RNA–Protein interactions for RNA: ENST00000569446.2

SCRT1-201, Transcript of scratch family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRT1, Length 3,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1-201ENST00000569446 CNTROBQ8N137 903 aa24.64■■□□□ 1.53
SCRT1-201ENST00000569446 KIF2CQ99661 725 aa24.64■■□□□ 1.53
SCRT1-201ENST00000569446 FSD1Q9BTV5 496 aa24.64■■□□□ 1.53
SCRT1-201ENST00000569446 BOLA2Q9H3K6 86 aa24.64■■□□□ 1.53
SCRT1-201ENST00000569446 TULP4Q9NRJ4 1543 aa24.63■■□□□ 1.53
SCRT1-201ENST00000569446 DNAJC2Q99543 621 aaKnown RBP24.63■■□□□ 1.53
SCRT1-201ENST00000569446 CWC22Q9HCG8 908 aaKnown RBP24.63■■□□□ 1.53
SCRT1-201ENST00000569446 PTPRCP08575 1304 aa24.63■■□□□ 1.53
SCRT1-201ENST00000569446 ZKSCAN1P17029 563 aaPredicted RBP24.63■■□□□ 1.53
SCRT1-201ENST00000569446 ESYT1Q9BSJ8 1104 aa24.63■■□□□ 1.53
SCRT1-201ENST00000569446 NEUROD6Q96NK8 337 aa24.62■■□□□ 1.53
SCRT1-201ENST00000569446 LGR6Q9HBX8 967 aa24.62■■□□□ 1.53
SCRT1-201ENST00000569446 KCNQ3O43525 872 aa24.62■■□□□ 1.53
SCRT1-201ENST00000569446 NECAB1Q8N987 351 aa24.62■■□□□ 1.53
SCRT1-201ENST00000569446 CCDC85AQ96PX6 553 aaPredicted RBP24.61■■□□□ 1.53
SCRT1-201ENST00000569446 RBSNQ9H1K0 784 aa24.61■■□□□ 1.53
SCRT1-201ENST00000569446 IQGAP1P46940 1657 aa24.61■■□□□ 1.53
SCRT1-201ENST00000569446 CEP152O94986 1710 aa24.61■■□□□ 1.53
SCRT1-201ENST00000569446 CWF19L2Q2TBE0 894 aaKnown RBP24.61■■□□□ 1.53
SCRT1-201ENST00000569446 NBPF7P0C2Y1 421 aaPredicted RBP24.6■■□□□ 1.53
SCRT1-201ENST00000569446 CAMK4Q16566 473 aa24.6■■□□□ 1.53
SCRT1-201ENST00000569446 PPRC1Q5VV67 1664 aaKnown RBP24.6■■□□□ 1.53
SCRT1-201ENST00000569446 SLC39A6Q13433 755 aa24.6■■□□□ 1.53
SCRT1-201ENST00000569446 ZNF853P0CG23 659 aa24.59■■□□□ 1.53
SCRT1-201ENST00000569446 ZMYM3Q14202 1370 aa24.59■■□□□ 1.53
SCRT1-201ENST00000569446 USP25Q9UHP3 1055 aa24.58■■□□□ 1.53
SCRT1-201ENST00000569446 ABCC3O15438 1527 aa24.58■■□□□ 1.53
SCRT1-201ENST00000569446 TSPY26PQ9H489 355 aa24.58■■□□□ 1.53
SCRT1-201ENST00000569446 RTL1A6NKG5 1358 aa24.58■■□□□ 1.52
SCRT1-201ENST00000569446 KCNA6P17658 529 aa24.57■■□□□ 1.52
SCRT1-201ENST00000569446 ZSCAN30Q86W11 494 aa24.57■■□□□ 1.52
SCRT1-201ENST00000569446 KLHDC4Q8TBB5 520 aa24.57■■□□□ 1.52
SCRT1-201ENST00000569446 CLCN1P35523 988 aa24.57■■□□□ 1.52
SCRT1-201ENST00000569446 RHPN1Q8TCX5 695 aa24.57■■□□□ 1.52
SCRT1-201ENST00000569446 ZFYVE9O95405 1425 aa24.57■■□□□ 1.52
SCRT1-201ENST00000569446 LAMC1P11047 1609 aa24.56■■□□□ 1.52
SCRT1-201ENST00000569446 NSFL1CQ9UNZ2 370 aaKnown RBP24.56■■□□□ 1.52
SCRT1-201ENST00000569446 CHMLP26374 656 aa24.56■■□□□ 1.52
SCRT1-201ENST00000569446 DNAAF4Q8WXU2 420 aa24.56■■□□□ 1.52
SCRT1-201ENST00000569446 NDUFB9Q9Y6M9 179 aa24.56■■□□□ 1.52
SCRT1-201ENST00000569446 GLI2P10070 1586 aa24.56■■□□□ 1.52
SCRT1-201ENST00000569446 FSD2A1L4K1 749 aa24.55■■□□□ 1.52
SCRT1-201ENST00000569446 DDX11Q96FC9 970 aa24.55■■□□□ 1.52
SCRT1-201ENST00000569446 ERBB4Q15303 1308 aa24.55■■□□□ 1.52
SCRT1-201ENST00000569446 NEXNQ0ZGT2 675 aa24.55■■□□□ 1.52
SCRT1-201ENST00000569446 GORABQ5T7V8 394 aa24.55■■□□□ 1.52
SCRT1-201ENST00000569446 RUFY2Q8WXA3 655 aa24.55■■□□□ 1.52
SCRT1-201ENST00000569446 CNPY2Q9Y2B0 182 aa24.55■■□□□ 1.52
SCRT1-201ENST00000569446 TFIP11Q9UBB9 837 aaKnown RBP24.55■■□□□ 1.52
SCRT1-201ENST00000569446 MAP3K2Q9Y2U5 619 aa24.55■■□□□ 1.52
SCRT1-201ENST00000569446 FAM173BQ6P4H8 233 aa24.54■■□□□ 1.52
SCRT1-201ENST00000569446 BICD2Q8TD16 824 aa24.54■■□□□ 1.52
SCRT1-201ENST00000569446 EDC4Q6P2E9 1401 aaKnown RBP24.54■■□□□ 1.52
SCRT1-201ENST00000569446 H3BQV1 296 aa24.54■■□□□ 1.52
SCRT1-201ENST00000569446 IFFO2Q5TF58 517 aa24.54■■□□□ 1.52
SCRT1-201ENST00000569446 IL17REQ8NFR9 667 aa24.54■■□□□ 1.52
SCRT1-201ENST00000569446 QRICH2Q9H0J4 1663 aa24.54■■□□□ 1.52
SCRT1-201ENST00000569446 ATP8B2P98198 1209 aa24.54■■□□□ 1.52
SCRT1-201ENST00000569446 ZRSR1Q15695 479 aaKnown RBP24.54■■□□□ 1.52
SCRT1-201ENST00000569446 GADD45BO75293 160 aaPredicted RBP24.53■■□□□ 1.52
SCRT1-201ENST00000569446 PHF14O94880 888 aa24.53■■□□□ 1.52
SCRT1-201ENST00000569446 MBD3O95983 291 aa24.53■■□□□ 1.52
SCRT1-201ENST00000569446 HCLS1P14317 486 aaPredicted RBP24.53■■□□□ 1.52
SCRT1-201ENST00000569446 KIF1BPQ96EK5 621 aa24.53■■□□□ 1.52
SCRT1-201ENST00000569446 LMBRD1Q9NUN5 540 aa24.53■■□□□ 1.52
SCRT1-201ENST00000569446 TMEM63CQ9P1W3 806 aa24.53■■□□□ 1.52
SCRT1-201ENST00000569446 RAPGEF4Q8WZA2 1011 aa24.52■■□□□ 1.52
SCRT1-201ENST00000569446 THEMISQ8N1K5 641 aaPredicted RBP24.52■■□□□ 1.52
SCRT1-201ENST00000569446 TTC5Q8N0Z6 440 aa24.51■■□□□ 1.51
SCRT1-201ENST00000569446 PDRG1Q9NUG6 133 aa24.51■■□□□ 1.51
SCRT1-201ENST00000569446 TNRQ92752 1358 aa24.51■■□□□ 1.51
SCRT1-201ENST00000569446 ATP5J2-PTCD1G3V325 749 aa24.51■■□□□ 1.51
SCRT1-201ENST00000569446 PTCD1O75127 700 aaKnown RBP24.51■■□□□ 1.51
SCRT1-201ENST00000569446 GIMAP6Q6P9H5 292 aa24.51■■□□□ 1.51
SCRT1-201ENST00000569446 USP48Q86UV5 1035 aa24.51■■□□□ 1.51
SCRT1-201ENST00000569446 PHF8Q9UPP1 1060 aa24.51■■□□□ 1.51
SCRT1-201ENST00000569446 IQSEC2Q5JU85 1478 aa24.51■■□□□ 1.51
SCRT1-201ENST00000569446 MLH3Q9UHC1 1453 aa24.51■■□□□ 1.51
SCRT1-201ENST00000569446 FAM184AQ8NB25 1140 aa24.5■■□□□ 1.51
SCRT1-201ENST00000569446 LRRC2Q9BYS8 371 aa24.5■■□□□ 1.51
SCRT1-201ENST00000569446 ADGRB3O60242 1522 aa24.5■■□□□ 1.51
SCRT1-201ENST00000569446 FAM135BQ49AJ0 1406 aa24.5■■□□□ 1.51
SCRT1-201ENST00000569446 WDR33Q9C0J8 1336 aaKnown RBP24.5■■□□□ 1.51
SCRT1-201ENST00000569446 ROBO2Q9HCK4 1378 aa24.5■■□□□ 1.51
SCRT1-201ENST00000569446 PLEKHO1Q53GL0 409 aaPredicted RBP24.5■■□□□ 1.51
SCRT1-201ENST00000569446 LARP1BQ659C4 914 aaKnown RBP24.5■■□□□ 1.51
SCRT1-201ENST00000569446 FAM177BA6PVY3 158 aa24.5■■□□□ 1.51
SCRT1-201ENST00000569446 USP44Q9H0E7 712 aa24.5■■□□□ 1.51
SCRT1-201ENST00000569446 MCM2P49736 904 aa24.49■■□□□ 1.51
SCRT1-201ENST00000569446 ZNF592Q92610 1267 aa24.49■■□□□ 1.51
SCRT1-201ENST00000569446 CYP46A1Q9Y6A2 500 aa24.49■■□□□ 1.51
SCRT1-201ENST00000569446 HOXC9P31274 260 aa24.49■■□□□ 1.51
SCRT1-201ENST00000569446 CKAP2LQ8IYA6 745 aa24.49■■□□□ 1.51
SCRT1-201ENST00000569446 GPT2Q8TD30 523 aa24.49■■□□□ 1.51
SCRT1-201ENST00000569446 C17orf53Q8N3J3 647 aaPredicted RBP24.48■■□□□ 1.51
SCRT1-201ENST00000569446 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.48■■□□□ 1.51
SCRT1-201ENST00000569446 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.47■■□□□ 1.51
SCRT1-201ENST00000569446 PRAMEF22A3QJZ6 481 aa24.47■■□□□ 1.51
SCRT1-201ENST00000569446 RAB11FIP3O75154 756 aa24.47■■□□□ 1.51
SCRT1-201ENST00000569446 DDX58O95786 925 aaKnown RBP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms