RNA–Protein interactions for RNA: ENST00000587197.1

DNMT1-212, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-212ENST00000587197 ITGB4P16144 1822 aa22.92■■□□□ 1.26
DNMT1-212ENST00000587197 DCAF8L1A6NGE4 600 aa22.91■■□□□ 1.26
DNMT1-212ENST00000587197 NEFMP07197 916 aa22.91■■□□□ 1.26
DNMT1-212ENST00000587197 MRS2Q9HD23 443 aa22.91■■□□□ 1.26
DNMT1-212ENST00000587197 ADAMTS8Q9UP79 889 aa22.9■■□□□ 1.26
DNMT1-212ENST00000587197 TOGARAM1Q9Y4F4 1720 aa22.9■■□□□ 1.26
DNMT1-212ENST00000587197 QSER1Q2KHR3 1735 aa22.89■■□□□ 1.26
DNMT1-212ENST00000587197 ERVV-2B6SEH9 535 aa22.89■■□□□ 1.25
DNMT1-212ENST00000587197 PTGER2P43116 358 aa22.89■■□□□ 1.25
DNMT1-212ENST00000587197 PNPLA7Q6ZV29 1317 aa22.88■■□□□ 1.25
DNMT1-212ENST00000587197 PNISRQ8TF01 805 aaKnown RBP22.88■■□□□ 1.25
DNMT1-212ENST00000587197 MSH5O43196 834 aa22.86■■□□□ 1.25
DNMT1-212ENST00000587197 FLAD1Q8NFF5 587 aa22.86■■□□□ 1.25
DNMT1-212ENST00000587197 MAPK8IP3Q9UPT6 1336 aa22.85■■□□□ 1.25
DNMT1-212ENST00000587197 KDM6AO15550 1401 aaPredicted RBP22.85■■□□□ 1.25
DNMT1-212ENST00000587197 GNAT3A8MTJ3 354 aa22.85■■□□□ 1.25
DNMT1-212ENST00000587197 CCER2I3L3R5 266 aa22.85■■□□□ 1.25
DNMT1-212ENST00000587197 POLD1P28340 1107 aa22.85■■□□□ 1.25
DNMT1-212ENST00000587197 MAP3K5Q99683 1374 aa22.85■■□□□ 1.25
DNMT1-212ENST00000587197 LOC102724428A0A0B4J2F2 783 aa22.84■■□□□ 1.25
DNMT1-212ENST00000587197 HTATSF1O43719 755 aaKnown RBP22.84■■□□□ 1.25
DNMT1-212ENST00000587197 SIK1P57059 783 aa22.84■■□□□ 1.25
DNMT1-212ENST00000587197 CABP4P57796 275 aa22.84■■□□□ 1.25
DNMT1-212ENST00000587197 RUNDC1Q96C34 613 aa22.84■■□□□ 1.25
DNMT1-212ENST00000587197 ARXQ96QS3 562 aa22.84■■□□□ 1.25
DNMT1-212ENST00000587197 SGIP1Q9BQI5 828 aa22.84■■□□□ 1.25
DNMT1-212ENST00000587197 C5P01031 1676 aa22.84■■□□□ 1.25
DNMT1-212ENST00000587197 RNMTO43148 476 aaKnown RBP22.83■■□□□ 1.25
DNMT1-212ENST00000587197 AK7Q96M32 723 aa22.83■■□□□ 1.25
DNMT1-212ENST00000587197 ASAP1Q9ULH1 1129 aa22.83■■□□□ 1.25
DNMT1-212ENST00000587197 NFE2L2Q16236 605 aa22.82■■□□□ 1.24
DNMT1-212ENST00000587197 ATP6V1AP38606 617 aa22.81■■□□□ 1.24
DNMT1-212ENST00000587197 ATG3Q9NT62 314 aa22.81■■□□□ 1.24
DNMT1-212ENST00000587197 COL23A1Q86Y22 540 aaPredicted RBP22.8■■□□□ 1.24
DNMT1-212ENST00000587197 FHDC1Q9C0D6 1143 aaPredicted RBP22.8■■□□□ 1.24
DNMT1-212ENST00000587197 LGR6Q9HBX8 967 aa22.8■■□□□ 1.24
DNMT1-212ENST00000587197 TAF1LQ8IZX4 1826 aa22.8■■□□□ 1.24
DNMT1-212ENST00000587197 IL17REQ8NFR9 667 aa22.79■■□□□ 1.24
DNMT1-212ENST00000587197 SYT17Q9BSW7 474 aa22.79■■□□□ 1.24
DNMT1-212ENST00000587197 TUBGCP6Q96RT7 1819 aa22.79■■□□□ 1.24
DNMT1-212ENST00000587197 CEMIPQ8WUJ3 1361 aa22.78■■□□□ 1.24
DNMT1-212ENST00000587197 ADAMTS7Q9UKP4 1686 aa22.78■■□□□ 1.24
DNMT1-212ENST00000587197 CCDC146Q8IYE0 955 aa22.78■■□□□ 1.24
DNMT1-212ENST00000587197 SLC52A2Q9HAB3 445 aa22.78■■□□□ 1.24
DNMT1-212ENST00000587197 C4BP0C0L5 1744 aa22.77■■□□□ 1.24
DNMT1-212ENST00000587197 TMPOP42166 694 aaKnown RBP22.77■■□□□ 1.24
DNMT1-212ENST00000587197 RTF1Q92541 710 aaKnown RBP22.77■■□□□ 1.24
DNMT1-212ENST00000587197 RBM42Q9BTD8 480 aaKnown RBP22.76■■□□□ 1.23
DNMT1-212ENST00000587197 MRC1P22897 1456 aa22.76■■□□□ 1.23
DNMT1-212ENST00000587197 NFATC2IPQ8NCF5 419 aa22.75■■□□□ 1.23
DNMT1-212ENST00000587197 SCN11AQ9UI33 1791 aa22.74■■□□□ 1.23
DNMT1-212ENST00000587197 SSFA2P28290 1259 aa22.74■■□□□ 1.23
DNMT1-212ENST00000587197 RIPK4P57078 832 aa22.74■■□□□ 1.23
DNMT1-212ENST00000587197 LMOD3Q0VAK6 560 aa22.74■■□□□ 1.23
DNMT1-212ENST00000587197 MIER1Q8N108 512 aa22.74■■□□□ 1.23
DNMT1-212ENST00000587197 LINC00116Q8NCU8 138 aa22.74■■□□□ 1.23
DNMT1-212ENST00000587197 ITPK1Q13572 414 aa22.73■■□□□ 1.23
DNMT1-212ENST00000587197 COL24A1Q17RW2 1714 aa22.72■■□□□ 1.23
DNMT1-212ENST00000587197 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.72■■□□□ 1.23
DNMT1-212ENST00000587197 PHF14O94880 888 aa22.72■■□□□ 1.23
DNMT1-212ENST00000587197 TEFQ10587 303 aa22.72■■□□□ 1.23
DNMT1-212ENST00000587197 KLHL34Q8N239 644 aa22.72■■□□□ 1.23
DNMT1-212ENST00000587197 APAF1O14727 1248 aa22.71■■□□□ 1.23
DNMT1-212ENST00000587197 GNPATO15228 680 aa22.71■■□□□ 1.23
DNMT1-212ENST00000587197 NCBP3Q53F19 620 aaKnown RBP22.71■■□□□ 1.23
DNMT1-212ENST00000587197 MCM10Q7L590 875 aa22.71■■□□□ 1.23
DNMT1-212ENST00000587197 ZNF831Q5JPB2 1677 aa22.7■■□□□ 1.22
DNMT1-212ENST00000587197 DCTN1Q14203 1278 aa22.69■■□□□ 1.22
DNMT1-212ENST00000587197 RC3H1Q5TC82 1133 aaKnown RBP22.69■■□□□ 1.22
DNMT1-212ENST00000587197 MSL1Q68DK7 614 aa22.69■■□□□ 1.22
DNMT1-212ENST00000587197 FAM9BQ8IZU0 186 aa22.69■■□□□ 1.22
DNMT1-212ENST00000587197 RTCBQ9Y3I0 505 aaKnown RBP22.69■■□□□ 1.22
DNMT1-212ENST00000587197 PTCD1O75127 700 aaKnown RBP22.68■■□□□ 1.22
DNMT1-212ENST00000587197 RRP7AQ9Y3A4 280 aaKnown RBP22.68■■□□□ 1.22
DNMT1-212ENST00000587197 UBR3Q6ZT12 1888 aa22.68■■□□□ 1.22
DNMT1-212ENST00000587197 TRIM35Q9UPQ4 493 aa22.67■■□□□ 1.22
DNMT1-212ENST00000587197 CNTNAP4Q9C0A0 1308 aa22.66■■□□□ 1.22
DNMT1-212ENST00000587197 TAF7Q15545 349 aaPredicted RBP22.66■■□□□ 1.22
DNMT1-212ENST00000587197 NEUROD2Q15784 382 aa22.66■■□□□ 1.22
DNMT1-212ENST00000587197 TRAPPC3LQ5T215 181 aa22.66■■□□□ 1.22
DNMT1-212ENST00000587197 SLC4A9Q96Q91 983 aa22.66■■□□□ 1.22
DNMT1-212ENST00000587197 ADRA2BP18089 450 aa22.65■■□□□ 1.22
DNMT1-212ENST00000587197 AMIGO3Q86WK7 504 aa22.64■■□□□ 1.21
DNMT1-212ENST00000587197 NGEFQ8N5V2 710 aa22.64■■□□□ 1.21
DNMT1-212ENST00000587197 DLG5Q8TDM6 1919 aa22.64■■□□□ 1.21
DNMT1-212ENST00000587197 BTBD11A6QL63 1104 aa22.63■■□□□ 1.21
DNMT1-212ENST00000587197 RPS6KA4O75676 772 aa22.63■■□□□ 1.21
DNMT1-212ENST00000587197 YY1P25490 414 aa22.63■■□□□ 1.21
DNMT1-212ENST00000587197 CCDC27Q2M243 656 aa22.63■■□□□ 1.21
DNMT1-212ENST00000587197 ZNF790Q6PG37 636 aa22.63■■□□□ 1.21
DNMT1-212ENST00000587197 BABAM1Q9NWV8 329 aa22.63■■□□□ 1.21
DNMT1-212ENST00000587197 SLC39A6Q13433 755 aa22.62■■□□□ 1.21
DNMT1-212ENST00000587197 GPR162Q16538 588 aa22.62■■□□□ 1.21
DNMT1-212ENST00000587197 SMIM5Q71RC9 77 aa22.62■■□□□ 1.21
DNMT1-212ENST00000587197 THUMPD2Q9BTF0 503 aaKnown RBP22.62■■□□□ 1.21
DNMT1-212ENST00000587197 VIRMAQ69YN4 1812 aaKnown RBP22.61■■□□□ 1.21
DNMT1-212ENST00000587197 TTC5Q8N0Z6 440 aa22.61■■□□□ 1.21
DNMT1-212ENST00000587197 SIPA1L3O60292 1781 aaPredicted RBP22.61■■□□□ 1.21
DNMT1-212ENST00000587197 RFC4P35249 363 aa22.6■■□□□ 1.21
DNMT1-212ENST00000587197 VSIG10Q8N0Z9 540 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms