RNA–Protein interactions for RNA: ENST00000585855.2

TCF3-206, Transcript of transcription factor 3, humanhuman

TSL 3

Gene TCF3, Length 1,170 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-206ENST00000585855 IL16Q14005 1332 aa26.03■■□□□ 1.76
TCF3-206ENST00000585855 PRIM1P49642 420 aaKnown RBP26.02■■□□□ 1.76
TCF3-206ENST00000585855 TAF7Q15545 349 aaPredicted RBP26.01■■□□□ 1.75
TCF3-206ENST00000585855 NFATC2IPQ8NCF5 419 aa26.01■■□□□ 1.75
TCF3-206ENST00000585855 GOLGA2Q08379 1002 aa25.99■■□□□ 1.75
TCF3-206ENST00000585855 IFT57Q9NWB7 429 aa25.99■■□□□ 1.75
TCF3-206ENST00000585855 GNAI1P63096 354 aa25.98■■□□□ 1.75
TCF3-206ENST00000585855 BABAM1Q9NWV8 329 aa25.98■■□□□ 1.75
TCF3-206ENST00000585855 PIGBQ92521 554 aa25.97■■□□□ 1.75
TCF3-206ENST00000585855 CFAP44Q96MT7 982 aa25.97■■□□□ 1.75
TCF3-206ENST00000585855 LAS1LQ9Y4W2 734 aaKnown RBP25.97■■□□□ 1.75
TCF3-206ENST00000585855 BTAF1O14981 1849 aa25.96■■□□□ 1.75
TCF3-206ENST00000585855 BTBD11A6QL63 1104 aa25.96■■□□□ 1.75
TCF3-206ENST00000585855 KCNQ2O43526 872 aa25.96■■□□□ 1.75
TCF3-206ENST00000585855 BCL11BQ9C0K0 894 aaPredicted RBP25.96■■□□□ 1.75
TCF3-206ENST00000585855 TSPYL4Q9UJ04 414 aa25.95■■□□□ 1.74
TCF3-206ENST00000585855 PAPPAQ13219 1627 aa25.95■■□□□ 1.74
TCF3-206ENST00000585855 KDM3BQ7LBC6 1761 aa25.95■■□□□ 1.74
TCF3-206ENST00000585855 CHL1O00533 1208 aa25.94■■□□□ 1.74
TCF3-206ENST00000585855 ZNF853P0CG23 659 aa25.94■■□□□ 1.74
TCF3-206ENST00000585855 MYH16Q9H6N6 1097 aa25.94■■□□□ 1.74
TCF3-206ENST00000585855 E9PSI1 815 aa25.93■■□□□ 1.74
TCF3-206ENST00000585855 TRIM37O94972 964 aa25.93■■□□□ 1.74
TCF3-206ENST00000585855 TTC5Q8N0Z6 440 aa25.91■■□□□ 1.74
TCF3-206ENST00000585855 MIS18AQ9NYP9 233 aa25.91■■□□□ 1.74
TCF3-206ENST00000585855 ZNF790Q6PG37 636 aa25.9■■□□□ 1.74
TCF3-206ENST00000585855 SMARCC1Q92922 1105 aaPredicted RBP25.9■■□□□ 1.74
TCF3-206ENST00000585855 MBIPQ9NS73 344 aa25.9■■□□□ 1.74
TCF3-206ENST00000585855 UBR2Q8IWV8 1755 aa25.9■■□□□ 1.74
TCF3-206ENST00000585855 TNS1Q9HBL0 1735 aaKnown RBP25.89■■□□□ 1.74
TCF3-206ENST00000585855 SLFN5Q08AF3 891 aa25.89■■□□□ 1.74
TCF3-206ENST00000585855 SLC39A6Q13433 755 aa25.89■■□□□ 1.74
TCF3-206ENST00000585855 PTF1AQ7RTS3 328 aa25.89■■□□□ 1.74
TCF3-206ENST00000585855 CDCA7LQ96GN5 454 aa25.89■■□□□ 1.74
TCF3-206ENST00000585855 SPINK5Q9NQ38 1064 aaPredicted RBP25.89■■□□□ 1.74
TCF3-206ENST00000585855 ASAP1Q9ULH1 1129 aa25.89■■□□□ 1.74
TCF3-206ENST00000585855 ATG3Q9NT62 314 aa25.88■■□□□ 1.73
TCF3-206ENST00000585855 FANCIQ9NVI1 1328 aa25.88■■□□□ 1.73
TCF3-206ENST00000585855 TSR2Q969E8 191 aaKnown RBP25.87■■□□□ 1.73
TCF3-206ENST00000585855 PALLDQ8WX93 1383 aa25.86■■□□□ 1.73
TCF3-206ENST00000585855 KCPQ6ZWJ8 1503 aa25.84■■□□□ 1.73
TCF3-206ENST00000585855 SOCS7O14512 581 aa25.84■■□□□ 1.73
TCF3-206ENST00000585855 KCNQ3O43525 872 aa25.84■■□□□ 1.73
TCF3-206ENST00000585855 FMNL2Q96PY5 1086 aa25.84■■□□□ 1.73
TCF3-206ENST00000585855 TRMT2AQ8IZ69 625 aaKnown RBP25.83■■□□□ 1.73
TCF3-206ENST00000585855 PTCD1O75127 700 aaKnown RBP25.82■■□□□ 1.72
TCF3-206ENST00000585855 EIF4A1P60842 406 aaKnown RBP25.82■■□□□ 1.72
TCF3-206ENST00000585855 SF3B2Q13435 895 aaKnown RBP25.82■■□□□ 1.72
TCF3-206ENST00000585855 ZNF496Q96IT1 587 aaPredicted RBP25.82■■□□□ 1.72
TCF3-206ENST00000585855 LY75O60449 1722 aa25.81■■□□□ 1.72
TCF3-206ENST00000585855 APBA3O96018 575 aa25.81■■□□□ 1.72
TCF3-206ENST00000585855 DUSP27Q5VZP5 1158 aa25.81■■□□□ 1.72
TCF3-206ENST00000585855 CCDC125Q86Z20 511 aa25.81■■□□□ 1.72
TCF3-206ENST00000585855 RBM42Q9BTD8 480 aaKnown RBP25.81■■□□□ 1.72
TCF3-206ENST00000585855 EP400Q96L91 3159 aa25.81■■□□□ 1.72
TCF3-206ENST00000585855 RGPD3A6NKT7 1758 aaPredicted RBP25.8■■□□□ 1.72
TCF3-206ENST00000585855 RGPD4Q7Z3J3 1758 aa25.8■■□□□ 1.72
TCF3-206ENST00000585855 HEG1Q9ULI3 1381 aa25.8■■□□□ 1.72
TCF3-206ENST00000585855 ZNF831Q5JPB2 1677 aa25.79■■□□□ 1.72
TCF3-206ENST00000585855 LOC102724428A0A0B4J2F2 783 aa25.78■■□□□ 1.72
TCF3-206ENST00000585855 PLSCR1O15162 318 aa25.78■■□□□ 1.72
TCF3-206ENST00000585855 SIK1P57059 783 aa25.78■■□□□ 1.72
TCF3-206ENST00000585855 VSIG10Q8N0Z9 540 aa25.78■■□□□ 1.72
TCF3-206ENST00000585855 EXOSC9Q06265 439 aaKnown RBP25.77■■□□□ 1.72
TCF3-206ENST00000585855 CICQ96RK0 1608 aaPredicted RBP25.77■■□□□ 1.72
TCF3-206ENST00000585855 SNRPA1P09661 255 aaKnown RBP25.76■■□□□ 1.71
TCF3-206ENST00000585855 SOS1Q07889 1333 aaPredicted RBP25.76■■□□□ 1.71
TCF3-206ENST00000585855 LAMB4A4D0S4 1761 aa25.75■■□□□ 1.71
TCF3-206ENST00000585855 C5P01031 1676 aa25.75■■□□□ 1.71
TCF3-206ENST00000585855 GIGYF1O75420 1035 aaPredicted RBP25.75■■□□□ 1.71
TCF3-206ENST00000585855 HOXB7P09629 217 aa25.75■■□□□ 1.71
TCF3-206ENST00000585855 BAG6P46379 1132 aa25.75■■□□□ 1.71
TCF3-206ENST00000585855 KRT24Q2M2I5 525 aa25.75■■□□□ 1.71
TCF3-206ENST00000585855 C8orf58Q8NAV2 365 aa25.74■■□□□ 1.71
TCF3-206ENST00000585855 CCNL1Q9UK58 526 aaPredicted RBP25.74■■□□□ 1.71
TCF3-206ENST00000585855 TJP1Q07157 1748 aa25.74■■□□□ 1.71
TCF3-206ENST00000585855 ATP6V1AP38606 617 aa25.73■■□□□ 1.71
TCF3-206ENST00000585855 TWISTNBQ3B726 338 aaPredicted RBP25.73■■□□□ 1.71
TCF3-206ENST00000585855 SLC27A3Q5K4L6 730 aa25.73■■□□□ 1.71
TCF3-206ENST00000585855 TEX13AQ9BXU3 409 aaPredicted RBP25.73■■□□□ 1.71
TCF3-206ENST00000585855 SLC4A9Q96Q91 983 aa25.72■■□□□ 1.71
TCF3-206ENST00000585855 ELL2O00472 640 aaPredicted RBP25.71■■□□□ 1.71
TCF3-206ENST00000585855 CT47B1P0C2W7 299 aaPredicted RBP25.71■■□□□ 1.71
TCF3-206ENST00000585855 HMGB2P26583 209 aaKnown RBP25.71■■□□□ 1.71
TCF3-206ENST00000585855 CHMP4AQ9BY43 222 aa25.71■■□□□ 1.71
TCF3-206ENST00000585855 TXNRD1Q16881 649 aa25.7■■□□□ 1.7
TCF3-206ENST00000585855 TSPYL6Q8N831 410 aa25.7■■□□□ 1.7
TCF3-206ENST00000585855 UPF1Q92900 1129 aaKnown RBP eCLIP25.7■■□□□ 1.7
TCF3-206ENST00000585855 DNAJC10Q8IXB1 793 aa25.69■■□□□ 1.7
TCF3-206ENST00000585855 COL5A3P25940 1745 aaPredicted RBP25.68■■□□□ 1.7
TCF3-206ENST00000585855 TAF1LQ8IZX4 1826 aa25.68■■□□□ 1.7
TCF3-206ENST00000585855 STARD3NLO95772 234 aa25.68■■□□□ 1.7
TCF3-206ENST00000585855 EN1Q05925 392 aaPredicted RBP25.68■■□□□ 1.7
TCF3-206ENST00000585855 ITPK1Q13572 414 aa25.68■■□□□ 1.7
TCF3-206ENST00000585855 PRAMEF22A3QJZ6 481 aa25.67■■□□□ 1.7
TCF3-206ENST00000585855 VAMP4O75379 141 aa25.67■■□□□ 1.7
TCF3-206ENST00000585855 CAMKK2Q96RR4 588 aa25.67■■□□□ 1.7
TCF3-206ENST00000585855 HDGFL1Q5TGJ6 251 aa25.66■■□□□ 1.7
TCF3-206ENST00000585855 ZNF428Q96B54 188 aa25.66■■□□□ 1.7
TCF3-206ENST00000585855 USP16Q9Y5T5 823 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms