RNA–Protein interactions for RNA: ENST00000587147.1

VAT1-204, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-204ENST00000587147 ATG3Q9NT62 314 aa22.42■■□□□ 1.18
VAT1-204ENST00000587147 TAF1LQ8IZX4 1826 aa22.42■■□□□ 1.18
VAT1-204ENST00000587147 MAPK8IP3Q9UPT6 1336 aa22.41■■□□□ 1.18
VAT1-204ENST00000587147 SLC15A2Q16348 729 aa22.41■■□□□ 1.18
VAT1-204ENST00000587147 NFATC2IPQ8NCF5 419 aa22.41■■□□□ 1.18
VAT1-204ENST00000587147 SIPA1L3O60292 1781 aaPredicted RBP22.4■■□□□ 1.18
VAT1-204ENST00000587147 R3HDM1Q15032 1099 aaKnown RBP22.4■■□□□ 1.18
VAT1-204ENST00000587147 LGR6Q9HBX8 967 aa22.4■■□□□ 1.18
VAT1-204ENST00000587147 ANO8Q9HCE9 1232 aaPredicted RBP22.4■■□□□ 1.18
VAT1-204ENST00000587147 ASAP1Q9ULH1 1129 aa22.4■■□□□ 1.18
VAT1-204ENST00000587147 LOC102724428A0A0B4J2F2 783 aa22.39■■□□□ 1.17
VAT1-204ENST00000587147 SIK1P57059 783 aa22.39■■□□□ 1.17
VAT1-204ENST00000587147 IL17REQ8NFR9 667 aa22.38■■□□□ 1.17
VAT1-204ENST00000587147 RTF1Q92541 710 aaKnown RBP22.38■■□□□ 1.17
VAT1-204ENST00000587147 AKT1S1Q96B36 256 aa22.38■■□□□ 1.17
VAT1-204ENST00000587147 TEFQ10587 303 aa22.37■■□□□ 1.17
VAT1-204ENST00000587147 NFE2L2Q16236 605 aa22.37■■□□□ 1.17
VAT1-204ENST00000587147 CASZ1Q86V15 1759 aa22.37■■□□□ 1.17
VAT1-204ENST00000587147 DLG5Q8TDM6 1919 aa22.37■■□□□ 1.17
VAT1-204ENST00000587147 UBR2Q8IWV8 1755 aa22.35■■□□□ 1.17
VAT1-204ENST00000587147 LRP5O75197 1615 aa22.35■■□□□ 1.17
VAT1-204ENST00000587147 C4BP0C0L5 1744 aa22.35■■□□□ 1.17
VAT1-204ENST00000587147 PSDA5PKW4 1024 aaPredicted RBP22.35■■□□□ 1.17
VAT1-204ENST00000587147 RUNDC1Q96C34 613 aa22.34■■□□□ 1.17
VAT1-204ENST00000587147 ADAMTS8Q9UP79 889 aa22.34■■□□□ 1.17
VAT1-204ENST00000587147 COL5A3P25940 1745 aaPredicted RBP22.33■■□□□ 1.17
VAT1-204ENST00000587147 ATP6V1AP38606 617 aa22.32■■□□□ 1.16
VAT1-204ENST00000587147 LMOD3Q0VAK6 560 aa22.32■■□□□ 1.16
VAT1-204ENST00000587147 ZNF827Q17R98 1081 aa22.32■■□□□ 1.16
VAT1-204ENST00000587147 VSIG10Q8N0Z9 540 aa22.31■■□□□ 1.16
VAT1-204ENST00000587147 FLAD1Q8NFF5 587 aa22.31■■□□□ 1.16
VAT1-204ENST00000587147 TUBGCP6Q96RT7 1819 aa22.31■■□□□ 1.16
VAT1-204ENST00000587147 KCPQ6ZWJ8 1503 aa22.31■■□□□ 1.16
VAT1-204ENST00000587147 TMPOP42166 694 aaKnown RBP22.29■■□□□ 1.16
VAT1-204ENST00000587147 KCNQ4P56696 695 aa22.29■■□□□ 1.16
VAT1-204ENST00000587147 RC3H1Q5TC82 1133 aaKnown RBP22.29■■□□□ 1.16
VAT1-204ENST00000587147 TTC5Q8N0Z6 440 aa22.29■■□□□ 1.16
VAT1-204ENST00000587147 SLC16A10Q8TF71 515 aa22.29■■□□□ 1.16
VAT1-204ENST00000587147 RBM42Q9BTD8 480 aaKnown RBP22.29■■□□□ 1.16
VAT1-204ENST00000587147 TFCP2L1Q9NZI6 479 aa22.29■■□□□ 1.16
VAT1-204ENST00000587147 TJP1Q07157 1748 aa22.28■■□□□ 1.16
VAT1-204ENST00000587147 ITPK1Q13572 414 aa22.28■■□□□ 1.16
VAT1-204ENST00000587147 ZNF790Q6PG37 636 aa22.28■■□□□ 1.16
VAT1-204ENST00000587147 SLC4A9Q96Q91 983 aa22.28■■□□□ 1.16
VAT1-204ENST00000587147 MRS2Q9HD23 443 aa22.28■■□□□ 1.16
VAT1-204ENST00000587147 UBR3Q6ZT12 1888 aa22.28■■□□□ 1.16
VAT1-204ENST00000587147 CNTNAP4Q9C0A0 1308 aa22.28■■□□□ 1.16
VAT1-204ENST00000587147 MCM10Q7L590 875 aa22.27■■□□□ 1.16
VAT1-204ENST00000587147 PNISRQ8TF01 805 aaKnown RBP22.27■■□□□ 1.16
VAT1-204ENST00000587147 AK7Q96M32 723 aa22.27■■□□□ 1.16
VAT1-204ENST00000587147 BTBD11A6QL63 1104 aa22.26■■□□□ 1.15
VAT1-204ENST00000587147 PTCD1O75127 700 aaKnown RBP22.26■■□□□ 1.15
VAT1-204ENST00000587147 RIPK4P57078 832 aa22.26■■□□□ 1.15
VAT1-204ENST00000587147 TAF7Q15545 349 aaPredicted RBP22.26■■□□□ 1.15
VAT1-204ENST00000587147 LINC00116Q8NCU8 138 aa22.26■■□□□ 1.15
VAT1-204ENST00000587147 PNPLA7Q6ZV29 1317 aa22.26■■□□□ 1.15
VAT1-204ENST00000587147 SSFA2P28290 1259 aa22.25■■□□□ 1.15
VAT1-204ENST00000587147 TEX13AQ9BXU3 409 aaPredicted RBP22.25■■□□□ 1.15
VAT1-204ENST00000587147 BABAM1Q9NWV8 329 aa22.25■■□□□ 1.15
VAT1-204ENST00000587147 COL24A1Q17RW2 1714 aa22.24■■□□□ 1.15
VAT1-204ENST00000587147 SLC39A6Q13433 755 aa22.24■■□□□ 1.15
VAT1-204ENST00000587147 MTFR1LQ9H019 292 aa22.24■■□□□ 1.15
VAT1-204ENST00000587147 SPON1Q9HCB6 807 aa22.24■■□□□ 1.15
VAT1-204ENST00000587147 CCDC184Q52MB2 194 aa22.23■■□□□ 1.15
VAT1-204ENST00000587147 NCBP3Q53F19 620 aaKnown RBP22.23■■□□□ 1.15
VAT1-204ENST00000587147 CCDC146Q8IYE0 955 aa22.23■■□□□ 1.15
VAT1-204ENST00000587147 FMNL2Q96PY5 1086 aa22.23■■□□□ 1.15
VAT1-204ENST00000587147 HEG1Q9ULI3 1381 aa22.23■■□□□ 1.15
VAT1-204ENST00000587147 KDM3BQ7LBC6 1761 aa22.22■■□□□ 1.15
VAT1-204ENST00000587147 ADRA2BP18089 450 aa22.22■■□□□ 1.15
VAT1-204ENST00000587147 DCTN1Q14203 1278 aa22.22■■□□□ 1.15
VAT1-204ENST00000587147 ZNF496Q96IT1 587 aaPredicted RBP22.2■■□□□ 1.14
VAT1-204ENST00000587147 MYH14Q7Z406 1995 aaKnown RBP22.19■■□□□ 1.14
VAT1-204ENST00000587147 RTCBQ9Y3I0 505 aaKnown RBP22.19■■□□□ 1.14
VAT1-204ENST00000587147 SRCAPQ6ZRS2 3230 aa22.19■■□□□ 1.14
VAT1-204ENST00000587147 GNPATO15228 680 aa22.18■■□□□ 1.14
VAT1-204ENST00000587147 RPS6KA4O75676 772 aa22.18■■□□□ 1.14
VAT1-204ENST00000587147 STARD3NLO95772 234 aa22.18■■□□□ 1.14
VAT1-204ENST00000587147 CRKLP46109 303 aaKnown RBP22.18■■□□□ 1.14
VAT1-204ENST00000587147 COL23A1Q86Y22 540 aaPredicted RBP22.18■■□□□ 1.14
VAT1-204ENST00000587147 PDGFDQ9GZP0 370 aaPredicted RBP22.18■■□□□ 1.14
VAT1-204ENST00000587147 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.17■■□□□ 1.14
VAT1-204ENST00000587147 CYP19A1P11511 503 aaPredicted RBP22.17■■□□□ 1.14
VAT1-204ENST00000587147 DNAJC10Q8IXB1 793 aa22.17■■□□□ 1.14
VAT1-204ENST00000587147 TRIM35Q9UPQ4 493 aa22.17■■□□□ 1.14
VAT1-204ENST00000587147 CCER2I3L3R5 266 aa22.16■■□□□ 1.14
VAT1-204ENST00000587147 CALD1Q05682 793 aaKnown RBP22.16■■□□□ 1.14
VAT1-204ENST00000587147 CCDC87Q9NVE4 849 aa22.16■■□□□ 1.14
VAT1-204ENST00000587147 APAF1O14727 1248 aa22.15■■□□□ 1.14
VAT1-204ENST00000587147 CCDC27Q2M243 656 aa22.15■■□□□ 1.14
VAT1-204ENST00000587147 ZBTB7AO95365 584 aa22.14■■□□□ 1.13
VAT1-204ENST00000587147 SNRPA1P09661 255 aaKnown RBP22.14■■□□□ 1.13
VAT1-204ENST00000587147 NEUROD2Q15784 382 aa22.14■■□□□ 1.13
VAT1-204ENST00000587147 TRAPPC3LQ5T215 181 aa22.14■■□□□ 1.13
VAT1-204ENST00000587147 INTS5Q6P9B9 1019 aaKnown RBP22.14■■□□□ 1.13
VAT1-204ENST00000587147 NGEFQ8N5V2 710 aa22.14■■□□□ 1.13
VAT1-204ENST00000587147 SGIP1Q9BQI5 828 aa22.14■■□□□ 1.13
VAT1-204ENST00000587147 RRP7AQ9Y3A4 280 aaKnown RBP22.14■■□□□ 1.13
VAT1-204ENST00000587147 LAMB4A4D0S4 1761 aa22.13■■□□□ 1.13
VAT1-204ENST00000587147 PTGER2P43116 358 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms