RNA–Protein interactions for RNA: ENST00000572875.1

SGSM2-205, Transcript of small G protein signaling modulator 2, human

TSL 3

Gene SGSM2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGSM2-205	ENST00000572875	UTRN	P46939	3433 aa		32.32	■■■□□ 2.76
SGSM2-205	ENST00000572875	NFATC2IP	Q8NCF5	419 aa		32.3	■■■□□ 2.76
SGSM2-205	ENST00000572875	ARX	Q96QS3	562 aa		32.3	■■■□□ 2.76
SGSM2-205	ENST00000572875	NUDC	Q9Y266	331 aa		32.3	■■■□□ 2.76
SGSM2-205	ENST00000572875	LOC102724428	A0A0B4J2F2	783 aa		32.29	■■■□□ 2.76
SGSM2-205	ENST00000572875	SIK1	P57059	783 aa		32.29	■■■□□ 2.76
SGSM2-205	ENST00000572875	RSPH6A	Q9H0K4	717 aa		32.28	■■■□□ 2.76
SGSM2-205	ENST00000572875	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.27	■■■□□ 2.76
SGSM2-205	ENST00000572875	YY1	P25490	414 aa		32.27	■■■□□ 2.76
SGSM2-205	ENST00000572875	PRKAR2B	P31323	418 aa		32.27	■■■□□ 2.76
SGSM2-205	ENST00000572875	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.27	■■■□□ 2.76
SGSM2-205	ENST00000572875	PHACTR3	Q96KR7	559 aa		32.27	■■■□□ 2.76
SGSM2-205	ENST00000572875	C4B	P0C0L5	1744 aa		32.26	■■■□□ 2.76
SGSM2-205	ENST00000572875	RNMT	O43148	476 aa	Known RBP	32.26	■■■□□ 2.75
SGSM2-205	ENST00000572875	SLC16A10	Q8TF71	515 aa		32.26	■■■□□ 2.75
SGSM2-205	ENST00000572875	DCAF8L1	A6NGE4	600 aa		32.24	■■■□□ 2.75
SGSM2-205	ENST00000572875	ATP6V1A	P38606	617 aa		32.24	■■■□□ 2.75
SGSM2-205	ENST00000572875	ITPK1	Q13572	414 aa		32.24	■■■□□ 2.75
SGSM2-205	ENST00000572875	RALBP1	Q15311	655 aa		32.24	■■■□□ 2.75
SGSM2-205	ENST00000572875	SLC4A9	Q96Q91	983 aa		32.24	■■■□□ 2.75
SGSM2-205	ENST00000572875	ADAMTS7	Q9UKP4	1686 aa		32.24	■■■□□ 2.75
SGSM2-205	ENST00000572875	COL23A1	Q86Y22	540 aa	Predicted RBP	32.23	■■■□□ 2.75
SGSM2-205	ENST00000572875	LINC00116	Q8NCU8	138 aa		32.23	■■■□□ 2.75
SGSM2-205	ENST00000572875	RBM42	Q9BTD8	480 aa	Known RBP	32.23	■■■□□ 2.75
SGSM2-205	ENST00000572875	SLC52A2	Q9HAB3	445 aa		32.22	■■■□□ 2.75
SGSM2-205	ENST00000572875	MAP3K5	Q99683	1374 aa		32.2	■■■□□ 2.75
SGSM2-205	ENST00000572875	SMIM5	Q71RC9	77 aa		32.2	■■■□□ 2.75
SGSM2-205	ENST00000572875	GAS2L2	Q8NHY3	880 aa		32.2	■■■□□ 2.75
SGSM2-205	ENST00000572875	UBR3	Q6ZT12	1888 aa		32.19	■■■□□ 2.74
SGSM2-205	ENST00000572875	FCHSD2	O94868	740 aa		32.19	■■■□□ 2.74
SGSM2-205	ENST00000572875	AMIGO3	Q86WK7	504 aa		32.19	■■■□□ 2.74
SGSM2-205	ENST00000572875	MRC1	P22897	1456 aa		32.17	■■■□□ 2.74
SGSM2-205	ENST00000572875	PTCD1	O75127	700 aa	Known RBP	32.17	■■■□□ 2.74
SGSM2-205	ENST00000572875	IL17RE	Q8NFR9	667 aa		32.17	■■■□□ 2.74
SGSM2-205	ENST00000572875	ZNF831	Q5JPB2	1677 aa		32.17	■■■□□ 2.74
SGSM2-205	ENST00000572875	GNAT3	A8MTJ3	354 aa		32.16	■■■□□ 2.74
SGSM2-205	ENST00000572875	MSH5	O43196	834 aa		32.16	■■■□□ 2.74
SGSM2-205	ENST00000572875	POLD1	P28340	1107 aa		32.16	■■■□□ 2.74
SGSM2-205	ENST00000572875	AK7	Q96M32	723 aa		32.16	■■■□□ 2.74
SGSM2-205	ENST00000572875	HMGB2	P26583	209 aa	Known RBP	32.15	■■■□□ 2.74
SGSM2-205	ENST00000572875	KLHL34	Q8N239	644 aa		32.15	■■■□□ 2.74
SGSM2-205	ENST00000572875	COL5A3	P25940	1745 aa	Predicted RBP	32.14	■■■□□ 2.74
SGSM2-205	ENST00000572875	SLC39A6	Q13433	755 aa		32.14	■■■□□ 2.74
SGSM2-205	ENST00000572875	GOLGB1	Q14789	3259 aa	Known RBP	32.14	■■■□□ 2.74
SGSM2-205	ENST00000572875	MSL1	Q68DK7	614 aa		32.13	■■■□□ 2.73
SGSM2-205	ENST00000572875	MYBBP1A	Q9BQG0	1328 aa	Known RBP	32.11	■■■□□ 2.73
SGSM2-205	ENST00000572875	PHF14	O94880	888 aa		32.11	■■■□□ 2.73
SGSM2-205	ENST00000572875	SIPA1L3	O60292	1781 aa	Predicted RBP	32.11	■■■□□ 2.73
SGSM2-205	ENST00000572875	CHD4	Q14839	1912 aa		32.1	■■■□□ 2.73
SGSM2-205	ENST00000572875	TJP1	Q07157	1748 aa		32.09	■■■□□ 2.73
SGSM2-205	ENST00000572875	MYH14	Q7Z406	1995 aa	Known RBP	32.09	■■■□□ 2.73
SGSM2-205	ENST00000572875	GNPAT	O15228	680 aa		32.08	■■■□□ 2.73
SGSM2-205	ENST00000572875	FLAD1	Q8NFF5	587 aa		32.08	■■■□□ 2.73
SGSM2-205	ENST00000572875	NLGN2	Q8NFZ4	835 aa		32.08	■■■□□ 2.73
SGSM2-205	ENST00000572875	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	32.07	■■■□□ 2.72
SGSM2-205	ENST00000572875	ZNF316	A6NFI3	1004 aa	Predicted RBP	32.07	■■■□□ 2.72
SGSM2-205	ENST00000572875	PRKRIP1	Q9H875	184 aa	Predicted RBP	32.07	■■■□□ 2.72
SGSM2-205	ENST00000572875	DLG5	Q8TDM6	1919 aa		32.06	■■■□□ 2.72
SGSM2-205	ENST00000572875	PLEKHF1	Q96S99	279 aa		32.06	■■■□□ 2.72
SGSM2-205	ENST00000572875	TEF	Q10587	303 aa		32.05	■■■□□ 2.72
SGSM2-205	ENST00000572875	CEMIP	Q8WUJ3	1361 aa		32.05	■■■□□ 2.72
SGSM2-205	ENST00000572875	KCP	Q6ZWJ8	1503 aa		32.05	■■■□□ 2.72
SGSM2-205	ENST00000572875	SSFA2	P28290	1259 aa		32.04	■■■□□ 2.72
SGSM2-205	ENST00000572875	UBR2	Q8IWV8	1755 aa		32.04	■■■□□ 2.72
SGSM2-205	ENST00000572875	RC3H1	Q5TC82	1133 aa	Known RBP	32.03	■■■□□ 2.72
SGSM2-205	ENST00000572875	MCM10	Q7L590	875 aa		32.03	■■■□□ 2.72
SGSM2-205	ENST00000572875	CIC	Q96RK0	1608 aa	Predicted RBP	32.03	■■■□□ 2.72
SGSM2-205	ENST00000572875	DCTN1	Q14203	1278 aa		32.02	■■■□□ 2.72
SGSM2-205	ENST00000572875	CNTNAP4	Q9C0A0	1308 aa		32.01	■■■□□ 2.72
SGSM2-205	ENST00000572875	DNAJC10	Q8IXB1	793 aa		32.01	■■■□□ 2.71
SGSM2-205	ENST00000572875	RTCB	Q9Y3I0	505 aa	Known RBP	32	■■■□□ 2.71
SGSM2-205	ENST00000572875	CRKL	P46109	303 aa	Known RBP	31.99	■■■□□ 2.71
SGSM2-205	ENST00000572875	GPR162	Q16538	588 aa		31.99	■■■□□ 2.71
SGSM2-205	ENST00000572875	RTF1	Q92541	710 aa	Known RBP	31.99	■■■□□ 2.71
SGSM2-205	ENST00000572875	RPS6KA4	O75676	772 aa		31.97	■■■□□ 2.71
SGSM2-205	ENST00000572875	NEFM	P07197	916 aa		31.97	■■■□□ 2.71
SGSM2-205	ENST00000572875	ZNF790	Q6PG37	636 aa		31.97	■■■□□ 2.71
SGSM2-205	ENST00000572875	TRAPPC3L	Q5T215	181 aa		31.96	■■■□□ 2.71
SGSM2-205	ENST00000572875	PELP1	Q8IZL8	1130 aa	Known RBP	31.96	■■■□□ 2.71
SGSM2-205	ENST00000572875	TTC5	Q8N0Z6	440 aa		31.96	■■■□□ 2.71
SGSM2-205	ENST00000572875	KCNQ3	O43525	872 aa		31.95	■■■□□ 2.71
SGSM2-205	ENST00000572875	HTATSF1	O43719	755 aa	Known RBP	31.95	■■■□□ 2.71
SGSM2-205	ENST00000572875	INTS5	Q6P9B9	1019 aa	Known RBP	31.95	■■■□□ 2.71
SGSM2-205	ENST00000572875	ARHGEF1	Q92888	912 aa	Known RBP	31.95	■■■□□ 2.71
SGSM2-205	ENST00000572875	ZNF496	Q96IT1	587 aa	Predicted RBP	31.95	■■■□□ 2.71
SGSM2-205	ENST00000572875	PNN	Q9H307	717 aa	Known RBP	31.94	■■■□□ 2.7
SGSM2-205	ENST00000572875	C4A	P0C0L4	1744 aa		31.93	■■■□□ 2.7
SGSM2-205	ENST00000572875	BTBD11	A6QL63	1104 aa		31.93	■■■□□ 2.7
SGSM2-205	ENST00000572875	CYP19A1	P11511	503 aa	Predicted RBP	31.93	■■■□□ 2.7
SGSM2-205	ENST00000572875	NFE2L2	Q16236	605 aa		31.93	■■■□□ 2.7
SGSM2-205	ENST00000572875	ZNF784	Q8NCA9	323 aa	Predicted RBP	31.93	■■■□□ 2.7
SGSM2-205	ENST00000572875	VSIG10	Q8N0Z9	540 aa		31.92	■■■□□ 2.7
SGSM2-205	ENST00000572875	MAPK8IP3	Q9UPT6	1336 aa		31.92	■■■□□ 2.7
SGSM2-205	ENST00000572875	YBX3	P16989	372 aa	Known RBP eCLIP	31.91	■■■□□ 2.7
SGSM2-205	ENST00000572875	CCDC87	Q9NVE4	849 aa		31.89	■■■□□ 2.7
SGSM2-205	ENST00000572875	HEG1	Q9ULI3	1381 aa		31.89	■■■□□ 2.7
SGSM2-205	ENST00000572875	ADRA2B	P18089	450 aa		31.88	■■■□□ 2.69
SGSM2-205	ENST00000572875	CCDC146	Q8IYE0	955 aa		31.88	■■■□□ 2.69
SGSM2-205	ENST00000572875	RFC4	P35249	363 aa		31.87	■■■□□ 2.69
SGSM2-205	ENST00000572875	THUMPD2	Q9BTF0	503 aa	Known RBP	31.87	■■■□□ 2.69

Retrieved 100 of 20,778 RNA–protein pairs in 56 ms