RNA–Protein interactions for RNA: ENST00000576979.1

CTNS-210, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-210ENST00000576979 PTPN23Q9H3S7 1636 aa8.03□□□□□ -1.12
CTNS-210ENST00000576979 GCC2Q8IWJ2 1684 aa8.03□□□□□ -1.12
CTNS-210ENST00000576979 SNAPC4Q5SXM2 1469 aa8.03□□□□□ -1.12
CTNS-210ENST00000576979 MTUS2Q5JR59 1369 aa8.03□□□□□ -1.12
CTNS-210ENST00000576979 DBN1Q16643 649 aa8.03□□□□□ -1.12
CTNS-210ENST00000576979 LYSMD3Q7Z3D4 306 aa8.03□□□□□ -1.12
CTNS-210ENST00000576979 PRICKLE2Q7Z3G6 844 aa8.03□□□□□ -1.12
CTNS-210ENST00000576979 SLC10A4Q96EP9 437 aa8.03□□□□□ -1.12
CTNS-210ENST00000576979 HECW1Q76N89 1606 aa8.03□□□□□ -1.12
CTNS-210ENST00000576979 URB2Q14146 1524 aaKnown RBP8.03□□□□□ -1.12
CTNS-210ENST00000576979 CCDC18Q5T9S5 1454 aa8.02□□□□□ -1.13
CTNS-210ENST00000576979 NUTM2BA6NNL0 878 aaPredicted RBP8.02□□□□□ -1.13
CTNS-210ENST00000576979 NUTM2EB1AL46 878 aaPredicted RBP8.02□□□□□ -1.13
CTNS-210ENST00000576979 ADD1P35611 737 aaKnown RBP8.02□□□□□ -1.13
CTNS-210ENST00000576979 DHX9Q08211 1270 aaKnown RBP8.02□□□□□ -1.13
CTNS-210ENST00000576979 NUTM2DQ5VT03 806 aaPredicted RBP8.02□□□□□ -1.13
CTNS-210ENST00000576979 NUTM2AQ8IVF1 878 aaPredicted RBP8.02□□□□□ -1.13
CTNS-210ENST00000576979 TRIM22Q8IYM9 498 aa8.02□□□□□ -1.13
CTNS-210ENST00000576979 ZNF784Q8NCA9 323 aaPredicted RBP8.02□□□□□ -1.13
CTNS-210ENST00000576979 GAPVD1Q14C86 1478 aa8.01□□□□□ -1.13
CTNS-210ENST00000576979 ADH1AP07327 375 aa8.01□□□□□ -1.13
CTNS-210ENST00000576979 COL8A1P27658 744 aa8.01□□□□□ -1.13
CTNS-210ENST00000576979 RAB15P59190 212 aa8.01□□□□□ -1.13
CTNS-210ENST00000576979 DIXDC1Q155Q3 683 aa8.01□□□□□ -1.13
CTNS-210ENST00000576979 RTL5Q5HYW3 569 aaPredicted RBP8.01□□□□□ -1.13
CTNS-210ENST00000576979 GTPBP3Q969Y2 492 aaKnown RBP8.01□□□□□ -1.13
CTNS-210ENST00000576979 ARHGAP9Q9BRR9 750 aa8.01□□□□□ -1.13
CTNS-210ENST00000576979 PDS5BQ9NTI5 1447 aa8.01□□□□□ -1.13
CTNS-210ENST00000576979 ITGB7P26010 798 aa8□□□□□ -1.13
CTNS-210ENST00000576979 RIPOR1Q6ZS17 1223 aa8□□□□□ -1.13
CTNS-210ENST00000576979 PARP9Q8IXQ6 854 aa8□□□□□ -1.13
CTNS-210ENST00000576979 GRIN2BQ13224 1484 aa8□□□□□ -1.13
CTNS-210ENST00000576979 TONSLQ96HA7 1378 aa7.99□□□□□ -1.13
CTNS-210ENST00000576979 LILRA1O75019 489 aa7.99□□□□□ -1.13
CTNS-210ENST00000576979 LILRB3O75022 631 aa7.99□□□□□ -1.13
CTNS-210ENST00000576979 PTGIRP43119 386 aa7.99□□□□□ -1.13
CTNS-210ENST00000576979 MYOM3Q5VTT5 1437 aa7.99□□□□□ -1.13
CTNS-210ENST00000576979 GPKOWQ92917 476 aaPredicted RBP eCLIP7.99□□□□□ -1.13
CTNS-210ENST00000576979 OCSTAMPQ9BR26 566 aa7.99□□□□□ -1.13
CTNS-210ENST00000576979 PODXL2Q9NZ53 605 aa7.99□□□□□ -1.13
CTNS-210ENST00000576979 NCOA2Q15596 1464 aa7.99□□□□□ -1.13
CTNS-210ENST00000576979 HFM1A2PYH4 1435 aa7.98□□□□□ -1.13
CTNS-210ENST00000576979 UACAQ9BZF9 1416 aa7.98□□□□□ -1.13
CTNS-210ENST00000576979 SHISA8B8ZZ34 492 aa7.98□□□□□ -1.13
CTNS-210ENST00000576979 OIP5O43482 229 aa7.98□□□□□ -1.13
CTNS-210ENST00000576979 BRPF1P55201 1214 aaPredicted RBP7.98□□□□□ -1.13
CTNS-210ENST00000576979 SIN3AQ96ST3 1273 aa7.98□□□□□ -1.13
CTNS-210ENST00000576979 SUPT16HQ9Y5B9 1047 aaKnown RBP7.98□□□□□ -1.13
CTNS-210ENST00000576979 TARBP1Q13395 1621 aaKnown RBP7.98□□□□□ -1.13
CTNS-210ENST00000576979 UGGT2Q9NYU1 1516 aa7.98□□□□□ -1.13
CTNS-210ENST00000576979 LCE3BQ5TA77 95 aa7.97□□□□□ -1.13
CTNS-210ENST00000576979 HELBQ8NG08 1087 aaPredicted RBP7.97□□□□□ -1.13
CTNS-210ENST00000576979 IQGAP2Q13576 1575 aa7.97□□□□□ -1.13
CTNS-210ENST00000576979 ANP32CO43423 234 aa7.96□□□□□ -1.14
CTNS-210ENST00000576979 PPP1R15AO75807 674 aaPredicted RBP7.96□□□□□ -1.14
CTNS-210ENST00000576979 DDX10Q13206 875 aaKnown RBP7.96□□□□□ -1.14
CTNS-210ENST00000576979 MYSM1Q5VVJ2 828 aa7.96□□□□□ -1.14
CTNS-210ENST00000576979 PDXDC2PQ6P474 469 aa7.96□□□□□ -1.14
CTNS-210ENST00000576979 FOXR1Q6PIV2 292 aa7.96□□□□□ -1.14
CTNS-210ENST00000576979 ZBTB33Q86T24 672 aa7.96□□□□□ -1.14
CTNS-210ENST00000576979 CDV3Q9UKY7 258 aaKnown RBP7.96□□□□□ -1.14
CTNS-210ENST00000576979 ADAMTS12P58397 1594 aa7.96□□□□□ -1.14
CTNS-210ENST00000576979 CCER2I3L3R5 266 aa7.95□□□□□ -1.14
CTNS-210ENST00000576979 MX2P20592 715 aa7.95□□□□□ -1.14
CTNS-210ENST00000576979 C1orf229Q6ZS94 237 aaPredicted RBP7.95□□□□□ -1.14
CTNS-210ENST00000576979 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.95□□□□□ -1.14
CTNS-210ENST00000576979 TDRD9Q8NDG6 1382 aaKnown RBP7.95□□□□□ -1.14
CTNS-210ENST00000576979 TCOF1Q13428 1488 aaKnown RBP7.94□□□□□ -1.14
CTNS-210ENST00000576979 ARHGEF11O15085 1522 aa7.94□□□□□ -1.14
CTNS-210ENST00000576979 ERVH48-1M5A8F1 160 aa7.94□□□□□ -1.14
CTNS-210ENST00000576979 CTDSPL2Q05D32 466 aa7.94□□□□□ -1.14
CTNS-210ENST00000576979 BARGINQ6ZT62 677 aa7.94□□□□□ -1.14
CTNS-210ENST00000576979 GMCL1Q96IK5 515 aa7.94□□□□□ -1.14
CTNS-210ENST00000576979 GAS2L1Q99501 681 aaPredicted RBP7.94□□□□□ -1.14
CTNS-210ENST00000576979 KRTAP4-12Q9BQ66 201 aa7.94□□□□□ -1.14
CTNS-210ENST00000576979 SUV39H2Q9H5I1 410 aa7.94□□□□□ -1.14
CTNS-210ENST00000576979 FKBPLQ9UIM3 349 aa7.94□□□□□ -1.14
CTNS-210ENST00000576979 NAIPQ13075 1403 aa7.94□□□□□ -1.14
CTNS-210ENST00000576979 POLR1AO95602 1720 aaPredicted RBP7.93□□□□□ -1.14
CTNS-210ENST00000576979 NEFLP07196 543 aa7.93□□□□□ -1.14
CTNS-210ENST00000576979 RNF144AP50876 292 aaPredicted RBP7.93□□□□□ -1.14
CTNS-210ENST00000576979 GRIN2CQ14957 1233 aa7.93□□□□□ -1.14
CTNS-210ENST00000576979 LRRN4Q8WUT4 740 aa7.93□□□□□ -1.14
CTNS-210ENST00000576979 LRRC4BQ9NT99 713 aa7.93□□□□□ -1.14
CTNS-210ENST00000576979 AKNAQ7Z591 1439 aa7.93□□□□□ -1.14
CTNS-210ENST00000576979 ADAM32Q8TC27 787 aa7.92□□□□□ -1.14
CTNS-210ENST00000576979 OXCT2Q9BYC2 517 aaPredicted RBP7.92□□□□□ -1.14
CTNS-210ENST00000576979 CYLDQ9NQC7 956 aa7.92□□□□□ -1.14
CTNS-210ENST00000576979 MKL2Q9ULH7 1088 aa7.92□□□□□ -1.14
CTNS-210ENST00000576979 WDR62O43379 1518 aa7.92□□□□□ -1.14
CTNS-210ENST00000576979 C1QTNF9BB2RNN3 333 aa7.91□□□□□ -1.14
CTNS-210ENST00000576979 NEUROD2Q15784 382 aa7.91□□□□□ -1.14
CTNS-210ENST00000576979 TRERF1Q96PN7 1200 aa7.91□□□□□ -1.14
CTNS-210ENST00000576979 RRAGCQ9HB90 399 aa7.91□□□□□ -1.14
CTNS-210ENST00000576979 PTPRKQ15262 1439 aa7.91□□□□□ -1.14
CTNS-210ENST00000576979 EPRSP07814 1512 aaKnown RBP7.91□□□□□ -1.14
CTNS-210ENST00000576979 MAGI3Q5TCQ9 1506 aa7.91□□□□□ -1.14
CTNS-210ENST00000576979 ADGBQ8N7X0 1667 aa7.91□□□□□ -1.14
CTNS-210ENST00000576979 ITSN2Q9NZM3 1697 aa7.91□□□□□ -1.14
CTNS-210ENST00000576979 MRC2Q9UBG0 1479 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms