RNA–Protein interactions for RNA: ENST00000584054.5

EIF4A1-231, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 2

Gene EIF4A1, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-231	ENST00000584054	CHL1	O00533	1208 aa		13.11	□□□□□ -0.31
EIF4A1-231	ENST00000584054	MCM10	Q7L590	875 aa		13.11	□□□□□ -0.31
EIF4A1-231	ENST00000584054	TRMT2A	Q8IZ69	625 aa	Known RBP	13.11	□□□□□ -0.31
EIF4A1-231	ENST00000584054	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.11	□□□□□ -0.31
EIF4A1-231	ENST00000584054	HEG1	Q9ULI3	1381 aa		13.1	□□□□□ -0.31
EIF4A1-231	ENST00000584054	PRIM1	P49642	420 aa	Known RBP	13.1	□□□□□ -0.31
EIF4A1-231	ENST00000584054	DCTN1	Q14203	1278 aa		13.1	□□□□□ -0.31
EIF4A1-231	ENST00000584054	PIGB	Q92521	554 aa		13.1	□□□□□ -0.31
EIF4A1-231	ENST00000584054	RTF1	Q92541	710 aa	Known RBP	13.1	□□□□□ -0.31
EIF4A1-231	ENST00000584054	ITGB4	P16144	1822 aa		13.09	□□□□□ -0.31
EIF4A1-231	ENST00000584054	KCNQ2	O43526	872 aa		13.09	□□□□□ -0.31
EIF4A1-231	ENST00000584054	TAF7	Q15545	349 aa	Predicted RBP	13.09	□□□□□ -0.31
EIF4A1-231	ENST00000584054	FAM182B	Q5T319	152 aa		13.09	□□□□□ -0.31
EIF4A1-231	ENST00000584054	PTF1A	Q7RTS3	328 aa		13.09	□□□□□ -0.31
EIF4A1-231	ENST00000584054	NFATC2IP	Q8NCF5	419 aa		13.09	□□□□□ -0.31
EIF4A1-231	ENST00000584054	DOT1L	Q8TEK3	1739 aa		13.09	□□□□□ -0.31
EIF4A1-231	ENST00000584054	CFAP44	Q96MT7	982 aa		13.09	□□□□□ -0.31
EIF4A1-231	ENST00000584054	PAPPA	Q13219	1627 aa		13.09	□□□□□ -0.31
EIF4A1-231	ENST00000584054	ZBED9	Q6R2W3	1325 aa		13.09	□□□□□ -0.31
EIF4A1-231	ENST00000584054	VIRMA	Q69YN4	1812 aa	Known RBP	13.09	□□□□□ -0.31
EIF4A1-231	ENST00000584054		A0A0G2JS52	829 aa		13.08	□□□□□ -0.32
EIF4A1-231	ENST00000584054	MYT1	Q01538	1121 aa		13.08	□□□□□ -0.32
EIF4A1-231	ENST00000584054	CALD1	Q05682	793 aa	Known RBP	13.08	□□□□□ -0.32
EIF4A1-231	ENST00000584054	NEUROD2	Q15784	382 aa		13.08	□□□□□ -0.32
EIF4A1-231	ENST00000584054	THUMPD2	Q9BTF0	503 aa	Known RBP	13.08	□□□□□ -0.32
EIF4A1-231	ENST00000584054	IFT57	Q9NWB7	429 aa		13.08	□□□□□ -0.32
EIF4A1-231	ENST00000584054	PLSCR1	O15162	318 aa		13.07	□□□□□ -0.32
EIF4A1-231	ENST00000584054	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.07	□□□□□ -0.32
EIF4A1-231	ENST00000584054	ATG3	Q9NT62	314 aa		13.07	□□□□□ -0.32
EIF4A1-231	ENST00000584054	ZNF831	Q5JPB2	1677 aa		13.07	□□□□□ -0.32
EIF4A1-231	ENST00000584054	CIC	Q96RK0	1608 aa	Predicted RBP	13.06	□□□□□ -0.32
EIF4A1-231	ENST00000584054	CABP4	P57796	275 aa		13.06	□□□□□ -0.32
EIF4A1-231	ENST00000584054	CCDC125	Q86Z20	511 aa		13.06	□□□□□ -0.32
EIF4A1-231	ENST00000584054	KDM3B	Q7LBC6	1761 aa		13.06	□□□□□ -0.32
EIF4A1-231	ENST00000584054	TNS1	Q9HBL0	1735 aa	Known RBP	13.05	□□□□□ -0.32
EIF4A1-231	ENST00000584054	UBR2	Q8IWV8	1755 aa		13.05	□□□□□ -0.32
EIF4A1-231	ENST00000584054	KCP	Q6ZWJ8	1503 aa		13.05	□□□□□ -0.32
EIF4A1-231	ENST00000584054	SLFN5	Q08AF3	891 aa		13.05	□□□□□ -0.32
EIF4A1-231	ENST00000584054	TEF	Q10587	303 aa		13.05	□□□□□ -0.32
EIF4A1-231	ENST00000584054	ZNF790	Q6PG37	636 aa		13.05	□□□□□ -0.32
EIF4A1-231	ENST00000584054	ACSBG1	Q96GR2	724 aa		13.05	□□□□□ -0.32
EIF4A1-231	ENST00000584054	TMOD3	Q9NYL9	352 aa		13.05	□□□□□ -0.32
EIF4A1-231	ENST00000584054	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.04	□□□□□ -0.32
EIF4A1-231	ENST00000584054	RGPD4	Q7Z3J3	1758 aa		13.04	□□□□□ -0.32
EIF4A1-231	ENST00000584054	GNAI1	P63096	354 aa		13.04	□□□□□ -0.32
EIF4A1-231	ENST00000584054	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.04	□□□□□ -0.32
EIF4A1-231	ENST00000584054	VSIG10	Q8N0Z9	540 aa		13.04	□□□□□ -0.32
EIF4A1-231	ENST00000584054	ASAP1	Q9ULH1	1129 aa		13.04	□□□□□ -0.32
EIF4A1-231	ENST00000584054	BTAF1	O14981	1849 aa		13.04	□□□□□ -0.32
EIF4A1-231	ENST00000584054	LY75	O60449	1722 aa		13.03	□□□□□ -0.32
EIF4A1-231	ENST00000584054	BTBD11	A6QL63	1104 aa		13.03	□□□□□ -0.32
EIF4A1-231	ENST00000584054	TRIM37	O94972	964 aa		13.03	□□□□□ -0.32
EIF4A1-231	ENST00000584054	EIF4A1	P60842	406 aa	Known RBP	13.03	□□□□□ -0.32
EIF4A1-231	ENST00000584054	GOLGA2	Q08379	1002 aa		13.03	□□□□□ -0.32
EIF4A1-231	ENST00000584054	PROM2	Q8N271	834 aa		13.03	□□□□□ -0.32
EIF4A1-231	ENST00000584054	SMARCC1	Q92922	1105 aa	Predicted RBP	13.03	□□□□□ -0.32
EIF4A1-231	ENST00000584054	SLC4A9	Q96Q91	983 aa		13.03	□□□□□ -0.32
EIF4A1-231	ENST00000584054		E9PSI1	815 aa		13.02	□□□□□ -0.33
EIF4A1-231	ENST00000584054	KCNQ3	O43525	872 aa		13.02	□□□□□ -0.33
EIF4A1-231	ENST00000584054	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.02	□□□□□ -0.33
EIF4A1-231	ENST00000584054	MBIP	Q9NS73	344 aa		13.02	□□□□□ -0.33
EIF4A1-231	ENST00000584054	DUSP27	Q5VZP5	1158 aa		13.01	□□□□□ -0.33
EIF4A1-231	ENST00000584054	CAMKK2	Q96RR4	588 aa		13.01	□□□□□ -0.33
EIF4A1-231	ENST00000584054	SOS1	Q07889	1333 aa	Predicted RBP	13.01	□□□□□ -0.33
EIF4A1-231	ENST00000584054	PALLD	Q8WX93	1383 aa		13	□□□□□ -0.33
EIF4A1-231	ENST00000584054	FANCI	Q9NVI1	1328 aa		13	□□□□□ -0.33
EIF4A1-231	ENST00000584054	SENP3-EIF4A1	A0A087X0R7	540 aa		13	□□□□□ -0.33
EIF4A1-231	ENST00000584054	HOXB7	P09629	217 aa		13	□□□□□ -0.33
EIF4A1-231	ENST00000584054	SLC39A6	Q13433	755 aa		13	□□□□□ -0.33
EIF4A1-231	ENST00000584054	CDCA7L	Q96GN5	454 aa		13	□□□□□ -0.33
EIF4A1-231	ENST00000584054	ZNF496	Q96IT1	587 aa	Predicted RBP	13	□□□□□ -0.33
EIF4A1-231	ENST00000584054	MIS18A	Q9NYP9	233 aa		13	□□□□□ -0.33
EIF4A1-231	ENST00000584054	FBXO3	Q9UK99	471 aa		13	□□□□□ -0.33
EIF4A1-231	ENST00000584054	ATF5	Q9Y2D1	282 aa	Predicted RBP	13	□□□□□ -0.33
EIF4A1-231	ENST00000584054	SALL2	Q9Y467	1007 aa	Predicted RBP	13	□□□□□ -0.33
EIF4A1-231	ENST00000584054	GIGYF1	O75420	1035 aa	Predicted RBP	12.99	□□□□□ -0.33
EIF4A1-231	ENST00000584054	TSPYL4	Q9UJ04	414 aa		12.99	□□□□□ -0.33
EIF4A1-231	ENST00000584054	LOC102724428	A0A0B4J2F2	783 aa		12.98	□□□□□ -0.33
EIF4A1-231	ENST00000584054	SIK1	P57059	783 aa		12.98	□□□□□ -0.33
EIF4A1-231	ENST00000584054	SLC27A3	Q5K4L6	730 aa		12.98	□□□□□ -0.33
EIF4A1-231	ENST00000584054	SYTL4	Q96C24	671 aa	Predicted RBP	12.98	□□□□□ -0.33
EIF4A1-231	ENST00000584054	FMNL2	Q96PY5	1086 aa		12.98	□□□□□ -0.33
EIF4A1-231	ENST00000584054	MYH16	Q9H6N6	1097 aa		12.98	□□□□□ -0.33
EIF4A1-231	ENST00000584054	APBA3	O96018	575 aa		12.97	□□□□□ -0.33
EIF4A1-231	ENST00000584054	C8orf58	Q8NAV2	365 aa		12.97	□□□□□ -0.33
EIF4A1-231	ENST00000584054	LRRC4B	Q9NT99	713 aa		12.97	□□□□□ -0.33
EIF4A1-231	ENST00000584054	TJP1	Q07157	1748 aa		12.96	□□□□□ -0.33
EIF4A1-231	ENST00000584054	VAMP4	O75379	141 aa		12.96	□□□□□ -0.33
EIF4A1-231	ENST00000584054	SNRPA1	P09661	255 aa	Known RBP	12.96	□□□□□ -0.33
EIF4A1-231	ENST00000584054	CT47B1	P0C2W7	299 aa	Predicted RBP	12.96	□□□□□ -0.33
EIF4A1-231	ENST00000584054	ITPK1	Q13572	414 aa		12.96	□□□□□ -0.33
EIF4A1-231	ENST00000584054	TXNRD1	Q16881	649 aa		12.96	□□□□□ -0.33
EIF4A1-231	ENST00000584054	TSR2	Q969E8	191 aa	Known RBP	12.96	□□□□□ -0.33
EIF4A1-231	ENST00000584054	TEX13A	Q9BXU3	409 aa	Predicted RBP	12.96	□□□□□ -0.33
EIF4A1-231	ENST00000584054	C5	P01031	1676 aa		12.96	□□□□□ -0.34
EIF4A1-231	ENST00000584054	RREB1	Q92766	1687 aa		12.96	□□□□□ -0.34
EIF4A1-231	ENST00000584054	HMGB2	P26583	209 aa	Known RBP	12.95	□□□□□ -0.34
EIF4A1-231	ENST00000584054	RC3H1	Q5TC82	1133 aa	Known RBP	12.95	□□□□□ -0.34
EIF4A1-231	ENST00000584054	TTC5	Q8N0Z6	440 aa		12.95	□□□□□ -0.34
EIF4A1-231	ENST00000584054	COL5A3	P25940	1745 aa	Predicted RBP	12.94	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms