RNA–Protein interactions for RNA: ENST00000575313.1

CLDN7-208, Transcript of claudin 7, humanhuman

TSL 3

Gene CLDN7, Length 605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-208ENST00000575313 NFE2L2Q16236 605 aa23.58■■□□□ 1.37
CLDN7-208ENST00000575313 LY75O60449 1722 aa23.58■■□□□ 1.37
CLDN7-208ENST00000575313 HMGB2P26583 209 aaKnown RBP23.57■■□□□ 1.36
CLDN7-208ENST00000575313 IL17REQ8NFR9 667 aa23.57■■□□□ 1.36
CLDN7-208ENST00000575313 RUNDC1Q96C34 613 aa23.57■■□□□ 1.36
CLDN7-208ENST00000575313 ATG3Q9NT62 314 aa23.57■■□□□ 1.36
CLDN7-208ENST00000575313 ASAP1Q9ULH1 1129 aa23.57■■□□□ 1.36
CLDN7-208ENST00000575313 CEMIPQ8WUJ3 1361 aa23.56■■□□□ 1.36
CLDN7-208ENST00000575313 TEFQ10587 303 aa23.56■■□□□ 1.36
CLDN7-208ENST00000575313 CCNL1Q9UK58 526 aaPredicted RBP23.56■■□□□ 1.36
CLDN7-208ENST00000575313 VIRMAQ69YN4 1812 aaKnown RBP23.54■■□□□ 1.36
CLDN7-208ENST00000575313 CCDC146Q8IYE0 955 aa23.54■■□□□ 1.36
CLDN7-208ENST00000575313 LRRC4BQ9NT99 713 aa23.54■■□□□ 1.36
CLDN7-208ENST00000575313 LOC102724428A0A0B4J2F2 783 aa23.51■■□□□ 1.35
CLDN7-208ENST00000575313 TMPOP42166 694 aaKnown RBP23.51■■□□□ 1.35
CLDN7-208ENST00000575313 SIK1P57059 783 aa23.51■■□□□ 1.35
CLDN7-208ENST00000575313 MCM10Q7L590 875 aa23.51■■□□□ 1.35
CLDN7-208ENST00000575313 STK32BQ9NY57 414 aa23.51■■□□□ 1.35
CLDN7-208ENST00000575313 RIPK4P57078 832 aa23.5■■□□□ 1.35
CLDN7-208ENST00000575313 LMOD3Q0VAK6 560 aa23.5■■□□□ 1.35
CLDN7-208ENST00000575313 PAPPAQ13219 1627 aa23.5■■□□□ 1.35
CLDN7-208ENST00000575313 DLG5Q8TDM6 1919 aa23.49■■□□□ 1.35
CLDN7-208ENST00000575313 KCNQ4P56696 695 aa23.48■■□□□ 1.35
CLDN7-208ENST00000575313 DCTN1Q14203 1278 aa23.48■■□□□ 1.35
CLDN7-208ENST00000575313 R3HDM1Q15032 1099 aaKnown RBP23.48■■□□□ 1.35
CLDN7-208ENST00000575313 RBM42Q9BTD8 480 aaKnown RBP23.48■■□□□ 1.35
CLDN7-208ENST00000575313 ANO8Q9HCE9 1232 aaPredicted RBP23.48■■□□□ 1.35
CLDN7-208ENST00000575313 ATP6V1AP38606 617 aa23.47■■□□□ 1.35
CLDN7-208ENST00000575313 SLC15A2Q16348 729 aa23.47■■□□□ 1.35
CLDN7-208ENST00000575313 SIPA1L3O60292 1781 aaPredicted RBP23.47■■□□□ 1.35
CLDN7-208ENST00000575313 ZNF831Q5JPB2 1677 aa23.46■■□□□ 1.35
CLDN7-208ENST00000575313 TTC5Q8N0Z6 440 aa23.46■■□□□ 1.35
CLDN7-208ENST00000575313 PSDA5PKW4 1024 aaPredicted RBP23.45■■□□□ 1.34
CLDN7-208ENST00000575313 BTBD11A6QL63 1104 aa23.45■■□□□ 1.34
CLDN7-208ENST00000575313 PTCD1O75127 700 aaKnown RBP23.45■■□□□ 1.34
CLDN7-208ENST00000575313 SLC39A6Q13433 755 aa23.45■■□□□ 1.34
CLDN7-208ENST00000575313 RRP7AQ9Y3A4 280 aaKnown RBP23.45■■□□□ 1.34
CLDN7-208ENST00000575313 C5P01031 1676 aa23.44■■□□□ 1.34
CLDN7-208ENST00000575313 NEUROD2Q15784 382 aa23.44■■□□□ 1.34
CLDN7-208ENST00000575313 AKT1S1Q96B36 256 aa23.44■■□□□ 1.34
CLDN7-208ENST00000575313 APAF1O14727 1248 aa23.43■■□□□ 1.34
CLDN7-208ENST00000575313 TAF7Q15545 349 aaPredicted RBP23.43■■□□□ 1.34
CLDN7-208ENST00000575313 ZNF790Q6PG37 636 aa23.43■■□□□ 1.34
CLDN7-208ENST00000575313 ITPK1Q13572 414 aa23.42■■□□□ 1.34
CLDN7-208ENST00000575313 ZNF827Q17R98 1081 aa23.42■■□□□ 1.34
CLDN7-208ENST00000575313 SLC4A9Q96Q91 983 aa23.42■■□□□ 1.34
CLDN7-208ENST00000575313 TAF1LQ8IZX4 1826 aa23.42■■□□□ 1.34
CLDN7-208ENST00000575313 SENP3-EIF4A1A0A087X0R7 540 aa23.41■■□□□ 1.34
CLDN7-208ENST00000575313 KCPQ6ZWJ8 1503 aa23.41■■□□□ 1.34
CLDN7-208ENST00000575313 UBR2Q8IWV8 1755 aa23.4■■□□□ 1.34
CLDN7-208ENST00000575313 VSIG10Q8N0Z9 540 aa23.4■■□□□ 1.34
CLDN7-208ENST00000575313 LINC00116Q8NCU8 138 aa23.4■■□□□ 1.34
CLDN7-208ENST00000575313 THUMPD2Q9BTF0 503 aaKnown RBP23.4■■□□□ 1.34
CLDN7-208ENST00000575313 TFCP2L1Q9NZI6 479 aa23.4■■□□□ 1.34
CLDN7-208ENST00000575313 CICQ96RK0 1608 aaPredicted RBP23.4■■□□□ 1.34
CLDN7-208ENST00000575313 C4BP0C0L5 1744 aa23.39■■□□□ 1.34
CLDN7-208ENST00000575313 HNRNPUQ00839 825 aaKnown RBP eCLIP23.39■■□□□ 1.33
CLDN7-208ENST00000575313 AK7Q96M32 723 aa23.39■■□□□ 1.33
CLDN7-208ENST00000575313 YTHDC1Q96MU7 727 aaKnown RBP23.39■■□□□ 1.33
CLDN7-208ENST00000575313 TRIM35Q9UPQ4 493 aa23.39■■□□□ 1.33
CLDN7-208ENST00000575313 FMNL2Q96PY5 1086 aa23.38■■□□□ 1.33
CLDN7-208ENST00000575313 ZNF496Q96IT1 587 aaPredicted RBP23.37■■□□□ 1.33
CLDN7-208ENST00000575313 RC3H1Q5TC82 1133 aaKnown RBP23.36■■□□□ 1.33
CLDN7-208ENST00000575313 BABAM1Q9NWV8 329 aa23.36■■□□□ 1.33
CLDN7-208ENST00000575313 SALL2Q9Y467 1007 aaPredicted RBP23.36■■□□□ 1.33
CLDN7-208ENST00000575313 HEG1Q9ULI3 1381 aa23.36■■□□□ 1.33
CLDN7-208ENST00000575313 QSER1Q2KHR3 1735 aa23.36■■□□□ 1.33
CLDN7-208ENST00000575313 CNTNAP4Q9C0A0 1308 aa23.35■■□□□ 1.33
CLDN7-208ENST00000575313 NCBP3Q53F19 620 aaKnown RBP23.35■■□□□ 1.33
CLDN7-208ENST00000575313 FLAD1Q8NFF5 587 aa23.35■■□□□ 1.33
CLDN7-208ENST00000575313 TEX13AQ9BXU3 409 aaPredicted RBP23.35■■□□□ 1.33
CLDN7-208ENST00000575313 COL5A3P25940 1745 aaPredicted RBP23.35■■□□□ 1.33
CLDN7-208ENST00000575313 TJP1Q07157 1748 aa23.35■■□□□ 1.33
CLDN7-208ENST00000575313 KCNQ3O43525 872 aa23.34■■□□□ 1.33
CLDN7-208ENST00000575313 CALD1Q05682 793 aaKnown RBP23.34■■□□□ 1.33
CLDN7-208ENST00000575313 DNAJC10Q8IXB1 793 aa23.34■■□□□ 1.33
CLDN7-208ENST00000575313 PNPLA7Q6ZV29 1317 aa23.33■■□□□ 1.33
CLDN7-208ENST00000575313 MIS18AQ9NYP9 233 aa23.33■■□□□ 1.33
CLDN7-208ENST00000575313 CASZ1Q86V15 1759 aa23.32■■□□□ 1.32
CLDN7-208ENST00000575313 GNPATO15228 680 aa23.32■■□□□ 1.32
CLDN7-208ENST00000575313 CCDC27Q2M243 656 aa23.32■■□□□ 1.32
CLDN7-208ENST00000575313 NGEFQ8N5V2 710 aa23.32■■□□□ 1.32
CLDN7-208ENST00000575313 TSPYL4Q9UJ04 414 aa23.32■■□□□ 1.32
CLDN7-208ENST00000575313 KDM3BQ7LBC6 1761 aa23.32■■□□□ 1.32
CLDN7-208ENST00000575313 STARD3NLO95772 234 aa23.31■■□□□ 1.32
CLDN7-208ENST00000575313 SSFA2P28290 1259 aa23.31■■□□□ 1.32
CLDN7-208ENST00000575313 TUBGCP6Q96RT7 1819 aa23.31■■□□□ 1.32
CLDN7-208ENST00000575313 CYP19A1P11511 503 aaPredicted RBP23.3■■□□□ 1.32
CLDN7-208ENST00000575313 CRKLP46109 303 aaKnown RBP23.3■■□□□ 1.32
CLDN7-208ENST00000575313 RTCBQ9Y3I0 505 aaKnown RBP23.3■■□□□ 1.32
CLDN7-208ENST00000575313 SNRPA1P09661 255 aaKnown RBP23.29■■□□□ 1.32
CLDN7-208ENST00000575313 UBR3Q6ZT12 1888 aa23.29■■□□□ 1.32
CLDN7-208ENST00000575313 SLC16A10Q8TF71 515 aa23.29■■□□□ 1.32
CLDN7-208ENST00000575313 PDGFDQ9GZP0 370 aaPredicted RBP23.29■■□□□ 1.32
CLDN7-208ENST00000575313 CCDC87Q9NVE4 849 aa23.29■■□□□ 1.32
CLDN7-208ENST00000575313 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.28■■□□□ 1.32
CLDN7-208ENST00000575313 CHL1O00533 1208 aa23.28■■□□□ 1.32
CLDN7-208ENST00000575313 RPS6KA4O75676 772 aa23.28■■□□□ 1.32
CLDN7-208ENST00000575313 MSH5O43196 834 aa23.27■■□□□ 1.32
CLDN7-208ENST00000575313 ADRA2BP18089 450 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms