RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 ZSCAN23Q3MJ62 389 aa16.57■□□□□ 0.24
NDEL1-204ENST00000578172 ZNF530Q6P9A1 599 aaPredicted RBP16.57■□□□□ 0.24
NDEL1-204ENST00000578172 FBXW7Q969H0 707 aa16.57■□□□□ 0.24
NDEL1-204ENST00000578172 FAM135BQ49AJ0 1406 aa16.57■□□□□ 0.24
NDEL1-204ENST00000578172 ABCA9Q8IUA7 1624 aa16.57■□□□□ 0.24
NDEL1-204ENST00000578172 GNAI3P08754 354 aa16.57■□□□□ 0.24
NDEL1-204ENST00000578172 ZNF830Q96NB3 372 aaPredicted RBP16.57■□□□□ 0.24
NDEL1-204ENST00000578172 CHPF2Q9P2E5 772 aa16.57■□□□□ 0.24
NDEL1-204ENST00000578172 HECW2Q9P2P5 1572 aa16.56■□□□□ 0.24
NDEL1-204ENST00000578172 ROBO2Q9HCK4 1378 aa16.56■□□□□ 0.24
NDEL1-204ENST00000578172 SRCIN1Q9C0H9 1055 aa16.56■□□□□ 0.24
NDEL1-204ENST00000578172 CCDC8Q9H0W5 538 aaPredicted RBP16.56■□□□□ 0.24
NDEL1-204ENST00000578172 RTL1A6NKG5 1358 aa16.56■□□□□ 0.24
NDEL1-204ENST00000578172 NBPF7P0C2Y1 421 aaPredicted RBP16.55■□□□□ 0.24
NDEL1-204ENST00000578172 PTPRMP28827 1452 aa16.55■□□□□ 0.24
NDEL1-204ENST00000578172 RBSNQ9H1K0 784 aa16.55■□□□□ 0.24
NDEL1-204ENST00000578172 SHPRHQ149N8 1683 aa16.55■□□□□ 0.24
NDEL1-204ENST00000578172 ZMYND15Q9H091 742 aa16.55■□□□□ 0.24
NDEL1-204ENST00000578172 NEXMIFQ5QGS0 1516 aa16.55■□□□□ 0.24
NDEL1-204ENST00000578172 NRXN1Q9ULB1 1477 aa16.54■□□□□ 0.24
NDEL1-204ENST00000578172 FSD2A1L4K1 749 aa16.54■□□□□ 0.24
NDEL1-204ENST00000578172 KDM4AO75164 1064 aa16.54■□□□□ 0.24
NDEL1-204ENST00000578172 IFIT2P09913 472 aaKnown RBP16.54■□□□□ 0.24
NDEL1-204ENST00000578172 ZFYVE9O95405 1425 aa16.54■□□□□ 0.24
NDEL1-204ENST00000578172 FRMPD1Q5SYB0 1578 aa16.54■□□□□ 0.24
NDEL1-204ENST00000578172 KCNA6P17658 529 aa16.54■□□□□ 0.24
NDEL1-204ENST00000578172 CWF19L2Q2TBE0 894 aaKnown RBP16.54■□□□□ 0.24
NDEL1-204ENST00000578172 KLHDC4Q8TBB5 520 aa16.54■□□□□ 0.24
NDEL1-204ENST00000578172 NDUFB9Q9Y6M9 179 aa16.54■□□□□ 0.24
NDEL1-204ENST00000578172 SLC39A6Q13433 755 aa16.53■□□□□ 0.24
NDEL1-204ENST00000578172 CCDC83Q8IWF9 413 aa16.53■□□□□ 0.24
NDEL1-204ENST00000578172 VWDEQ8N2E2 1590 aa16.53■□□□□ 0.24
NDEL1-204ENST00000578172 EDC4Q6P2E9 1401 aaKnown RBP16.53■□□□□ 0.24
NDEL1-204ENST00000578172 IL17REQ8NFR9 667 aa16.53■□□□□ 0.24
NDEL1-204ENST00000578172 ESYT1Q9BSJ8 1104 aa16.53■□□□□ 0.24
NDEL1-204ENST00000578172 CD163L1Q9NR16 1453 aa16.53■□□□□ 0.24
NDEL1-204ENST00000578172 CEBPZQ03701 1054 aaKnown RBP16.53■□□□□ 0.24
NDEL1-204ENST00000578172 C1orf141Q5JVX7 400 aa16.53■□□□□ 0.24
NDEL1-204ENST00000578172 NECAB1Q8N987 351 aa16.53■□□□□ 0.24
NDEL1-204ENST00000578172 BTBD11A6QL63 1104 aa16.52■□□□□ 0.24
NDEL1-204ENST00000578172 DEPDC5O75140 1603 aa16.52■□□□□ 0.23
NDEL1-204ENST00000578172 PRAMEF22A3QJZ6 481 aa16.52■□□□□ 0.23
NDEL1-204ENST00000578172 PRPF40BQ6NWY9 871 aaKnown RBP16.52■□□□□ 0.23
NDEL1-204ENST00000578172 CASTP20810 708 aaKnown RBP16.51■□□□□ 0.23
NDEL1-204ENST00000578172 KLHL40Q2TBA0 621 aa16.51■□□□□ 0.23
NDEL1-204ENST00000578172 BOLA2Q9H3K6 86 aa16.51■□□□□ 0.23
NDEL1-204ENST00000578172 NLRP2Q9NX02 1062 aa16.51■□□□□ 0.23
NDEL1-204ENST00000578172 SMC3Q9UQE7 1217 aa16.51■□□□□ 0.23
NDEL1-204ENST00000578172 GADD45BO75293 160 aaPredicted RBP16.51■□□□□ 0.23
NDEL1-204ENST00000578172 PNPLA6Q8IY17 1366 aa16.51■□□□□ 0.23
NDEL1-204ENST00000578172 FAM173BQ6P4H8 233 aa16.51■□□□□ 0.23
NDEL1-204ENST00000578172 SPC24Q8NBT2 197 aa16.51■□□□□ 0.23
NDEL1-204ENST00000578172 JAKMIP1Q96N16 626 aaKnown RBP16.51■□□□□ 0.23
NDEL1-204ENST00000578172 PTPRCP08575 1304 aa16.51■□□□□ 0.23
NDEL1-204ENST00000578172 AACSQ86V21 672 aa16.51■□□□□ 0.23
NDEL1-204ENST00000578172 CCDC85AQ96PX6 553 aaPredicted RBP16.51■□□□□ 0.23
NDEL1-204ENST00000578172 TMEM63CQ9P1W3 806 aa16.51■□□□□ 0.23
NDEL1-204ENST00000578172 GOLGA6L4A6NEF3 574 aa16.5■□□□□ 0.23
NDEL1-204ENST00000578172 CPS1P31327 1500 aa16.5■□□□□ 0.23
NDEL1-204ENST00000578172 TNRQ92752 1358 aa16.5■□□□□ 0.23
NDEL1-204ENST00000578172 IL25Q9H293 177 aa16.5■□□□□ 0.23
NDEL1-204ENST00000578172 CHMLP26374 656 aa16.5■□□□□ 0.23
NDEL1-204ENST00000578172 LMBRD1Q9NUN5 540 aa16.5■□□□□ 0.23
NDEL1-204ENST00000578172 HSP90B1P14625 803 aaKnown RBP16.49■□□□□ 0.23
NDEL1-204ENST00000578172 RIC3Q7Z5B4 369 aa16.49■□□□□ 0.23
NDEL1-204ENST00000578172 GPT2Q8TD30 523 aa16.49■□□□□ 0.23
NDEL1-204ENST00000578172 ALKQ9UM73 1620 aa16.49■□□□□ 0.23
NDEL1-204ENST00000578172 CLASRPQ8N2M8 674 aaKnown RBP16.49■□□□□ 0.23
NDEL1-204ENST00000578172 CNPY2Q9Y2B0 182 aa16.49■□□□□ 0.23
NDEL1-204ENST00000578172 ARAP3Q8WWN8 1544 aa16.49■□□□□ 0.23
NDEL1-204ENST00000578172 FAM177BA6PVY3 158 aa16.49■□□□□ 0.23
NDEL1-204ENST00000578172 RHPN1Q8TCX5 695 aa16.49■□□□□ 0.23
NDEL1-204ENST00000578172 SETBP1Q9Y6X0 1596 aa16.49■□□□□ 0.23
NDEL1-204ENST00000578172 PIK3C2BO00750 1634 aa16.49■□□□□ 0.23
NDEL1-204ENST00000578172 CAMK4Q16566 473 aa16.48■□□□□ 0.23
NDEL1-204ENST00000578172 CLCN1P35523 988 aa16.48■□□□□ 0.23
NDEL1-204ENST00000578172 CCDC173Q0VFZ6 552 aa16.48■□□□□ 0.23
NDEL1-204ENST00000578172 DRC7Q8IY82 874 aa16.48■□□□□ 0.23
NDEL1-204ENST00000578172 C17orf53Q8N3J3 647 aaPredicted RBP16.48■□□□□ 0.23
NDEL1-204ENST00000578172 DNAJC2Q99543 621 aaKnown RBP16.48■□□□□ 0.23
NDEL1-204ENST00000578172 USP44Q9H0E7 712 aa16.48■□□□□ 0.23
NDEL1-204ENST00000578172 USP25Q9UHP3 1055 aa16.48■□□□□ 0.23
NDEL1-204ENST00000578172 ZC3H13Q5T200 1668 aaKnown RBP16.47■□□□□ 0.23
NDEL1-204ENST00000578172 HOXC9P31274 260 aa16.47■□□□□ 0.23
NDEL1-204ENST00000578172 PTMSP20962 102 aa16.47■□□□□ 0.23
NDEL1-204ENST00000578172 ATP8B2P98198 1209 aa16.47■□□□□ 0.23
NDEL1-204ENST00000578172 DDX17Q92841 729 aaKnown RBP16.47■□□□□ 0.23
NDEL1-204ENST00000578172 EDC3Q96F86 508 aaKnown RBP16.47■□□□□ 0.23
NDEL1-204ENST00000578172 MAP3K2Q9Y2U5 619 aa16.47■□□□□ 0.23
NDEL1-204ENST00000578172 ARHGEF40Q8TER5 1519 aa16.47■□□□□ 0.23
NDEL1-204ENST00000578172 PPLO60437 1756 aa16.47■□□□□ 0.23
NDEL1-204ENST00000578172 FSD1Q9BTV5 496 aa16.47■□□□□ 0.23
NDEL1-204ENST00000578172 COL3A1P02461 1466 aaPredicted RBP16.47■□□□□ 0.23
NDEL1-204ENST00000578172 CNTROBQ8N137 903 aa16.46■□□□□ 0.23
NDEL1-204ENST00000578172 G3BP1Q13283 466 aaKnown RBP eCLIP16.46■□□□□ 0.22
NDEL1-204ENST00000578172 NBPF6Q5VWK0 638 aa16.46■□□□□ 0.22
NDEL1-204ENST00000578172 DNAAF4Q8WXU2 420 aa16.46■□□□□ 0.22
NDEL1-204ENST00000578172 NBPF4Q96M43 638 aa16.46■□□□□ 0.22
NDEL1-204ENST00000578172 LRRC2Q9BYS8 371 aa16.46■□□□□ 0.22
NDEL1-204ENST00000578172 KIAA1210Q9ULL0 1709 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms