RNA–Protein interactions for RNA: ENST00000583070.5

NUP85-220, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-220ENST00000583070 TMOD3Q9NYL9 352 aa14.19□□□□□ -0.14
NUP85-220ENST00000583070 C5P01031 1676 aa14.18□□□□□ -0.14
NUP85-220ENST00000583070 TMPOP42166 694 aaKnown RBP14.18□□□□□ -0.14
NUP85-220ENST00000583070 CABP4P57796 275 aa14.18□□□□□ -0.14
NUP85-220ENST00000583070 CAMKK2Q96RR4 588 aa14.18□□□□□ -0.14
NUP85-220ENST00000583070 RTF1Q92541 710 aaKnown RBP14.17□□□□□ -0.14
NUP85-220ENST00000583070 COL5A3P25940 1745 aaPredicted RBP14.17□□□□□ -0.14
NUP85-220ENST00000583070 RIPK4P57078 832 aa14.16□□□□□ -0.14
NUP85-220ENST00000583070 LMOD3Q0VAK6 560 aa14.16□□□□□ -0.14
NUP85-220ENST00000583070 DEFB132Q7Z7B7 95 aa14.16□□□□□ -0.14
NUP85-220ENST00000583070 FAM9BQ8IZU0 186 aa14.16□□□□□ -0.14
NUP85-220ENST00000583070 NFATC2IPQ8NCF5 419 aa14.16□□□□□ -0.14
NUP85-220ENST00000583070 TJP1Q07157 1748 aa14.15□□□□□ -0.14
NUP85-220ENST00000583070 PALLDQ8WX93 1383 aa14.15□□□□□ -0.14
NUP85-220ENST00000583070 APAF1O14727 1248 aa14.15□□□□□ -0.14
NUP85-220ENST00000583070 EN1Q05925 392 aaPredicted RBP14.15□□□□□ -0.14
NUP85-220ENST00000583070 TEFQ10587 303 aa14.15□□□□□ -0.14
NUP85-220ENST00000583070 NCBP3Q53F19 620 aaKnown RBP14.15□□□□□ -0.14
NUP85-220ENST00000583070 MCM10Q7L590 875 aa14.15□□□□□ -0.14
NUP85-220ENST00000583070 SMARCC1Q92922 1105 aaPredicted RBP14.15□□□□□ -0.14
NUP85-220ENST00000583070 KCPQ6ZWJ8 1503 aa14.15□□□□□ -0.14
NUP85-220ENST00000583070 TRIM35Q9UPQ4 493 aa14.14□□□□□ -0.15
NUP85-220ENST00000583070 RRP7AQ9Y3A4 280 aaKnown RBP14.14□□□□□ -0.15
NUP85-220ENST00000583070 QSER1Q2KHR3 1735 aa14.14□□□□□ -0.15
NUP85-220ENST00000583070 TUBGCP6Q96RT7 1819 aa14.13□□□□□ -0.15
NUP85-220ENST00000583070 DCTN1Q14203 1278 aa14.13□□□□□ -0.15
NUP85-220ENST00000583070 EZH2Q15910 746 aaKnown RBP14.13□□□□□ -0.15
NUP85-220ENST00000583070 PROM2Q8N271 834 aa14.13□□□□□ -0.15
NUP85-220ENST00000583070 ATG3Q9NT62 314 aa14.13□□□□□ -0.15
NUP85-220ENST00000583070 ASAP1Q9ULH1 1129 aa14.13□□□□□ -0.15
NUP85-220ENST00000583070 NEUROD2Q15784 382 aa14.12□□□□□ -0.15
NUP85-220ENST00000583070 TXNRD1Q16881 649 aa14.12□□□□□ -0.15
NUP85-220ENST00000583070 CCDC27Q2M243 656 aa14.12□□□□□ -0.15
NUP85-220ENST00000583070 SLC27A3Q5K4L6 730 aa14.12□□□□□ -0.15
NUP85-220ENST00000583070 MYH14Q7Z406 1995 aaKnown RBP14.12□□□□□ -0.15
NUP85-220ENST00000583070 C4BP0C0L5 1744 aa14.11□□□□□ -0.15
NUP85-220ENST00000583070 UBR3Q6ZT12 1888 aa14.11□□□□□ -0.15
NUP85-220ENST00000583070 NGEFQ8N5V2 710 aa14.11□□□□□ -0.15
NUP85-220ENST00000583070 LAMB4A4D0S4 1761 aa14.11□□□□□ -0.15
NUP85-220ENST00000583070 TAF7Q15545 349 aaPredicted RBP14.1□□□□□ -0.15
NUP85-220ENST00000583070 THUMPD2Q9BTF0 503 aaKnown RBP14.1□□□□□ -0.15
NUP85-220ENST00000583070 LOC102724428A0A0B4J2F2 783 aa14.09□□□□□ -0.15
NUP85-220ENST00000583070 SIK1P57059 783 aa14.09□□□□□ -0.15
NUP85-220ENST00000583070 ZNF790Q6PG37 636 aa14.09□□□□□ -0.15
NUP85-220ENST00000583070 LRRC4BQ9NT99 713 aa14.09□□□□□ -0.15
NUP85-220ENST00000583070 BTBD11A6QL63 1104 aa14.08□□□□□ -0.16
NUP85-220ENST00000583070 HMGB2P26583 209 aaKnown RBP14.08□□□□□ -0.16
NUP85-220ENST00000583070 BABAM1Q9NWV8 329 aa14.08□□□□□ -0.16
NUP85-220ENST00000583070 CCNL1Q9UK58 526 aaPredicted RBP14.08□□□□□ -0.16
NUP85-220ENST00000583070 CALD1Q05682 793 aaKnown RBP14.07□□□□□ -0.16
NUP85-220ENST00000583070 SLC39A6Q13433 755 aa14.07□□□□□ -0.16
NUP85-220ENST00000583070 WWC1Q8IX03 1113 aa14.07□□□□□ -0.16
NUP85-220ENST00000583070 TTC5Q8N0Z6 440 aa14.07□□□□□ -0.16
NUP85-220ENST00000583070 SLC4A9Q96Q91 983 aa14.07□□□□□ -0.16
NUP85-220ENST00000583070 PTCD1O75127 700 aaKnown RBP14.06□□□□□ -0.16
NUP85-220ENST00000583070 VSIG10Q8N0Z9 540 aa14.06□□□□□ -0.16
NUP85-220ENST00000583070 HEG1Q9ULI3 1381 aa14.06□□□□□ -0.16
NUP85-220ENST00000583070 CASZ1Q86V15 1759 aa14.05□□□□□ -0.16
NUP85-220ENST00000583070 CHL1O00533 1208 aa14.05□□□□□ -0.16
NUP85-220ENST00000583070 ATP6V1AP38606 617 aa14.05□□□□□ -0.16
NUP85-220ENST00000583070 ITPK1Q13572 414 aa14.05□□□□□ -0.16
NUP85-220ENST00000583070 ZNF496Q96IT1 587 aaPredicted RBP14.05□□□□□ -0.16
NUP85-220ENST00000583070 CFAP44Q96MT7 982 aa14.05□□□□□ -0.16
NUP85-220ENST00000583070 RBM42Q9BTD8 480 aaKnown RBP14.05□□□□□ -0.16
NUP85-220ENST00000583070 ZNF853P0CG23 659 aa14.04□□□□□ -0.16
NUP85-220ENST00000583070 KCNQ4P56696 695 aa14.04□□□□□ -0.16
NUP85-220ENST00000583070 FMNL2Q96PY5 1086 aa14.04□□□□□ -0.16
NUP85-220ENST00000583070 ANO8Q9HCE9 1232 aaPredicted RBP14.04□□□□□ -0.16
NUP85-220ENST00000583070 IFT57Q9NWB7 429 aa14.04□□□□□ -0.16
NUP85-220ENST00000583070 IL16Q14005 1332 aa14.04□□□□□ -0.16
NUP85-220ENST00000583070 ZNF521Q96K83 1311 aa14.04□□□□□ -0.16
NUP85-220ENST00000583070 KCNQ3O43525 872 aa14.03□□□□□ -0.16
NUP85-220ENST00000583070 AKT1S1Q96B36 256 aa14.03□□□□□ -0.16
NUP85-220ENST00000583070 MIS18AQ9NYP9 233 aa14.03□□□□□ -0.16
NUP85-220ENST00000583070 TSPYL4Q9UJ04 414 aa14.03□□□□□ -0.16
NUP85-220ENST00000583070 C4AP0C0L4 1744 aa14.03□□□□□ -0.16
NUP85-220ENST00000583070 CACNA1FO60840 1977 aa14.02□□□□□ -0.16
NUP85-220ENST00000583070 CNTNAP4Q9C0A0 1308 aa14.02□□□□□ -0.17
NUP85-220ENST00000583070 EIF4A1P60842 406 aaKnown RBP14.02□□□□□ -0.17
NUP85-220ENST00000583070 GNAI1P63096 354 aa14.02□□□□□ -0.17
NUP85-220ENST00000583070 NBPF14Q5TI25 921 aa14.02□□□□□ -0.17
NUP85-220ENST00000583070 WDR63Q8IWG1 891 aa14.02□□□□□ -0.17
NUP85-220ENST00000583070 LINC00116Q8NCU8 138 aa14.02□□□□□ -0.17
NUP85-220ENST00000583070 SENP3-EIF4A1A0A087X0R7 540 aa14.01□□□□□ -0.17
NUP85-220ENST00000583070 SLC15A2Q16348 729 aa14.01□□□□□ -0.17
NUP85-220ENST00000583070 ZNF827Q17R98 1081 aa14.01□□□□□ -0.17
NUP85-220ENST00000583070 RC3H1Q5TC82 1133 aaKnown RBP14.01□□□□□ -0.17
NUP85-220ENST00000583070 TEX13AQ9BXU3 409 aaPredicted RBP14.01□□□□□ -0.17
NUP85-220ENST00000583070 COL24A1Q17RW2 1714 aa14.01□□□□□ -0.17
NUP85-220ENST00000583070 SNRPA1P09661 255 aaKnown RBP14□□□□□ -0.17
NUP85-220ENST00000583070 DNAJC10Q8IXB1 793 aa14□□□□□ -0.17
NUP85-220ENST00000583070 MBIPQ9NS73 344 aa14□□□□□ -0.17
NUP85-220ENST00000583070 STK32BQ9NY57 414 aa14□□□□□ -0.17
NUP85-220ENST00000583070 CYP19A1P11511 503 aaPredicted RBP13.99□□□□□ -0.17
NUP85-220ENST00000583070 SALL2Q9Y467 1007 aaPredicted RBP13.99□□□□□ -0.17
NUP85-220ENST00000583070 GIGYF1O75420 1035 aaPredicted RBP13.98□□□□□ -0.17
NUP85-220ENST00000583070 STARD3NLO95772 234 aa13.98□□□□□ -0.17
NUP85-220ENST00000583070 CRKLP46109 303 aaKnown RBP13.98□□□□□ -0.17
NUP85-220ENST00000583070 LAS1LQ9Y4W2 734 aaKnown RBP13.98□□□□□ -0.17
NUP85-220ENST00000583070 SRCAPQ6ZRS2 3230 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 195.2 ms