RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 ADAMTS8Q9UP79 889 aa16.51■□□□□ 0.23
RNF40-211ENST00000567365 TAF1LQ8IZX4 1826 aa16.51■□□□□ 0.23
RNF40-211ENST00000567365 CICQ96RK0 1608 aaPredicted RBP16.5■□□□□ 0.23
RNF40-211ENST00000567365 CABP4P57796 275 aa16.5■□□□□ 0.23
RNF40-211ENST00000567365 SMARCC1Q92922 1105 aaPredicted RBP16.5■□□□□ 0.23
RNF40-211ENST00000567365 HTATSF1O43719 755 aaKnown RBP16.49■□□□□ 0.23
RNF40-211ENST00000567365 NFE2L2Q16236 605 aa16.49■□□□□ 0.23
RNF40-211ENST00000567365 PNISRQ8TF01 805 aaKnown RBP16.49■□□□□ 0.23
RNF40-211ENST00000567365 PNNQ9H307 717 aaKnown RBP16.49■□□□□ 0.23
RNF40-211ENST00000567365 C5P01031 1676 aa16.49■□□□□ 0.23
RNF40-211ENST00000567365 UBR2Q8IWV8 1755 aa16.49■□□□□ 0.23
RNF40-211ENST00000567365 SLC4A9Q96Q91 983 aa16.48■□□□□ 0.23
RNF40-211ENST00000567365 KCPQ6ZWJ8 1503 aa16.47■□□□□ 0.23
RNF40-211ENST00000567365 KCNQ4P56696 695 aa16.47■□□□□ 0.23
RNF40-211ENST00000567365 WDR43Q15061 677 aaKnown RBP eCLIP16.47■□□□□ 0.23
RNF40-211ENST00000567365 QSER1Q2KHR3 1735 aa16.47■□□□□ 0.23
RNF40-211ENST00000567365 LOC102724428A0A0B4J2F2 783 aa16.46■□□□□ 0.23
RNF40-211ENST00000567365 SIK1P57059 783 aa16.46■□□□□ 0.23
RNF40-211ENST00000567365 AKT1S1Q96B36 256 aa16.46■□□□□ 0.23
RNF40-211ENST00000567365 CCNL1Q9UK58 526 aaPredicted RBP16.46■□□□□ 0.23
RNF40-211ENST00000567365 CASZ1Q86V15 1759 aa16.46■□□□□ 0.22
RNF40-211ENST00000567365 COL5A3P25940 1745 aaPredicted RBP16.45■□□□□ 0.22
RNF40-211ENST00000567365 TUBGCP6Q96RT7 1819 aa16.45■□□□□ 0.22
RNF40-211ENST00000567365 ZNF827Q17R98 1081 aa16.45■□□□□ 0.22
RNF40-211ENST00000567365 RUNDC1Q96C34 613 aa16.45■□□□□ 0.22
RNF40-211ENST00000567365 TJP1Q07157 1748 aa16.45■□□□□ 0.22
RNF40-211ENST00000567365 MAPK8IP3Q9UPT6 1336 aa16.45■□□□□ 0.22
RNF40-211ENST00000567365 TMPOP42166 694 aaKnown RBP16.44■□□□□ 0.22
RNF40-211ENST00000567365 ITPK1Q13572 414 aa16.44■□□□□ 0.22
RNF40-211ENST00000567365 DCTN1Q14203 1278 aa16.44■□□□□ 0.22
RNF40-211ENST00000567365 SLC15A2Q16348 729 aa16.44■□□□□ 0.22
RNF40-211ENST00000567365 NBPF14Q5TI25 921 aa16.44■□□□□ 0.22
RNF40-211ENST00000567365 CCDC146Q8IYE0 955 aa16.44■□□□□ 0.22
RNF40-211ENST00000567365 MRS2Q9HD23 443 aa16.44■□□□□ 0.22
RNF40-211ENST00000567365 C4BP0C0L5 1744 aa16.44■□□□□ 0.22
RNF40-211ENST00000567365 MCM10Q7L590 875 aa16.43■□□□□ 0.22
RNF40-211ENST00000567365 NEFMP07197 916 aa16.42■□□□□ 0.22
RNF40-211ENST00000567365 SLC39A6Q13433 755 aa16.42■□□□□ 0.22
RNF40-211ENST00000567365 MYH14Q7Z406 1995 aaKnown RBP16.41■□□□□ 0.22
RNF40-211ENST00000567365 TEFQ10587 303 aa16.41■□□□□ 0.22
RNF40-211ENST00000567365 LINC00116Q8NCU8 138 aa16.41■□□□□ 0.22
RNF40-211ENST00000567365 RTF1Q92541 710 aaKnown RBP16.41■□□□□ 0.22
RNF40-211ENST00000567365 UBR3Q6ZT12 1888 aa16.41■□□□□ 0.22
RNF40-211ENST00000567365 KDM3BQ7LBC6 1761 aa16.41■□□□□ 0.22
RNF40-211ENST00000567365 RIPK4P57078 832 aa16.4■□□□□ 0.22
RNF40-211ENST00000567365 ZNF790Q6PG37 636 aa16.4■□□□□ 0.22
RNF40-211ENST00000567365 PDGFDQ9GZP0 370 aaPredicted RBP16.4■□□□□ 0.22
RNF40-211ENST00000567365 STK32BQ9NY57 414 aa16.4■□□□□ 0.22
RNF40-211ENST00000567365 TRIM35Q9UPQ4 493 aa16.4■□□□□ 0.22
RNF40-211ENST00000567365 ATP6V1AP38606 617 aa16.39■□□□□ 0.21
RNF40-211ENST00000567365 AMIGO3Q86WK7 504 aa16.39■□□□□ 0.21
RNF40-211ENST00000567365 THUMPD2Q9BTF0 503 aaKnown RBP16.39■□□□□ 0.21
RNF40-211ENST00000567365 APAF1O14727 1248 aa16.38■□□□□ 0.21
RNF40-211ENST00000567365 KCNQ3O43525 872 aa16.38■□□□□ 0.21
RNF40-211ENST00000567365 PTCD1O75127 700 aaKnown RBP16.38■□□□□ 0.21
RNF40-211ENST00000567365 HMGB2P26583 209 aaKnown RBP16.38■□□□□ 0.21
RNF40-211ENST00000567365 RRP7AQ9Y3A4 280 aaKnown RBP16.38■□□□□ 0.21
RNF40-211ENST00000567365 COL24A1Q17RW2 1714 aa16.37■□□□□ 0.21
RNF40-211ENST00000567365 TAF7Q15545 349 aaPredicted RBP16.37■□□□□ 0.21
RNF40-211ENST00000567365 RC3H1Q5TC82 1133 aaKnown RBP16.37■□□□□ 0.21
RNF40-211ENST00000567365 VSIG10Q8N0Z9 540 aa16.37■□□□□ 0.21
RNF40-211ENST00000567365 ZNF496Q96IT1 587 aaPredicted RBP16.37■□□□□ 0.21
RNF40-211ENST00000567365 RBM42Q9BTD8 480 aaKnown RBP16.37■□□□□ 0.21
RNF40-211ENST00000567365 PNPLA7Q6ZV29 1317 aa16.37■□□□□ 0.21
RNF40-211ENST00000567365 BTBD11A6QL63 1104 aa16.36■□□□□ 0.21
RNF40-211ENST00000567365 CCER2I3L3R5 266 aa16.36■□□□□ 0.21
RNF40-211ENST00000567365 DIEXFQ68CQ4 756 aaKnown RBP16.36■□□□□ 0.21
RNF40-211ENST00000567365 SPON1Q9HCB6 807 aa16.36■□□□□ 0.21
RNF40-211ENST00000567365 CNTNAP4Q9C0A0 1308 aa16.36■□□□□ 0.21
RNF40-211ENST00000567365 HEG1Q9ULI3 1381 aa16.36■□□□□ 0.21
RNF40-211ENST00000567365 YY1P25490 414 aa16.35■□□□□ 0.21
RNF40-211ENST00000567365 LMOD3Q0VAK6 560 aa16.35■□□□□ 0.21
RNF40-211ENST00000567365 NCBP3Q53F19 620 aaKnown RBP16.35■□□□□ 0.21
RNF40-211ENST00000567365 DNAJC10Q8IXB1 793 aa16.34■□□□□ 0.21
RNF40-211ENST00000567365 CYP19A1P11511 503 aaPredicted RBP16.33■□□□□ 0.2
RNF40-211ENST00000567365 NEUROD2Q15784 382 aa16.33■□□□□ 0.2
RNF40-211ENST00000567365 COL23A1Q86Y22 540 aaPredicted RBP16.33■□□□□ 0.2
RNF40-211ENST00000567365 TTC5Q8N0Z6 440 aa16.33■□□□□ 0.2
RNF40-211ENST00000567365 BABAM1Q9NWV8 329 aa16.33■□□□□ 0.2
RNF40-211ENST00000567365 TFCP2L1Q9NZI6 479 aa16.33■□□□□ 0.2
RNF40-211ENST00000567365 PPP1R1BQ9UD71 204 aaPredicted RBP16.33■□□□□ 0.2
RNF40-211ENST00000567365 INTS5Q6P9B9 1019 aaKnown RBP16.32■□□□□ 0.2
RNF40-211ENST00000567365 FMNL2Q96PY5 1086 aa16.32■□□□□ 0.2
RNF40-211ENST00000567365 MIS18AQ9NYP9 233 aa16.32■□□□□ 0.2
RNF40-211ENST00000567365 CHL1O00533 1208 aa16.31■□□□□ 0.2
RNF40-211ENST00000567365 SSFA2P28290 1259 aa16.31■□□□□ 0.2
RNF40-211ENST00000567365 CRKLP46109 303 aaKnown RBP16.31■□□□□ 0.2
RNF40-211ENST00000567365 CCDC27Q2M243 656 aa16.31■□□□□ 0.2
RNF40-211ENST00000567365 AK7Q96M32 723 aa16.31■□□□□ 0.2
RNF40-211ENST00000567365 SGIP1Q9BQI5 828 aa16.31■□□□□ 0.2
RNF40-211ENST00000567365 C4AP0C0L4 1744 aa16.31■□□□□ 0.2
RNF40-211ENST00000567365 RPS6KA4O75676 772 aa16.3■□□□□ 0.2
RNF40-211ENST00000567365 ZNF853P0CG23 659 aa16.3■□□□□ 0.2
RNF40-211ENST00000567365 EIF4A1P60842 406 aaKnown RBP16.3■□□□□ 0.2
RNF40-211ENST00000567365 SMIM5Q71RC9 77 aa16.3■□□□□ 0.2
RNF40-211ENST00000567365 SLC16A10Q8TF71 515 aa16.3■□□□□ 0.2
RNF40-211ENST00000567365 LAMB4A4D0S4 1761 aa16.29■□□□□ 0.2
RNF40-211ENST00000567365 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.29■□□□□ 0.2
RNF40-211ENST00000567365 GNPATO15228 680 aa16.29■□□□□ 0.2
RNF40-211ENST00000567365 ZBTB7AO95365 584 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms