RNA–Protein interactions for RNA: ENST00000580004.1

NEK4P2-201, Transcript of NIMA-related kinase 4 pseudogene 2, humanhuman

BASIC

Gene NEK4P2, Length 1,012 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P2-201ENST00000580004 PHACTR3Q96KR7 559 aa24.85■■□□□ 1.57
NEK4P2-201ENST00000580004 SLC52A2Q9HAB3 445 aa24.85■■□□□ 1.57
NEK4P2-201ENST00000580004 ATG3Q9NT62 314 aa24.85■■□□□ 1.57
NEK4P2-201ENST00000580004 NFATC2IPQ8NCF5 419 aa24.84■■□□□ 1.57
NEK4P2-201ENST00000580004 AKT1S1Q96B36 256 aa24.84■■□□□ 1.57
NEK4P2-201ENST00000580004 ASAP1Q9ULH1 1129 aa24.84■■□□□ 1.57
NEK4P2-201ENST00000580004 CICQ96RK0 1608 aaPredicted RBP24.83■■□□□ 1.56
NEK4P2-201ENST00000580004 LOC102724428A0A0B4J2F2 783 aa24.82■■□□□ 1.56
NEK4P2-201ENST00000580004 HTATSF1O43719 755 aaKnown RBP24.82■■□□□ 1.56
NEK4P2-201ENST00000580004 SIK1P57059 783 aa24.82■■□□□ 1.56
NEK4P2-201ENST00000580004 LGR6Q9HBX8 967 aa24.82■■□□□ 1.56
NEK4P2-201ENST00000580004 SIPA1L3O60292 1781 aaPredicted RBP24.82■■□□□ 1.56
NEK4P2-201ENST00000580004 C4BP0C0L5 1744 aa24.81■■□□□ 1.56
NEK4P2-201ENST00000580004 CEMIPQ8WUJ3 1361 aa24.8■■□□□ 1.56
NEK4P2-201ENST00000580004 TUBGCP6Q96RT7 1819 aa24.8■■□□□ 1.56
NEK4P2-201ENST00000580004 PLEKHF1Q96S99 279 aa24.8■■□□□ 1.56
NEK4P2-201ENST00000580004 ZNF827Q17R98 1081 aa24.79■■□□□ 1.56
NEK4P2-201ENST00000580004 DLG5Q8TDM6 1919 aa24.78■■□□□ 1.56
NEK4P2-201ENST00000580004 COL5A3P25940 1745 aaPredicted RBP24.78■■□□□ 1.56
NEK4P2-201ENST00000580004 KCNQ4P56696 695 aa24.77■■□□□ 1.56
NEK4P2-201ENST00000580004 TEFQ10587 303 aa24.77■■□□□ 1.56
NEK4P2-201ENST00000580004 IL17REQ8NFR9 667 aa24.77■■□□□ 1.56
NEK4P2-201ENST00000580004 RTF1Q92541 710 aaKnown RBP24.77■■□□□ 1.56
NEK4P2-201ENST00000580004 MAPK8IP3Q9UPT6 1336 aa24.77■■□□□ 1.56
NEK4P2-201ENST00000580004 UBR2Q8IWV8 1755 aa24.77■■□□□ 1.56
NEK4P2-201ENST00000580004 ANP32CO43423 234 aa24.76■■□□□ 1.55
NEK4P2-201ENST00000580004 ATP6V1AP38606 617 aa24.76■■□□□ 1.55
NEK4P2-201ENST00000580004 WDR43Q15061 677 aaKnown RBP eCLIP24.76■■□□□ 1.55
NEK4P2-201ENST00000580004 TFCP2L1Q9NZI6 479 aa24.76■■□□□ 1.55
NEK4P2-201ENST00000580004 FLAD1Q8NFF5 587 aa24.75■■□□□ 1.55
NEK4P2-201ENST00000580004 UBR3Q6ZT12 1888 aa24.75■■□□□ 1.55
NEK4P2-201ENST00000580004 SLC16A10Q8TF71 515 aa24.74■■□□□ 1.55
NEK4P2-201ENST00000580004 SPON1Q9HCB6 807 aa24.73■■□□□ 1.55
NEK4P2-201ENST00000580004 PNPLA7Q6ZV29 1317 aa24.72■■□□□ 1.55
NEK4P2-201ENST00000580004 NFE2L2Q16236 605 aa24.72■■□□□ 1.55
NEK4P2-201ENST00000580004 RBM42Q9BTD8 480 aaKnown RBP24.72■■□□□ 1.55
NEK4P2-201ENST00000580004 ITPK1Q13572 414 aa24.71■■□□□ 1.55
NEK4P2-201ENST00000580004 VSIG10Q8N0Z9 540 aa24.71■■□□□ 1.55
NEK4P2-201ENST00000580004 AK7Q96M32 723 aa24.71■■□□□ 1.55
NEK4P2-201ENST00000580004 MTFR1LQ9H019 292 aa24.71■■□□□ 1.55
NEK4P2-201ENST00000580004 TJP1Q07157 1748 aa24.71■■□□□ 1.55
NEK4P2-201ENST00000580004 COL24A1Q17RW2 1714 aa24.71■■□□□ 1.55
NEK4P2-201ENST00000580004 KCPQ6ZWJ8 1503 aa24.71■■□□□ 1.55
NEK4P2-201ENST00000580004 RC3H1Q5TC82 1133 aaKnown RBP24.7■■□□□ 1.54
NEK4P2-201ENST00000580004 LINC00116Q8NCU8 138 aa24.7■■□□□ 1.54
NEK4P2-201ENST00000580004 SLC4A9Q96Q91 983 aa24.7■■□□□ 1.54
NEK4P2-201ENST00000580004 PTCD1O75127 700 aaKnown RBP24.69■■□□□ 1.54
NEK4P2-201ENST00000580004 TTC5Q8N0Z6 440 aa24.69■■□□□ 1.54
NEK4P2-201ENST00000580004 CNTNAP4Q9C0A0 1308 aa24.68■■□□□ 1.54
NEK4P2-201ENST00000580004 SSFA2P28290 1259 aa24.68■■□□□ 1.54
NEK4P2-201ENST00000580004 ZNF790Q6PG37 636 aa24.67■■□□□ 1.54
NEK4P2-201ENST00000580004 RUNDC1Q96C34 613 aa24.67■■□□□ 1.54
NEK4P2-201ENST00000580004 PDGFDQ9GZP0 370 aaPredicted RBP24.67■■□□□ 1.54
NEK4P2-201ENST00000580004 ADAMTS8Q9UP79 889 aa24.67■■□□□ 1.54
NEK4P2-201ENST00000580004 LMOD3Q0VAK6 560 aa24.66■■□□□ 1.54
NEK4P2-201ENST00000580004 SLC39A6Q13433 755 aa24.65■■□□□ 1.54
NEK4P2-201ENST00000580004 MCM10Q7L590 875 aa24.65■■□□□ 1.54
NEK4P2-201ENST00000580004 MYH14Q7Z406 1995 aaKnown RBP24.65■■□□□ 1.54
NEK4P2-201ENST00000580004 BTBD11A6QL63 1104 aa24.64■■□□□ 1.54
NEK4P2-201ENST00000580004 ZBTB7AO95365 584 aa24.63■■□□□ 1.53
NEK4P2-201ENST00000580004 ADRA2BP18089 450 aa24.63■■□□□ 1.53
NEK4P2-201ENST00000580004 GNPATO15228 680 aa24.62■■□□□ 1.53
NEK4P2-201ENST00000580004 TMPOP42166 694 aaKnown RBP24.62■■□□□ 1.53
NEK4P2-201ENST00000580004 TAF7Q15545 349 aaPredicted RBP24.62■■□□□ 1.53
NEK4P2-201ENST00000580004 COL23A1Q86Y22 540 aaPredicted RBP24.62■■□□□ 1.53
NEK4P2-201ENST00000580004 PNISRQ8TF01 805 aaKnown RBP24.62■■□□□ 1.53
NEK4P2-201ENST00000580004 TEX13AQ9BXU3 409 aaPredicted RBP24.62■■□□□ 1.53
NEK4P2-201ENST00000580004 RIPK4P57078 832 aa24.61■■□□□ 1.53
NEK4P2-201ENST00000580004 FMNL2Q96PY5 1086 aa24.61■■□□□ 1.53
NEK4P2-201ENST00000580004 RTCBQ9Y3I0 505 aaKnown RBP24.61■■□□□ 1.53
NEK4P2-201ENST00000580004 HEG1Q9ULI3 1381 aa24.61■■□□□ 1.53
NEK4P2-201ENST00000580004 KDM3BQ7LBC6 1761 aa24.6■■□□□ 1.53
NEK4P2-201ENST00000580004 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.6■■□□□ 1.53
NEK4P2-201ENST00000580004 RPS6KA4O75676 772 aa24.6■■□□□ 1.53
NEK4P2-201ENST00000580004 PTGER2P43116 358 aa24.6■■□□□ 1.53
NEK4P2-201ENST00000580004 DCTN1Q14203 1278 aa24.6■■□□□ 1.53
NEK4P2-201ENST00000580004 SGIP1Q9BQI5 828 aa24.6■■□□□ 1.53
NEK4P2-201ENST00000580004 CRKLP46109 303 aaKnown RBP24.59■■□□□ 1.53
NEK4P2-201ENST00000580004 CCDC146Q8IYE0 955 aa24.58■■□□□ 1.53
NEK4P2-201ENST00000580004 ZNF496Q96IT1 587 aaPredicted RBP24.58■■□□□ 1.53
NEK4P2-201ENST00000580004 ATF5Q9Y2D1 282 aaPredicted RBP24.58■■□□□ 1.53
NEK4P2-201ENST00000580004 MSH5O43196 834 aa24.57■■□□□ 1.52
NEK4P2-201ENST00000580004 CYP19A1P11511 503 aaPredicted RBP24.57■■□□□ 1.52
NEK4P2-201ENST00000580004 DNAJC10Q8IXB1 793 aa24.57■■□□□ 1.52
NEK4P2-201ENST00000580004 MRS2Q9HD23 443 aa24.57■■□□□ 1.52
NEK4P2-201ENST00000580004 BABAM1Q9NWV8 329 aa24.57■■□□□ 1.52
NEK4P2-201ENST00000580004 PPP1R1BQ9UD71 204 aaPredicted RBP24.57■■□□□ 1.52
NEK4P2-201ENST00000580004 STARD3NLO95772 234 aa24.56■■□□□ 1.52
NEK4P2-201ENST00000580004 POLD1P28340 1107 aa24.56■■□□□ 1.52
NEK4P2-201ENST00000580004 TRAPPC3LQ5T215 181 aa24.56■■□□□ 1.52
NEK4P2-201ENST00000580004 CCDC87Q9NVE4 849 aa24.56■■□□□ 1.52
NEK4P2-201ENST00000580004 C4AP0C0L4 1744 aa24.55■■□□□ 1.52
NEK4P2-201ENST00000580004 AMIGO3Q86WK7 504 aa24.55■■□□□ 1.52
NEK4P2-201ENST00000580004 PHF14O94880 888 aa24.54■■□□□ 1.52
NEK4P2-201ENST00000580004 CCDC184Q52MB2 194 aa24.54■■□□□ 1.52
NEK4P2-201ENST00000580004 INTS5Q6P9B9 1019 aaKnown RBP24.54■■□□□ 1.52
NEK4P2-201ENST00000580004 LAMB4A4D0S4 1761 aa24.52■■□□□ 1.52
NEK4P2-201ENST00000580004 SNRPA1P09661 255 aaKnown RBP24.51■■□□□ 1.51
NEK4P2-201ENST00000580004 ARXQ96QS3 562 aa24.51■■□□□ 1.51
NEK4P2-201ENST00000580004 KCNQ3O43525 872 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms