RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 FBLN1P23142 703 aa20.3■□□□□ 0.84
LITAF-209ENST00000571688 SSH2Q76I76 1423 aa20.3■□□□□ 0.84
LITAF-209ENST00000571688 MINK1Q8N4C8 1332 aaPredicted RBP20.3■□□□□ 0.84
LITAF-209ENST00000571688 NOL8Q76FK4 1167 aaKnown RBP20.3■□□□□ 0.84
LITAF-209ENST00000571688 KLHL34Q8N239 644 aa20.3■□□□□ 0.84
LITAF-209ENST00000571688 MEIS3Q99687 375 aa20.3■□□□□ 0.84
LITAF-209ENST00000571688 SPDYE4A6NLX3 237 aa20.29■□□□□ 0.84
LITAF-209ENST00000571688 IL13P35225 146 aa20.29■□□□□ 0.84
LITAF-209ENST00000571688 KCNF1Q9H3M0 494 aa20.29■□□□□ 0.84
LITAF-209ENST00000571688 STK26Q9P289 416 aa20.29■□□□□ 0.84
LITAF-209ENST00000571688 FUCA2Q9BTY2 467 aa20.29■□□□□ 0.84
LITAF-209ENST00000571688 SRCIN1Q9C0H9 1055 aa20.29■□□□□ 0.84
LITAF-209ENST00000571688 SALL3Q9BXA9 1300 aa20.28■□□□□ 0.84
LITAF-209ENST00000571688 CHAF1AQ13111 956 aaPredicted RBP20.28■□□□□ 0.84
LITAF-209ENST00000571688 KRT24Q2M2I5 525 aa20.28■□□□□ 0.84
LITAF-209ENST00000571688 PYCARDQ9ULZ3 195 aa20.28■□□□□ 0.84
LITAF-209ENST00000571688 TPM3P06753 285 aa20.27■□□□□ 0.84
LITAF-209ENST00000571688 U2AF2P26368 475 aaKnown RBP eCLIP20.27■□□□□ 0.84
LITAF-209ENST00000571688 KIAA0232Q92628 1395 aa20.27■□□□□ 0.84
LITAF-209ENST00000571688 FAM83GA6ND36 823 aa20.27■□□□□ 0.84
LITAF-209ENST00000571688 HMMRO75330 724 aa20.27■□□□□ 0.84
LITAF-209ENST00000571688 FGD1P98174 961 aa20.27■□□□□ 0.84
LITAF-209ENST00000571688 CDK12Q9NYV4 1490 aaPredicted RBP20.27■□□□□ 0.83
LITAF-209ENST00000571688 UBE2HP62256 183 aa20.26■□□□□ 0.83
LITAF-209ENST00000571688 PTPRCP08575 1304 aa20.26■□□□□ 0.83
LITAF-209ENST00000571688 FEZ1Q99689 392 aa20.26■□□□□ 0.83
LITAF-209ENST00000571688 CNPY2Q9Y2B0 182 aa20.26■□□□□ 0.83
LITAF-209ENST00000571688 AP5Z1O43299 807 aa20.25■□□□□ 0.83
LITAF-209ENST00000571688 PRAM1Q96QH2 718 aa20.25■□□□□ 0.83
LITAF-209ENST00000571688 CABP1Q9NZU7 370 aa20.25■□□□□ 0.83
LITAF-209ENST00000571688 CHMLP26374 656 aa20.24■□□□□ 0.83
LITAF-209ENST00000571688 HAP1P54257 671 aaPredicted RBP20.24■□□□□ 0.83
LITAF-209ENST00000571688 UPF3BQ9BZI7 483 aaKnown RBP20.24■□□□□ 0.83
LITAF-209ENST00000571688 ANO2Q9NQ90 1003 aa20.24■□□□□ 0.83
LITAF-209ENST00000571688 EMILIN1Q9Y6C2 1016 aa20.24■□□□□ 0.83
LITAF-209ENST00000571688 DCTN1Q14203 1278 aa20.23■□□□□ 0.83
LITAF-209ENST00000571688 GGT6Q6P531 493 aa20.23■□□□□ 0.83
LITAF-209ENST00000571688 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.23■□□□□ 0.83
LITAF-209ENST00000571688 ZSCAN22P10073 491 aaPredicted RBP20.23■□□□□ 0.83
LITAF-209ENST00000571688 CDK19Q9BWU1 502 aa20.23■□□□□ 0.83
LITAF-209ENST00000571688 TSHZ3Q63HK5 1081 aa20.22■□□□□ 0.83
LITAF-209ENST00000571688 ATP7BP35670 1465 aa20.22■□□□□ 0.83
LITAF-209ENST00000571688 SYCP1Q15431 976 aa20.22■□□□□ 0.83
LITAF-209ENST00000571688 OGFRQ9NZT2 677 aa20.22■□□□□ 0.83
LITAF-209ENST00000571688 EPB41L2O43491 1005 aaKnown RBP20.21■□□□□ 0.83
LITAF-209ENST00000571688 TAF3Q5VWG9 929 aa20.21■□□□□ 0.83
LITAF-209ENST00000571688 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.21■□□□□ 0.83
LITAF-209ENST00000571688 GOLGA6L6A8MZA4 724 aa20.2■□□□□ 0.82
LITAF-209ENST00000571688 PLCB2Q00722 1185 aa20.2■□□□□ 0.82
LITAF-209ENST00000571688 GIMAP6Q6P9H5 292 aa20.2■□□□□ 0.82
LITAF-209ENST00000571688 NCBP1Q09161 790 aaKnown RBP20.2■□□□□ 0.82
LITAF-209ENST00000571688 MYO5BQ9ULV0 1848 aa20.19■□□□□ 0.82
LITAF-209ENST00000571688 POGZQ7Z3K3 1410 aa20.19■□□□□ 0.82
LITAF-209ENST00000571688 HSPA4P34932 840 aa20.18■□□□□ 0.82
LITAF-209ENST00000571688 STX6O43752 255 aa20.18■□□□□ 0.82
LITAF-209ENST00000571688 F13A1P00488 732 aa20.18■□□□□ 0.82
LITAF-209ENST00000571688 SPC24Q8NBT2 197 aa20.18■□□□□ 0.82
LITAF-209ENST00000571688 EXOC6BQ9Y2D4 811 aa20.18■□□□□ 0.82
LITAF-209ENST00000571688 CHL1O00533 1208 aa20.17■□□□□ 0.82
LITAF-209ENST00000571688 RILPL2Q969X0 211 aa20.17■□□□□ 0.82
LITAF-209ENST00000571688 AATKQ6ZMQ8 1374 aa20.17■□□□□ 0.82
LITAF-209ENST00000571688 SYT1P21579 422 aa20.17■□□□□ 0.82
LITAF-209ENST00000571688 LRRCC1Q9C099 1032 aa20.17■□□□□ 0.82
LITAF-209ENST00000571688 CTNNA3Q9UI47 895 aa20.17■□□□□ 0.82
LITAF-209ENST00000571688 FIBPO43427 364 aa20.16■□□□□ 0.82
LITAF-209ENST00000571688 IGSF3O75054 1194 aa20.16■□□□□ 0.82
LITAF-209ENST00000571688 STAP2Q9UGK3 403 aa20.16■□□□□ 0.82
LITAF-209ENST00000571688 TRIM6-TRIM34B2RNG4 842 aa20.16■□□□□ 0.82
LITAF-209ENST00000571688 GABPB1Q06547 395 aaPredicted RBP20.16■□□□□ 0.82
LITAF-209ENST00000571688 ATP6V1DQ9Y5K8 247 aa20.16■□□□□ 0.82
LITAF-209ENST00000571688 PREX1Q8TCU6 1659 aa20.15■□□□□ 0.82
LITAF-209ENST00000571688 TPRNQ4KMQ1 711 aa20.15■□□□□ 0.82
LITAF-209ENST00000571688 TTC14Q96N46 770 aa20.15■□□□□ 0.82
LITAF-209ENST00000571688 IL25Q9H293 177 aa20.15■□□□□ 0.82
LITAF-209ENST00000571688 MLH3Q9UHC1 1453 aa20.14■□□□□ 0.82
LITAF-209ENST00000571688 SMTNL1A8MU46 457 aa20.14■□□□□ 0.81
LITAF-209ENST00000571688 UNC5CLQ8IV45 518 aa20.14■□□□□ 0.81
LITAF-209ENST00000571688 PTGS1P23219 599 aa20.13■□□□□ 0.81
LITAF-209ENST00000571688 CCT4P50991 539 aaKnown RBP20.13■□□□□ 0.81
LITAF-209ENST00000571688 IDI1Q13907 227 aa20.13■□□□□ 0.81
LITAF-209ENST00000571688 ZNF771Q7L3S4 317 aaPredicted RBP20.13■□□□□ 0.81
LITAF-209ENST00000571688 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.13■□□□□ 0.81
LITAF-209ENST00000571688 GNAI2P04899 355 aa20.13■□□□□ 0.81
LITAF-209ENST00000571688 CCDC192P0DO97 292 aa20.13■□□□□ 0.81
LITAF-209ENST00000571688 GTF2E1P29083 439 aaPredicted RBP20.13■□□□□ 0.81
LITAF-209ENST00000571688 SLC4A2P04920 1241 aa20.12■□□□□ 0.81
LITAF-209ENST00000571688 SENP3Q9H4L4 574 aaPredicted RBP20.12■□□□□ 0.81
LITAF-209ENST00000571688 DDX41Q9UJV9 622 aaKnown RBP20.12■□□□□ 0.81
LITAF-209ENST00000571688 EDC4Q6P2E9 1401 aaKnown RBP20.12■□□□□ 0.81
LITAF-209ENST00000571688 BBXQ8WY36 941 aaPredicted RBP20.12■□□□□ 0.81
LITAF-209ENST00000571688 CGNQ9P2M7 1197 aaKnown RBP20.12■□□□□ 0.81
LITAF-209ENST00000571688 AOX1Q06278 1338 aa20.12■□□□□ 0.81
LITAF-209ENST00000571688 FAM200AQ8TCP9 573 aa20.11■□□□□ 0.81
LITAF-209ENST00000571688 AK2P54819 239 aa20.11■□□□□ 0.81
LITAF-209ENST00000571688 RAD50Q92878 1312 aa20.11■□□□□ 0.81
LITAF-209ENST00000571688 TMEM131LA2VDJ0 1609 aa20.11■□□□□ 0.81
LITAF-209ENST00000571688 NRKQ7Z2Y5 1582 aa20.1■□□□□ 0.81
LITAF-209ENST00000571688 LIMCH1Q9UPQ0 1083 aa20.1■□□□□ 0.81
LITAF-209ENST00000571688 SMC3Q9UQE7 1217 aa20.1■□□□□ 0.81
LITAF-209ENST00000571688 SNX14Q9Y5W7 946 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms