A-211ENST00000590239 TTC5Q8N0Z6 440 aa19.58■□□□□ 0.72
DDX39A-211ENST00000590239 ZNF428Q96B54 188 aa19.58■□□□□ 0.72
DDX39A-211ENST00000590239 SYTL4Q96C24 671 aaPredicted RBP19.58■□□□□ 0.72
DDX39A-211ENST00000590239 RCAN3Q9UKA8 241 aa19.58■□□□□ 0.72
DDX39A-211ENST00000590239 PAPPAQ13219 1627 aa19.58■□□□□ 0.72
DDX39A-211ENST00000590239 SLC39A6Q13433 755 aa19.57■□□□□ 0.72
DDX39A-211ENST00000590239 TWISTNBQ3B726 338 aaPredicted RBP19.57■□□□□ 0.72
DDX39A-211ENST00000590239 ACSBG1Q96GR2 724 aa19.57■□□□□ 0.72
DDX39A-211ENST00000590239 HEG1Q9ULI3 1381 aa19.57■□□□□ 0.72
DDX39A-211ENST00000590239 VAMP4O75379 141 aa19.56■□□□□ 0.72
DDX39A-211ENST00000590239 HOXB7P09629 217 aa19.56■□□□□ 0.72
DDX39A-211ENST00000590239 FAM182BQ5T319 152 aa19.56■□□□□ 0.72
DDX39A-211ENST00000590239 TSPYL6Q8N831 410 aa19.56■□□□□ 0.72
DDX39A-211ENST00000590239 FMNL2Q96PY5 1086 aa19.55■□□□□ 0.72
DDX39A-211ENST00000590239 ATG3Q9NT62 314 aa19.55■□□□□ 0.72
DDX39A-211ENST00000590239 NHSQ6T4R5 1651 aa19.55■□□□□ 0.72
DDX39A-211ENST00000590239 KCNQ2O43526 872 aa19.54■□□□□ 0.72
DDX39A-211ENST00000590239 KRT24Q2M2I5 525 aa19.54■□□□□ 0.72
DDX39A-211ENST00000590239 ZNF496Q96IT1 587 aaPredicted RBP19.54■□□□□ 0.72
DDX39A-211ENST00000590239 CHMP4AQ9BY43 222 aa19.54■□□□□ 0.72
DDX39A-211ENST00000590239 ASAP1Q9ULH1 1129 aa19.54■□□□□ 0.72
DDX39A-211ENST00000590239 UBR2Q8IWV8 1755 aa19.54■□□□□ 0.72
DDX39A-211ENST00000590239 KCPQ6ZWJ8 1503 aa19.53■□□□□ 0.72
DDX39A-211ENST00000590239 ELL2O00472 640 aaPredicted RBP19.53■□□□□ 0.72
DDX39A-211ENST00000590239 GIGYF1O75420 1035 aaPredicted RBP19.53■□□□□ 0.72
DDX39A-211ENST00000590239 SMARCC1Q92922 1105 aaPredicted RBP19.53■□□□□ 0.72
DDX39A-211ENST00000590239 KAT6BQ8WYB5 2073 aa19.52■□□□□ 0.72
DDX39A-211ENST00000590239 RARSP54136 660 aaKnown RBP19.52■□□□□ 0.72
DDX39A-211ENST00000590239 BCL11BQ9C0K0 894 aaPredicted RBP19.52■□□□□ 0.72
DDX39A-211ENST00000590239 SBF2Q86WG5 1849 aa19.52■□□□□ 0.72
DDX39A-211ENST00000590239 SNRPA1P09661 255 aaKnown RBP19.51■□□□□ 0.71
DDX39A-211ENST00000590239 ALDH1L2Q3SY69 923 aa19.51■□□□□ 0.71
DDX39A-211ENST00000590239 VSIG10Q8N0Z9 540 aa19.5■□□□□ 0.71
DDX39A-211ENST00000590239 PTCD1O75127 700 aaKnown RBP19.49■□□□□ 0.71
DDX39A-211ENST00000590239 CCDC30Q5VVM6 783 aa19.48■□□□□ 0.71
DDX39A-211ENST00000590239 SSH1Q8WYL5 1049 aa19.48■□□□□ 0.71
DDX39A-211ENST00000590239 PALLDQ8WX93 1383 aa19.47■□□□□ 0.71
DDX39A-211ENST00000590239 BTAF1O14981 1849 aa19.47■□□□□ 0.71
DDX39A-211ENST00000590239 BRPF1P55201 1214 aaPredicted RBP19.47■□□□□ 0.71
DDX39A-211ENST00000590239 HDGFL1Q5TGJ6 251 aa19.47■□□□□ 0.71
DDX39A-211ENST00000590239 PTF1AQ7RTS3 328 aa19.47■□□□□ 0.71
DDX39A-211ENST00000590239 TEX13AQ9BXU3 409 aaPredicted RBP19.47■□□□□ 0.71
DDX39A-211ENST00000590239 RBM42Q9BTD8 480 aaKnown RBP19.46■□□□□ 0.71
DDX39A-211ENST00000590239 SMC4Q9NTJ3 1288 aa19.46■□□□□ 0.71
DDX39A-211ENST00000590239 RNF123Q5XPI4 1314 aa19.46■□□□□ 0.71
DDX39A-211ENST00000590239 STK31Q9BXU1 1019 aa19.45■□□□□ 0.7
DDX39A-211ENST00000590239 SUPT16HQ9Y5B9 1047 aaKnown RBP19.45■□□□□ 0.7
DDX39A-211ENST00000590239 C5P01031 1676 aa19.44■□□□□ 0.7
DDX39A-211ENST00000590239 LOC102724428A0A0B4J2F2 783 aa19.44■□□□□ 0.7
DDX39A-211ENST00000590239 PRAMEF22A3QJZ6 481 aa19.44■□□□□ 0.7
DDX39A-211ENST00000590239 BCAR3O75815 825 aa19.44■□□□□ 0.7
DDX39A-211ENST00000590239 TRIM37O94972 964 aa19.44■□□□□ 0.7
DDX39A-211ENST00000590239 SIK1P57059 783 aa19.44■□□□□ 0.7
DDX39A-211ENST00000590239 ZNF831Q5JPB2 1677 aa19.43■□□□□ 0.7
DDX39A-211ENST00000590239 LAMB4A4D0S4 1761 aa19.43■□□□□ 0.7
DDX39A-211ENST00000590239 EIF2S2P20042 333 aaKnown RBP19.43■□□□□ 0.7
DDX39A-211ENST00000590239 MRPL50Q8N5N7 158 aaKnown RBP19.43■□□□□ 0.7
DDX39A-211ENST00000590239 SLC4A9Q96Q91 983 aa19.43■□□□□ 0.7
DDX39A-211ENST00000590239 BCL2L13Q9BXK5 485 aa19.43■□□□□ 0.7
DDX39A-211ENST00000590239 USP16Q9Y5T5 823 aa19.43■□□□□ 0.7
DDX39A-211ENST00000590239 ERBB4Q15303 1308 aa19.43■□□□□ 0.7
DDX39A-211ENST00000590239 CICQ96RK0 1608 aaPredicted RBP19.43■□□□□ 0.7
DDX39A-211ENST00000590239 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.42■□□□□ 0.7
DDX39A-211ENST00000590239 DBF4Q9UBU7 674 aaPredicted RBP19.42■□□□□ 0.7
DDX39A-211ENST00000590239 KIF16BQ96L93 1317 aa19.42■□□□□ 0.7
DDX39A-211ENST00000590239 TCERG1O14776 1098 aaKnown RBP19.41■□□□□ 0.7
DDX39A-211ENST00000590239 STARD3NLO95772 234 aa19.41■□□□□ 0.7
DDX39A-211ENST00000590239 RRP1P56182 461 aaKnown RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms