RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 ATF5Q9Y2D1 282 aaPredicted RBP23.31■■□□□ 1.32
EIF4A1-216ENST00000580888 C5P01031 1676 aa23.3■■□□□ 1.32
EIF4A1-216ENST00000580888 CYP27B1O15528 508 aa23.3■■□□□ 1.32
EIF4A1-216ENST00000580888 FCHSD2O94868 740 aa23.3■■□□□ 1.32
EIF4A1-216ENST00000580888 PNNQ9H307 717 aaKnown RBP23.3■■□□□ 1.32
EIF4A1-216ENST00000580888 E9PSI1 815 aa23.29■■□□□ 1.32
EIF4A1-216ENST00000580888 PPM1GO15355 546 aaPredicted RBP23.29■■□□□ 1.32
EIF4A1-216ENST00000580888 WDR63Q8IWG1 891 aa23.29■■□□□ 1.32
EIF4A1-216ENST00000580888 EYA1Q99502 592 aa23.29■■□□□ 1.32
EIF4A1-216ENST00000580888 SLC16A10Q8TF71 515 aa23.28■■□□□ 1.32
EIF4A1-216ENST00000580888 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.28■■□□□ 1.32
EIF4A1-216ENST00000580888 NKX1-1Q15270 411 aaPredicted RBP23.27■■□□□ 1.32
EIF4A1-216ENST00000580888 SPINK5Q9NQ38 1064 aaPredicted RBP23.27■■□□□ 1.32
EIF4A1-216ENST00000580888 U2SURPO15042 1029 aaKnown RBP23.26■■□□□ 1.31
EIF4A1-216ENST00000580888 RSPH6AQ9H0K4 717 aa23.26■■□□□ 1.31
EIF4A1-216ENST00000580888 CCNL1Q9UK58 526 aaPredicted RBP23.26■■□□□ 1.31
EIF4A1-216ENST00000580888 PNPLA7Q6ZV29 1317 aa23.26■■□□□ 1.31
EIF4A1-216ENST00000580888 RRP1P56182 461 aaKnown RBP23.25■■□□□ 1.31
EIF4A1-216ENST00000580888 EIF4A2Q14240 407 aaKnown RBP23.25■■□□□ 1.31
EIF4A1-216ENST00000580888 SPG7Q9UQ90 795 aa23.25■■□□□ 1.31
EIF4A1-216ENST00000580888 MAP3K5Q99683 1374 aa23.25■■□□□ 1.31
EIF4A1-216ENST00000580888 HMGB2P26583 209 aaKnown RBP23.23■■□□□ 1.31
EIF4A1-216ENST00000580888 KCNQ4P56696 695 aa23.23■■□□□ 1.31
EIF4A1-216ENST00000580888 TMPOP42166 694 aaKnown RBP23.22■■□□□ 1.31
EIF4A1-216ENST00000580888 IRX6P78412 446 aaPredicted RBP23.22■■□□□ 1.31
EIF4A1-216ENST00000580888 PPP4R2Q9NY27 417 aa23.22■■□□□ 1.31
EIF4A1-216ENST00000580888 IGSF1Q8N6C5 1336 aa23.22■■□□□ 1.31
EIF4A1-216ENST00000580888 DCAF8L1A6NGE4 600 aa23.21■■□□□ 1.31
EIF4A1-216ENST00000580888 ARXQ96QS3 562 aa23.21■■□□□ 1.31
EIF4A1-216ENST00000580888 SYT17Q9BSW7 474 aa23.21■■□□□ 1.31
EIF4A1-216ENST00000580888 FHDC1Q9C0D6 1143 aaPredicted RBP23.21■■□□□ 1.31
EIF4A1-216ENST00000580888 TFCP2L1Q9NZI6 479 aa23.21■■□□□ 1.31
EIF4A1-216ENST00000580888 PALLDQ8WX93 1383 aa23.21■■□□□ 1.31
EIF4A1-216ENST00000580888 MPRIPQ6WCQ1 1025 aa23.2■■□□□ 1.3
EIF4A1-216ENST00000580888 SMARCC1Q92922 1105 aaPredicted RBP23.19■■□□□ 1.3
EIF4A1-216ENST00000580888 TRIM35Q9UPQ4 493 aa23.19■■□□□ 1.3
EIF4A1-216ENST00000580888 RRP7AQ9Y3A4 280 aaKnown RBP23.19■■□□□ 1.3
EIF4A1-216ENST00000580888 C4BP0C0L5 1744 aa23.19■■□□□ 1.3
EIF4A1-216ENST00000580888 UBR3Q6ZT12 1888 aa23.18■■□□□ 1.3
EIF4A1-216ENST00000580888 IFNL2Q8IZJ0 200 aa23.18■■□□□ 1.3
EIF4A1-216ENST00000580888 IL16Q14005 1332 aa23.17■■□□□ 1.3
EIF4A1-216ENST00000580888 MAPK8IP3Q9UPT6 1336 aa23.17■■□□□ 1.3
EIF4A1-216ENST00000580888 PHKG2P15735 406 aa23.17■■□□□ 1.3
EIF4A1-216ENST00000580888 PIGBQ92521 554 aa23.17■■□□□ 1.3
EIF4A1-216ENST00000580888 CHD4Q14839 1912 aa23.17■■□□□ 1.3
EIF4A1-216ENST00000580888 UTRNP46939 3433 aa23.15■■□□□ 1.3
EIF4A1-216ENST00000580888 PRKAR2BP31323 418 aa23.15■■□□□ 1.3
EIF4A1-216ENST00000580888 ZNF831Q5JPB2 1677 aa23.15■■□□□ 1.3
EIF4A1-216ENST00000580888 POLD1P28340 1107 aa23.14■■□□□ 1.29
EIF4A1-216ENST00000580888 NEUROD2Q15784 382 aa23.14■■□□□ 1.29
EIF4A1-216ENST00000580888 COL23A1Q86Y22 540 aaPredicted RBP23.13■■□□□ 1.29
EIF4A1-216ENST00000580888 YY1P25490 414 aa23.12■■□□□ 1.29
EIF4A1-216ENST00000580888 NFE2L2Q16236 605 aa23.12■■□□□ 1.29
EIF4A1-216ENST00000580888 FLAD1Q8NFF5 587 aa23.11■■□□□ 1.29
EIF4A1-216ENST00000580888 TMOD3Q9NYL9 352 aa23.11■■□□□ 1.29
EIF4A1-216ENST00000580888 KDRP35968 1356 aa23.11■■□□□ 1.29
EIF4A1-216ENST00000580888 RIPK4P57078 832 aa23.1■■□□□ 1.29
EIF4A1-216ENST00000580888 PHACTR3Q96KR7 559 aa23.1■■□□□ 1.29
EIF4A1-216ENST00000580888 HMOX1P09601 288 aa23.09■■□□□ 1.29
EIF4A1-216ENST00000580888 AMOTQ4VCS5 1084 aa23.09■■□□□ 1.29
EIF4A1-216ENST00000580888 MYH16Q9H6N6 1097 aa23.09■■□□□ 1.29
EIF4A1-216ENST00000580888 LOC102724428A0A0B4J2F2 783 aa23.08■■□□□ 1.29
EIF4A1-216ENST00000580888 ERVV-2B6SEH9 535 aa23.08■■□□□ 1.29
EIF4A1-216ENST00000580888 HSP90AB1P08238 724 aaKnown RBP23.08■■□□□ 1.29
EIF4A1-216ENST00000580888 SIK1P57059 783 aa23.08■■□□□ 1.29
EIF4A1-216ENST00000580888 PLEKHO1Q53GL0 409 aaPredicted RBP23.08■■□□□ 1.29
EIF4A1-216ENST00000580888 SCN11AQ9UI33 1791 aa23.07■■□□□ 1.28
EIF4A1-216ENST00000580888 NEFMP07197 916 aa23.07■■□□□ 1.28
EIF4A1-216ENST00000580888 CT47B1P0C2W7 299 aaPredicted RBP23.07■■□□□ 1.28
EIF4A1-216ENST00000580888 COL5A3P25940 1745 aaPredicted RBP23.06■■□□□ 1.28
EIF4A1-216ENST00000580888 DCAF5Q96JK2 942 aa23.06■■□□□ 1.28
EIF4A1-216ENST00000580888 ASAP1Q9ULH1 1129 aa23.06■■□□□ 1.28
EIF4A1-216ENST00000580888 KDM6AO15550 1401 aaPredicted RBP23.06■■□□□ 1.28
EIF4A1-216ENST00000580888 VIRMAQ69YN4 1812 aaKnown RBP23.05■■□□□ 1.28
EIF4A1-216ENST00000580888 ATG3Q9NT62 314 aa23.05■■□□□ 1.28
EIF4A1-216ENST00000580888 MSH5O43196 834 aa23.04■■□□□ 1.28
EIF4A1-216ENST00000580888 AEBP1Q8IUX7 1158 aa23.04■■□□□ 1.28
EIF4A1-216ENST00000580888 PELP1Q8IZL8 1130 aaKnown RBP23.04■■□□□ 1.28
EIF4A1-216ENST00000580888 AK7Q96M32 723 aa23.04■■□□□ 1.28
EIF4A1-216ENST00000580888 ZNF530Q6P9A1 599 aaPredicted RBP23.03■■□□□ 1.28
EIF4A1-216ENST00000580888 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.03■■□□□ 1.28
EIF4A1-216ENST00000580888 LINC00116Q8NCU8 138 aa23.03■■□□□ 1.28
EIF4A1-216ENST00000580888 CICQ96RK0 1608 aaPredicted RBP23.02■■□□□ 1.28
EIF4A1-216ENST00000580888 SSFA2P28290 1259 aa23.02■■□□□ 1.28
EIF4A1-216ENST00000580888 SULT6B1Q6IMI4 303 aa23.02■■□□□ 1.28
EIF4A1-216ENST00000580888 AMIGO3Q86WK7 504 aa23.02■■□□□ 1.28
EIF4A1-216ENST00000580888 FANCIQ9NVI1 1328 aa23.02■■□□□ 1.28
EIF4A1-216ENST00000580888 LMOD3Q0VAK6 560 aa23.01■■□□□ 1.27
EIF4A1-216ENST00000580888 ITPK1Q13572 414 aa23.01■■□□□ 1.27
EIF4A1-216ENST00000580888 DLG5Q8TDM6 1919 aa23.01■■□□□ 1.27
EIF4A1-216ENST00000580888 PLIN1O60240 522 aa23■■□□□ 1.27
EIF4A1-216ENST00000580888 ZNF853P0CG23 659 aa23■■□□□ 1.27
EIF4A1-216ENST00000580888 ATP6V1AP38606 617 aa23■■□□□ 1.27
EIF4A1-216ENST00000580888 EXOC6Q8TAG9 804 aa23■■□□□ 1.27
EIF4A1-216ENST00000580888 GOLGB1Q14789 3259 aaKnown RBP23■■□□□ 1.27
EIF4A1-216ENST00000580888 RARSP54136 660 aaKnown RBP22.99■■□□□ 1.27
EIF4A1-216ENST00000580888 CALD1Q05682 793 aaKnown RBP22.99■■□□□ 1.27
EIF4A1-216ENST00000580888 MYH14Q7Z406 1995 aaKnown RBP22.99■■□□□ 1.27
EIF4A1-216ENST00000580888 ADAMTS7Q9UKP4 1686 aa22.98■■□□□ 1.27
EIF4A1-216ENST00000580888 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms