RNA–Protein interactions for RNA: ENST00000568903.5

TNRC6A-215, Transcript of trinucleotide repeat containing 6A, human

TSL 2

Gene TNRC6A, Length 943 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNRC6A-215	ENST00000568903	TNNT2	P45379	298 aa	Predicted RBP	13.61	□□□□□ -0.23
TNRC6A-215	ENST00000568903	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.61	□□□□□ -0.23
TNRC6A-215	ENST00000568903	CDCA8	Q53HL2	280 aa		13.6	□□□□□ -0.23
TNRC6A-215	ENST00000568903	SMG6	Q86US8	1419 aa	Known RBP	13.6	□□□□□ -0.23
TNRC6A-215	ENST00000568903	TOGARAM1	Q9Y4F4	1720 aa		13.59	□□□□□ -0.23
TNRC6A-215	ENST00000568903	PELP1	Q8IZL8	1130 aa	Known RBP	13.59	□□□□□ -0.23
TNRC6A-215	ENST00000568903	SLC16A10	Q8TF71	515 aa		13.59	□□□□□ -0.23
TNRC6A-215	ENST00000568903	EYA1	Q99502	592 aa		13.59	□□□□□ -0.23
TNRC6A-215	ENST00000568903	POLK	Q9UBT6	870 aa		13.59	□□□□□ -0.23
TNRC6A-215	ENST00000568903	CGNL1	Q0VF96	1302 aa		13.59	□□□□□ -0.23
TNRC6A-215	ENST00000568903	PCDH11X	Q9BZA7	1347 aa		13.59	□□□□□ -0.23
TNRC6A-215	ENST00000568903	PCDH11Y	Q9BZA8	1340 aa		13.59	□□□□□ -0.23
TNRC6A-215	ENST00000568903	MAP3K5	Q99683	1374 aa		13.58	□□□□□ -0.23
TNRC6A-215	ENST00000568903	POLD1	P28340	1107 aa		13.58	□□□□□ -0.24
TNRC6A-215	ENST00000568903	GPR162	Q16538	588 aa		13.58	□□□□□ -0.24
TNRC6A-215	ENST00000568903	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.58	□□□□□ -0.24
TNRC6A-215	ENST00000568903	PIGB	Q92521	554 aa		13.58	□□□□□ -0.24
TNRC6A-215	ENST00000568903	QSER1	Q2KHR3	1735 aa		13.58	□□□□□ -0.24
TNRC6A-215	ENST00000568903	PALLD	Q8WX93	1383 aa		13.58	□□□□□ -0.24
TNRC6A-215	ENST00000568903	COL24A1	Q17RW2	1714 aa		13.57	□□□□□ -0.24
TNRC6A-215	ENST00000568903	HS6ST3	Q8IZP7	471 aa		13.57	□□□□□ -0.24
TNRC6A-215	ENST00000568903	VSIG10	Q8N0Z9	540 aa		13.57	□□□□□ -0.24
TNRC6A-215	ENST00000568903	WASHC2A	Q641Q2	1341 aa		13.57	□□□□□ -0.24
TNRC6A-215	ENST00000568903	KIF24	Q5T7B8	1368 aa		13.57	□□□□□ -0.24
TNRC6A-215	ENST00000568903	HSPA5	P11021	654 aa	Known RBP	13.56	□□□□□ -0.24
TNRC6A-215	ENST00000568903	RNF25	Q96BH1	459 aa	Predicted RBP	13.56	□□□□□ -0.24
TNRC6A-215	ENST00000568903	NCAPD2	Q15021	1401 aa		13.56	□□□□□ -0.24
TNRC6A-215	ENST00000568903	RIOK3	O14730	519 aa	Known RBP	13.55	□□□□□ -0.24
TNRC6A-215	ENST00000568903	YBX3	P16989	372 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
TNRC6A-215	ENST00000568903	EIF4A2	Q14240	407 aa	Known RBP	13.55	□□□□□ -0.24
TNRC6A-215	ENST00000568903	RASEF	Q8IZ41	740 aa		13.55	□□□□□ -0.24
TNRC6A-215	ENST00000568903	SPRYD3	Q8NCJ5	442 aa		13.55	□□□□□ -0.24
TNRC6A-215	ENST00000568903	CFAP44	Q96MT7	982 aa		13.55	□□□□□ -0.24
TNRC6A-215	ENST00000568903	TIMELESS	Q9UNS1	1208 aa		13.55	□□□□□ -0.24
TNRC6A-215	ENST00000568903	CHRM1	P11229	460 aa	Predicted RBP	13.54	□□□□□ -0.24
TNRC6A-215	ENST00000568903	NKX1-1	Q15270	411 aa	Predicted RBP	13.54	□□□□□ -0.24
TNRC6A-215	ENST00000568903	LINC00116	Q8NCU8	138 aa		13.54	□□□□□ -0.24
TNRC6A-215	ENST00000568903	PANK3	Q9H999	370 aa		13.54	□□□□□ -0.24
TNRC6A-215	ENST00000568903	ASAP1	Q9ULH1	1129 aa		13.54	□□□□□ -0.24
TNRC6A-215	ENST00000568903	MAP2	P11137	1827 aa	Known RBP	13.54	□□□□□ -0.24
TNRC6A-215	ENST00000568903	ITGB4	P16144	1822 aa		13.54	□□□□□ -0.24
TNRC6A-215	ENST00000568903	C5	P01031	1676 aa		13.53	□□□□□ -0.24
TNRC6A-215	ENST00000568903	PKD1L3	Q7Z443	1732 aa		13.53	□□□□□ -0.24
TNRC6A-215	ENST00000568903	PHF14	O94880	888 aa		13.53	□□□□□ -0.24
TNRC6A-215	ENST00000568903	ITPK1	Q13572	414 aa		13.53	□□□□□ -0.24
TNRC6A-215	ENST00000568903	ANKRD26	Q9UPS8	1709 aa		13.53	□□□□□ -0.24
TNRC6A-215	ENST00000568903	PHKG2	P15735	406 aa		13.52	□□□□□ -0.25
TNRC6A-215	ENST00000568903	WWC3	Q9ULE0	1092 aa		13.52	□□□□□ -0.25
TNRC6A-215	ENST00000568903	SPG7	Q9UQ90	795 aa		13.52	□□□□□ -0.25
TNRC6A-215	ENST00000568903	TAF1L	Q8IZX4	1826 aa		13.52	□□□□□ -0.25
TNRC6A-215	ENST00000568903	LOC102724428	A0A0B4J2F2	783 aa		13.51	□□□□□ -0.25
TNRC6A-215	ENST00000568903	SIK1	P57059	783 aa		13.51	□□□□□ -0.25
TNRC6A-215	ENST00000568903	ATG3	Q9NT62	314 aa		13.51	□□□□□ -0.25
TNRC6A-215	ENST00000568903	C4B	P0C0L5	1744 aa		13.5	□□□□□ -0.25
TNRC6A-215	ENST00000568903	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.5	□□□□□ -0.25
TNRC6A-215	ENST00000568903	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
TNRC6A-215	ENST00000568903	AK7	Q96M32	723 aa		13.5	□□□□□ -0.25
TNRC6A-215	ENST00000568903	SLC4A9	Q96Q91	983 aa		13.5	□□□□□ -0.25
TNRC6A-215	ENST00000568903	CHD4	Q14839	1912 aa		13.49	□□□□□ -0.25
TNRC6A-215	ENST00000568903	AEBP1	Q8IUX7	1158 aa		13.49	□□□□□ -0.25
TNRC6A-215	ENST00000568903	IFNL2	Q8IZJ0	200 aa		13.49	□□□□□ -0.25
TNRC6A-215	ENST00000568903	SMARCC1	Q92922	1105 aa	Predicted RBP	13.49	□□□□□ -0.25
TNRC6A-215	ENST00000568903	TMOD3	Q9NYL9	352 aa		13.49	□□□□□ -0.25
TNRC6A-215	ENST00000568903	CLSPN	Q9HAW4	1339 aa		13.48	□□□□□ -0.25
TNRC6A-215	ENST00000568903	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.48	□□□□□ -0.25	1e-7	■■□□□ 12.2
TNRC6A-215	ENST00000568903	IGSF1	Q8N6C5	1336 aa		13.47	□□□□□ -0.25
TNRC6A-215	ENST00000568903	ATP6V1A	P38606	617 aa		13.47	□□□□□ -0.25
TNRC6A-215	ENST00000568903	CCER1	Q8TC90	406 aa	Predicted RBP	13.47	□□□□□ -0.25
TNRC6A-215	ENST00000568903	UBR3	Q6ZT12	1888 aa		13.46	□□□□□ -0.25
TNRC6A-215	ENST00000568903	GNPAT	O15228	680 aa		13.46	□□□□□ -0.25
TNRC6A-215	ENST00000568903	FLAD1	Q8NFF5	587 aa		13.46	□□□□□ -0.25
TNRC6A-215	ENST00000568903	C1QTNF8	P60827	252 aa		13.45	□□□□□ -0.26
TNRC6A-215	ENST00000568903	MORC1	Q86VD1	984 aa		13.45	□□□□□ -0.26
TNRC6A-215	ENST00000568903	CD2AP	Q9Y5K6	639 aa		13.45	□□□□□ -0.26
TNRC6A-215	ENST00000568903	KDM6A	O15550	1401 aa	Predicted RBP	13.44	□□□□□ -0.26
TNRC6A-215	ENST00000568903	SSFA2	P28290	1259 aa		13.43	□□□□□ -0.26
TNRC6A-215	ENST00000568903	CHADL	Q6NUI6	762 aa		13.43	□□□□□ -0.26
TNRC6A-215	ENST00000568903	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.43	□□□□□ -0.26
TNRC6A-215	ENST00000568903	KDR	P35968	1356 aa		13.43	□□□□□ -0.26
TNRC6A-215	ENST00000568903	SENP3-EIF4A1	A0A087X0R7	540 aa		13.42	□□□□□ -0.26
TNRC6A-215	ENST00000568903	GRIN3B	O60391	1043 aa		13.42	□□□□□ -0.26
TNRC6A-215	ENST00000568903	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.42	□□□□□ -0.26
TNRC6A-215	ENST00000568903	SULT6B1	Q6IMI4	303 aa		13.42	□□□□□ -0.26
TNRC6A-215	ENST00000568903	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.42	□□□□□ -0.26
TNRC6A-215	ENST00000568903	ERVV-2	B6SEH9	535 aa		13.41	□□□□□ -0.26
TNRC6A-215	ENST00000568903	MMP10	P09238	476 aa		13.41	□□□□□ -0.26
TNRC6A-215	ENST00000568903	IL13	P35225	146 aa		13.41	□□□□□ -0.26
TNRC6A-215	ENST00000568903	NFATC2IP	Q8NCF5	419 aa		13.41	□□□□□ -0.26
TNRC6A-215	ENST00000568903	ARHGEF1	Q92888	912 aa	Known RBP	13.41	□□□□□ -0.26
TNRC6A-215	ENST00000568903	DCAF5	Q96JK2	942 aa		13.41	□□□□□ -0.26
TNRC6A-215	ENST00000568903	PTCD1	O75127	700 aa	Known RBP	13.4	□□□□□ -0.26
TNRC6A-215	ENST00000568903	MTHFS	P49914	203 aa		13.4	□□□□□ -0.26
TNRC6A-215	ENST00000568903	CABP4	P57796	275 aa		13.4	□□□□□ -0.26
TNRC6A-215	ENST00000568903	ZNF526	Q8TF50	670 aa	Predicted RBP	13.4	□□□□□ -0.26
TNRC6A-215	ENST00000568903	CEP350	Q5VT06	3117 aa		13.4	□□□□□ -0.26
TNRC6A-215	ENST00000568903	KIF7	Q2M1P5	1343 aa		13.39	□□□□□ -0.27
TNRC6A-215	ENST00000568903	ATP10D	Q9P241	1426 aa		13.39	□□□□□ -0.27
TNRC6A-215	ENST00000568903	STK25	O00506	426 aa		13.39	□□□□□ -0.27
TNRC6A-215	ENST00000568903	GIGYF1	O75420	1035 aa	Predicted RBP	13.39	□□□□□ -0.27
TNRC6A-215	ENST00000568903	PYGB	P11216	843 aa		13.39	□□□□□ -0.27

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