RNA–Protein interactions for RNA: ENST00000575397.5

RFWD3-211, Transcript of ring finger and WD repeat domain 3, humanhuman

TSL 2

Gene RFWD3, Length 841 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3-211ENST00000575397 ITGB4P16144 1822 aa12.69□□□□□ -0.38
RFWD3-211ENST00000575397 LINC00116Q8NCU8 138 aa12.68□□□□□ -0.38
RFWD3-211ENST00000575397 CICQ96RK0 1608 aaPredicted RBP12.67□□□□□ -0.38
RFWD3-211ENST00000575397 APLP1P51693 650 aa12.67□□□□□ -0.38
RFWD3-211ENST00000575397 CCDC184Q52MB2 194 aa12.67□□□□□ -0.38
RFWD3-211ENST00000575397 DNAJC5GQ8N7S2 189 aa12.67□□□□□ -0.38
RFWD3-211ENST00000575397 PIGBQ92521 554 aa12.67□□□□□ -0.38
RFWD3-211ENST00000575397 PUS7Q96PZ0 661 aaKnown RBP12.67□□□□□ -0.38
RFWD3-211ENST00000575397 TESK2Q96S53 571 aa12.67□□□□□ -0.38
RFWD3-211ENST00000575397 PPP4R2Q9NY27 417 aa12.67□□□□□ -0.38
RFWD3-211ENST00000575397 PXDNLA1KZ92 1463 aa12.66□□□□□ -0.38
RFWD3-211ENST00000575397 FYB1O15117 783 aa12.66□□□□□ -0.38
RFWD3-211ENST00000575397 SSFA2P28290 1259 aa12.66□□□□□ -0.38
RFWD3-211ENST00000575397 CDCA8Q53HL2 280 aa12.66□□□□□ -0.38
RFWD3-211ENST00000575397 SMARCC1Q92922 1105 aaPredicted RBP12.66□□□□□ -0.38
RFWD3-211ENST00000575397 NMRK2Q9NPI5 230 aa12.66□□□□□ -0.38
RFWD3-211ENST00000575397 BCS1LQ9Y276 419 aa12.66□□□□□ -0.38
RFWD3-211ENST00000575397 N4BP2Q86UW6 1770 aaPredicted RBP12.66□□□□□ -0.38
RFWD3-211ENST00000575397 KIAA1551Q9HCM1 1747 aa12.65□□□□□ -0.38
RFWD3-211ENST00000575397 MAP2P11137 1827 aaKnown RBP12.65□□□□□ -0.38
RFWD3-211ENST00000575397 NSD3Q9BZ95 1437 aa12.65□□□□□ -0.38
RFWD3-211ENST00000575397 LOC102724428A0A0B4J2F2 783 aa12.65□□□□□ -0.38
RFWD3-211ENST00000575397 GNPATO15228 680 aa12.65□□□□□ -0.38
RFWD3-211ENST00000575397 TOMM70O94826 608 aa12.65□□□□□ -0.38
RFWD3-211ENST00000575397 SIK1P57059 783 aa12.65□□□□□ -0.38
RFWD3-211ENST00000575397 TMF1P82094 1093 aa12.65□□□□□ -0.38
RFWD3-211ENST00000575397 HTRA3P83110 453 aa12.65□□□□□ -0.38
RFWD3-211ENST00000575397 ITPK1Q13572 414 aa12.65□□□□□ -0.38
RFWD3-211ENST00000575397 PNISRQ8TF01 805 aaKnown RBP12.65□□□□□ -0.38
RFWD3-211ENST00000575397 PKD1L3Q7Z443 1732 aa12.65□□□□□ -0.38
RFWD3-211ENST00000575397 A0A0G2JLW4 131 aa12.64□□□□□ -0.39
RFWD3-211ENST00000575397 MMP10P09238 476 aa12.64□□□□□ -0.39
RFWD3-211ENST00000575397 NUDCQ9Y266 331 aa12.64□□□□□ -0.39
RFWD3-211ENST00000575397 HMGB2P26583 209 aaKnown RBP12.63□□□□□ -0.39
RFWD3-211ENST00000575397 ATP6V1AP38606 617 aa12.63□□□□□ -0.39
RFWD3-211ENST00000575397 ARHGAP27Q6ZUM4 889 aa12.63□□□□□ -0.39
RFWD3-211ENST00000575397 ASAP1Q9ULH1 1129 aa12.63□□□□□ -0.39
RFWD3-211ENST00000575397 EMILIN1Q9Y6C2 1016 aa12.63□□□□□ -0.39
RFWD3-211ENST00000575397 FLT4P35916 1363 aa12.63□□□□□ -0.39
RFWD3-211ENST00000575397 RNF123Q5XPI4 1314 aa12.62□□□□□ -0.39
RFWD3-211ENST00000575397 WDR90Q96KV7 1748 aa12.62□□□□□ -0.39
RFWD3-211ENST00000575397 CAPN15O75808 1086 aa12.62□□□□□ -0.39
RFWD3-211ENST00000575397 KIF13BQ9NQT8 1826 aa12.62□□□□□ -0.39
RFWD3-211ENST00000575397 KIF20BQ96Q89 1820 aa12.61□□□□□ -0.39
RFWD3-211ENST00000575397 COL13A1Q5TAT6 717 aaPredicted RBP12.61□□□□□ -0.39
RFWD3-211ENST00000575397 POLR3GLQ9BT43 218 aa12.61□□□□□ -0.39
RFWD3-211ENST00000575397 TMOD3Q9NYL9 352 aa12.61□□□□□ -0.39
RFWD3-211ENST00000575397 PPM1GO15355 546 aaPredicted RBP12.6□□□□□ -0.39
RFWD3-211ENST00000575397 FCHSD2O94868 740 aa12.6□□□□□ -0.39
RFWD3-211ENST00000575397 DPEP1P16444 411 aa12.6□□□□□ -0.39
RFWD3-211ENST00000575397 NKX1-1Q15270 411 aaPredicted RBP12.6□□□□□ -0.39
RFWD3-211ENST00000575397 C10orf71Q711Q0 1435 aa12.6□□□□□ -0.39
RFWD3-211ENST00000575397 TGFB2P61812 414 aa12.59□□□□□ -0.39
RFWD3-211ENST00000575397 ATG3Q9NT62 314 aa12.59□□□□□ -0.39
RFWD3-211ENST00000575397 SPG7Q9UQ90 795 aa12.59□□□□□ -0.39
RFWD3-211ENST00000575397 NPC1L1Q9UHC9 1359 aa12.58□□□□□ -0.4
RFWD3-211ENST00000575397 PER1O15534 1290 aaPredicted RBP12.58□□□□□ -0.4
RFWD3-211ENST00000575397 NCAPD2Q15021 1401 aa12.58□□□□□ -0.4
RFWD3-211ENST00000575397 C9orf131Q5VYM1 1079 aa12.58□□□□□ -0.4
RFWD3-211ENST00000575397 KLRG1Q96E93 195 aa12.58□□□□□ -0.4
RFWD3-211ENST00000575397 SLC4A9Q96Q91 983 aa12.58□□□□□ -0.4
RFWD3-211ENST00000575397 KCPQ6ZWJ8 1503 aa12.57□□□□□ -0.4
RFWD3-211ENST00000575397 KIF24Q5T7B8 1368 aa12.57□□□□□ -0.4
RFWD3-211ENST00000575397 C4AP0C0L4 1744 aa12.57□□□□□ -0.4
RFWD3-211ENST00000575397 PHKG2P15735 406 aa12.57□□□□□ -0.4
RFWD3-211ENST00000575397 TRAPPC3LQ5T215 181 aa12.57□□□□□ -0.4
RFWD3-211ENST00000575397 C16orf71Q8IYS4 520 aaPredicted RBP12.57□□□□□ -0.4
RFWD3-211ENST00000575397 RBM46Q8TBY0 533 aaKnown RBP12.57□□□□□ -0.4
RFWD3-211ENST00000575397 ARHGEF1Q92888 912 aaKnown RBP12.57□□□□□ -0.4
RFWD3-211ENST00000575397 EYA1Q99502 592 aa12.57□□□□□ -0.4
RFWD3-211ENST00000575397 CCDC87Q9NVE4 849 aa12.57□□□□□ -0.4
RFWD3-211ENST00000575397 RTCBQ9Y3I0 505 aaKnown RBP12.57□□□□□ -0.4
RFWD3-211ENST00000575397 BRCA1P38398 1863 aaKnown RBP12.57□□□□□ -0.4
RFWD3-211ENST00000575397 KDRP35968 1356 aa12.56□□□□□ -0.4
RFWD3-211ENST00000575397 GYS1P13807 737 aa12.56□□□□□ -0.4
RFWD3-211ENST00000575397 KCNA3P22001 575 aa12.56□□□□□ -0.4
RFWD3-211ENST00000575397 IFNL2Q8IZJ0 200 aa12.56□□□□□ -0.4
RFWD3-211ENST00000575397 NLGN1Q8N2Q7 840 aa12.56□□□□□ -0.4
RFWD3-211ENST00000575397 RBM42Q9BTD8 480 aaKnown RBP12.56□□□□□ -0.4
RFWD3-211ENST00000575397 RRAGCQ9HB90 399 aa12.55□□□□□ -0.4
RFWD3-211ENST00000575397 PARP3Q9Y6F1 533 aa12.55□□□□□ -0.4
RFWD3-211ENST00000575397 JMYQ8N9B5 988 aa12.54□□□□□ -0.4
RFWD3-211ENST00000575397 CARD14Q9BXL6 1004 aa12.54□□□□□ -0.4
RFWD3-211ENST00000575397 RNF181Q9P0P0 153 aa12.54□□□□□ -0.4
RFWD3-211ENST00000575397 COL5A3P25940 1745 aaPredicted RBP12.54□□□□□ -0.4
RFWD3-211ENST00000575397 HOXD11P31277 338 aaPredicted RBP12.53□□□□□ -0.4
RFWD3-211ENST00000575397 RFC4P35249 363 aa12.53□□□□□ -0.4
RFWD3-211ENST00000575397 TNS4Q8IZW8 715 aa12.53□□□□□ -0.4
RFWD3-211ENST00000575397 ANKRD26Q9UPS8 1709 aa12.53□□□□□ -0.4
RFWD3-211ENST00000575397 PCNTO95613 3336 aa12.53□□□□□ -0.4
RFWD3-211ENST00000575397 PLEKHG2Q9H7P9 1386 aa12.53□□□□□ -0.4
RFWD3-211ENST00000575397 ARFGEF1Q9Y6D6 1849 aa12.53□□□□□ -0.4
RFWD3-211ENST00000575397 CHRNA5P30532 468 aa12.52□□□□□ -0.41
RFWD3-211ENST00000575397 FSTL1Q12841 308 aa12.52□□□□□ -0.41
RFWD3-211ENST00000575397 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.52□□□□□ -0.41
RFWD3-211ENST00000575397 PIM2Q9P1W9 311 aa12.52□□□□□ -0.41
RFWD3-211ENST00000575397 SRP68Q9UHB9 627 aaKnown RBP12.52□□□□□ -0.41
RFWD3-211ENST00000575397 RBM19Q9Y4C8 960 aaKnown RBP12.52□□□□□ -0.41
RFWD3-211ENST00000575397 KDM2BQ8NHM5 1336 aa12.52□□□□□ -0.41
RFWD3-211ENST00000575397 FANCIQ9NVI1 1328 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms