RNA–Protein interactions for RNA: ENST00000566286.5

TCF4-232, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-232ENST00000566286 INTS3Q68E01 1043 aaKnown RBP13.46□□□□□ -0.25
TCF4-232ENST00000566286 PLEKHM2Q8IWE5 1019 aa13.46□□□□□ -0.25
TCF4-232ENST00000566286 DCTPP1Q9H773 170 aa13.46□□□□□ -0.25
TCF4-232ENST00000566286 POLKQ9UBT6 870 aa13.46□□□□□ -0.25
TCF4-232ENST00000566286 C3P01024 1663 aa13.46□□□□□ -0.25
TCF4-232ENST00000566286 CYP2E1P05181 493 aaPredicted RBP13.46□□□□□ -0.26
TCF4-232ENST00000566286 TERF1P54274 439 aa13.46□□□□□ -0.26
TCF4-232ENST00000566286 CASC1Q6TDU7 716 aa13.46□□□□□ -0.26
TCF4-232ENST00000566286 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.46□□□□□ -0.26
TCF4-232ENST00000566286 TSPYL6Q8N831 410 aa13.46□□□□□ -0.26
TCF4-232ENST00000566286 MBIPQ9NS73 344 aa13.46□□□□□ -0.26
TCF4-232ENST00000566286 FER1L4A9Z1Z3 1794 aa13.46□□□□□ -0.26
TCF4-232ENST00000566286 TMEM2Q9UHN6 1383 aa13.45□□□□□ -0.26
TCF4-232ENST00000566286 CDK19Q9BWU1 502 aa13.45□□□□□ -0.26
TCF4-232ENST00000566286 KNDC1Q76NI1 1749 aa13.45□□□□□ -0.26
TCF4-232ENST00000566286 ST18O60284 1047 aa13.45□□□□□ -0.26
TCF4-232ENST00000566286 OFD1O75665 1012 aa13.45□□□□□ -0.26
TCF4-232ENST00000566286 MCTP1Q6DN14 999 aa13.45□□□□□ -0.26
TCF4-232ENST00000566286 PHACTR3Q96KR7 559 aa13.45□□□□□ -0.26
TCF4-232ENST00000566286 CABP1Q9NZU7 370 aa13.45□□□□□ -0.26
TCF4-232ENST00000566286 METP08581 1390 aa13.44□□□□□ -0.26
TCF4-232ENST00000566286 DLG5Q8TDM6 1919 aa13.44□□□□□ -0.26
TCF4-232ENST00000566286 MCM6Q14566 821 aa13.44□□□□□ -0.26
TCF4-232ENST00000566286 KIAA1211Q6ZU35 1233 aa13.44□□□□□ -0.26
TCF4-232ENST00000566286 FAM177A1Q8N128 213 aaPredicted RBP13.44□□□□□ -0.26
TCF4-232ENST00000566286 USP26Q9BXU7 913 aa13.44□□□□□ -0.26
TCF4-232ENST00000566286 CDK12Q9NYV4 1490 aaPredicted RBP13.44□□□□□ -0.26
TCF4-232ENST00000566286 CHRM1P11229 460 aaPredicted RBP13.43□□□□□ -0.26
TCF4-232ENST00000566286 LMBRD1Q9NUN5 540 aa13.43□□□□□ -0.26
TCF4-232ENST00000566286 HMOX1P09601 288 aa13.43□□□□□ -0.26
TCF4-232ENST00000566286 ZSCAN23Q3MJ62 389 aa13.43□□□□□ -0.26
TCF4-232ENST00000566286 THUMPD2Q9BTF0 503 aaKnown RBP13.43□□□□□ -0.26
TCF4-232ENST00000566286 PDCL3Q9H2J4 239 aa13.43□□□□□ -0.26
TCF4-232ENST00000566286 ELL2O00472 640 aaPredicted RBP13.42□□□□□ -0.26
TCF4-232ENST00000566286 HDGFP51858 240 aaKnown RBP13.42□□□□□ -0.26
TCF4-232ENST00000566286 CAVIN1Q6NZI2 390 aaKnown RBP13.42□□□□□ -0.26
TCF4-232ENST00000566286 RPAP2Q8IXW5 612 aaPredicted RBP13.42□□□□□ -0.26
TCF4-232ENST00000566286 WAPLQ7Z5K2 1190 aa13.42□□□□□ -0.26
TCF4-232ENST00000566286 ANKRD44Q8N8A2 993 aa13.42□□□□□ -0.26
TCF4-232ENST00000566286 TECPR2O15040 1411 aa13.42□□□□□ -0.26
TCF4-232ENST00000566286 CPSF1Q10570 1443 aaKnown RBP13.42□□□□□ -0.26
TCF4-232ENST00000566286 REC8O95072 547 aa13.41□□□□□ -0.26
TCF4-232ENST00000566286 NCLP19338 710 aaKnown RBP13.41□□□□□ -0.26
TCF4-232ENST00000566286 IL13P35225 146 aa13.41□□□□□ -0.26
TCF4-232ENST00000566286 CEBPAP49715 358 aaPredicted RBP13.41□□□□□ -0.26
TCF4-232ENST00000566286 FNBP4Q8N3X1 1017 aaPredicted RBP13.41□□□□□ -0.26
TCF4-232ENST00000566286 PDLIM2Q96JY6 352 aa13.41□□□□□ -0.26
TCF4-232ENST00000566286 CPS1P31327 1500 aa13.41□□□□□ -0.26
TCF4-232ENST00000566286 AATKQ6ZMQ8 1374 aa13.41□□□□□ -0.26
TCF4-232ENST00000566286 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.4□□□□□ -0.26
TCF4-232ENST00000566286 C8orf58Q8NAV2 365 aa13.4□□□□□ -0.26
TCF4-232ENST00000566286 POM121Q96HA1 1249 aa13.4□□□□□ -0.26
TCF4-232ENST00000566286 NOL7Q9UMY1 257 aaKnown RBP13.4□□□□□ -0.26
TCF4-232ENST00000566286 ADAMTS13Q76LX8 1427 aa13.4□□□□□ -0.26
TCF4-232ENST00000566286 ATP10DQ9P241 1426 aa13.4□□□□□ -0.26
TCF4-232ENST00000566286 MLLT3P42568 568 aaPredicted RBP13.4□□□□□ -0.26
TCF4-232ENST00000566286 EDC4Q6P2E9 1401 aaKnown RBP13.39□□□□□ -0.27
TCF4-232ENST00000566286 ZNF500O60304 480 aaPredicted RBP13.39□□□□□ -0.27
TCF4-232ENST00000566286 PKNOX2Q96KN3 472 aa13.39□□□□□ -0.27
TCF4-232ENST00000566286 MCM5P33992 734 aa13.39□□□□□ -0.27
TCF4-232ENST00000566286 FAM212AQ96EL1 285 aa13.39□□□□□ -0.27
TCF4-232ENST00000566286 PLEKHG1Q9ULL1 1385 aa13.38□□□□□ -0.27
TCF4-232ENST00000566286 SDSP20132 328 aa13.38□□□□□ -0.27
TCF4-232ENST00000566286 DHX37Q8IY37 1157 aaKnown RBP13.38□□□□□ -0.27
TCF4-232ENST00000566286 SIRT1Q96EB6 747 aa13.38□□□□□ -0.27
TCF4-232ENST00000566286 RBSNQ9H1K0 784 aa13.37□□□□□ -0.27
TCF4-232ENST00000566286 EMILIN1Q9Y6C2 1016 aa13.37□□□□□ -0.27
TCF4-232ENST00000566286 SLIT1O75093 1534 aa13.37□□□□□ -0.27
TCF4-232ENST00000566286 PRPF40AO75400 957 aaKnown RBP13.37□□□□□ -0.27
TCF4-232ENST00000566286 MBD3O95983 291 aa13.37□□□□□ -0.27
TCF4-232ENST00000566286 LTKP29376 864 aa13.37□□□□□ -0.27
TCF4-232ENST00000566286 CEP85Q6P2H3 762 aa13.37□□□□□ -0.27
TCF4-232ENST00000566286 TXNDC2Q86VQ3 553 aa13.37□□□□□ -0.27
TCF4-232ENST00000566286 ARHGAP23Q9P227 1491 aa13.37□□□□□ -0.27
TCF4-232ENST00000566286 SPDYE2BA6NHP3 402 aa13.36□□□□□ -0.27
TCF4-232ENST00000566286 ERC2O15083 957 aa13.36□□□□□ -0.27
TCF4-232ENST00000566286 SPDYE6P0CI01 402 aa13.36□□□□□ -0.27
TCF4-232ENST00000566286 PRIM1P49642 420 aaKnown RBP13.36□□□□□ -0.27
TCF4-232ENST00000566286 MCM2P49736 904 aa13.36□□□□□ -0.27
TCF4-232ENST00000566286 PKP1Q13835 747 aa13.36□□□□□ -0.27
TCF4-232ENST00000566286 CSPP1Q1MSJ5 1256 aa13.36□□□□□ -0.27
TCF4-232ENST00000566286 SPDYE2Q495Y8 402 aa13.36□□□□□ -0.27
TCF4-232ENST00000566286 LRSAM1Q6UWE0 723 aa13.36□□□□□ -0.27
TCF4-232ENST00000566286 C16orf71Q8IYS4 520 aaPredicted RBP13.36□□□□□ -0.27
TCF4-232ENST00000566286 MAP7D2Q96T17 732 aa13.36□□□□□ -0.27
TCF4-232ENST00000566286 PTPRCP08575 1304 aa13.36□□□□□ -0.27
TCF4-232ENST00000566286 RGS12O14924 1447 aa13.36□□□□□ -0.27
TCF4-232ENST00000566286 FBLN1P23142 703 aa13.36□□□□□ -0.27
TCF4-232ENST00000566286 GPT2Q8TD30 523 aa13.36□□□□□ -0.27
TCF4-232ENST00000566286 RTL1A6NKG5 1358 aa13.35□□□□□ -0.27
TCF4-232ENST00000566286 HMMRO75330 724 aa13.35□□□□□ -0.27
TCF4-232ENST00000566286 ZGPATQ8N5A5 531 aaKnown RBP13.35□□□□□ -0.27
TCF4-232ENST00000566286 ZKSCAN5Q9Y2L8 839 aa13.35□□□□□ -0.27
TCF4-232ENST00000566286 KIAA0232Q92628 1395 aa13.35□□□□□ -0.27
TCF4-232ENST00000566286 WASLO00401 505 aaPredicted RBP13.34□□□□□ -0.27
TCF4-232ENST00000566286 CCDC39Q9UFE4 941 aa13.34□□□□□ -0.27
TCF4-232ENST00000566286 ROBO2Q9HCK4 1378 aa13.34□□□□□ -0.27
TCF4-232ENST00000566286 PPP1R37O75864 691 aa13.34□□□□□ -0.27
TCF4-232ENST00000566286 OTUD7AQ8TE49 926 aaPredicted RBP13.34□□□□□ -0.27
TCF4-232ENST00000566286 OSBPL3Q9H4L5 887 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms