RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 LGR6Q9HBX8 967 aa24.95■■□□□ 1.58
CMTM3-210ENST00000565666 TFCP2L1Q9NZI6 479 aa24.95■■□□□ 1.58
CMTM3-210ENST00000565666 TUBGCP6Q96RT7 1819 aa24.94■■□□□ 1.58
CMTM3-210ENST00000565666 SPON1Q9HCB6 807 aa24.94■■□□□ 1.58
CMTM3-210ENST00000565666 MAP3K5Q99683 1374 aa24.93■■□□□ 1.58
CMTM3-210ENST00000565666 PHACTR3Q96KR7 559 aa24.93■■□□□ 1.58
CMTM3-210ENST00000565666 ADAMTS7Q9UKP4 1686 aa24.92■■□□□ 1.58
CMTM3-210ENST00000565666 GNAT3A8MTJ3 354 aa24.92■■□□□ 1.58
CMTM3-210ENST00000565666 ZBTB7AO95365 584 aa24.92■■□□□ 1.58
CMTM3-210ENST00000565666 ATP6V1AP38606 617 aa24.92■■□□□ 1.58
CMTM3-210ENST00000565666 RBM42Q9BTD8 480 aaKnown RBP24.92■■□□□ 1.58
CMTM3-210ENST00000565666 SLC52A2Q9HAB3 445 aa24.92■■□□□ 1.58
CMTM3-210ENST00000565666 C4BP0C0L5 1744 aa24.92■■□□□ 1.58
CMTM3-210ENST00000565666 NEFMP07197 916 aa24.91■■□□□ 1.58
CMTM3-210ENST00000565666 MRC1P22897 1456 aa24.9■■□□□ 1.58
CMTM3-210ENST00000565666 PRKRIP1Q9H875 184 aaPredicted RBP24.89■■□□□ 1.58
CMTM3-210ENST00000565666 PNPLA7Q6ZV29 1317 aa24.88■■□□□ 1.57
CMTM3-210ENST00000565666 AK7Q96M32 723 aa24.88■■□□□ 1.57
CMTM3-210ENST00000565666 ATF5Q9Y2D1 282 aaPredicted RBP24.88■■□□□ 1.57
CMTM3-210ENST00000565666 ZNF831Q5JPB2 1677 aa24.88■■□□□ 1.57
CMTM3-210ENST00000565666 ITPK1Q13572 414 aa24.87■■□□□ 1.57
CMTM3-210ENST00000565666 PPP1R1BQ9UD71 204 aaPredicted RBP24.87■■□□□ 1.57
CMTM3-210ENST00000565666 MSH5O43196 834 aa24.86■■□□□ 1.57
CMTM3-210ENST00000565666 PTCD1O75127 700 aaKnown RBP24.86■■□□□ 1.57
CMTM3-210ENST00000565666 TEFQ10587 303 aa24.86■■□□□ 1.57
CMTM3-210ENST00000565666 LINC00116Q8NCU8 138 aa24.86■■□□□ 1.57
CMTM3-210ENST00000565666 MTFR1LQ9H019 292 aa24.86■■□□□ 1.57
CMTM3-210ENST00000565666 PNNQ9H307 717 aaKnown RBP24.86■■□□□ 1.57
CMTM3-210ENST00000565666 IL17REQ8NFR9 667 aa24.83■■□□□ 1.57
CMTM3-210ENST00000565666 SLC16A10Q8TF71 515 aa24.83■■□□□ 1.57
CMTM3-210ENST00000565666 RTF1Q92541 710 aaKnown RBP24.83■■□□□ 1.57
CMTM3-210ENST00000565666 SLC4A9Q96Q91 983 aa24.83■■□□□ 1.57
CMTM3-210ENST00000565666 MAPK8IP3Q9UPT6 1336 aa24.83■■□□□ 1.56
CMTM3-210ENST00000565666 COL5A3P25940 1745 aaPredicted RBP24.82■■□□□ 1.56
CMTM3-210ENST00000565666 SLC39A6Q13433 755 aa24.82■■□□□ 1.56
CMTM3-210ENST00000565666 UBR3Q6ZT12 1888 aa24.82■■□□□ 1.56
CMTM3-210ENST00000565666 COL23A1Q86Y22 540 aaPredicted RBP24.82■■□□□ 1.56
CMTM3-210ENST00000565666 FLAD1Q8NFF5 587 aa24.82■■□□□ 1.56
CMTM3-210ENST00000565666 SIPA1L3O60292 1781 aaPredicted RBP24.81■■□□□ 1.56
CMTM3-210ENST00000565666 GNPATO15228 680 aa24.8■■□□□ 1.56
CMTM3-210ENST00000565666 PHF14O94880 888 aa24.8■■□□□ 1.56
CMTM3-210ENST00000565666 WDR43Q15061 677 aaKnown RBP eCLIP24.8■■□□□ 1.56
CMTM3-210ENST00000565666 PLEKHF1Q96S99 279 aa24.8■■□□□ 1.56
CMTM3-210ENST00000565666 DLG5Q8TDM6 1919 aa24.79■■□□□ 1.56
CMTM3-210ENST00000565666 TJP1Q07157 1748 aa24.79■■□□□ 1.56
CMTM3-210ENST00000565666 TTC5Q8N0Z6 440 aa24.79■■□□□ 1.56
CMTM3-210ENST00000565666 CEMIPQ8WUJ3 1361 aa24.79■■□□□ 1.56
CMTM3-210ENST00000565666 PTGER2P43116 358 aa24.78■■□□□ 1.56
CMTM3-210ENST00000565666 CICQ96RK0 1608 aaPredicted RBP24.78■■□□□ 1.56
CMTM3-210ENST00000565666 KCPQ6ZWJ8 1503 aa24.77■■□□□ 1.56
CMTM3-210ENST00000565666 HTATSF1O43719 755 aaKnown RBP24.77■■□□□ 1.56
CMTM3-210ENST00000565666 MCM10Q7L590 875 aa24.77■■□□□ 1.56
CMTM3-210ENST00000565666 UBR2Q8IWV8 1755 aa24.77■■□□□ 1.56
CMTM3-210ENST00000565666 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.76■■□□□ 1.55
CMTM3-210ENST00000565666 SSFA2P28290 1259 aa24.76■■□□□ 1.55
CMTM3-210ENST00000565666 POLD1P28340 1107 aa24.75■■□□□ 1.55
CMTM3-210ENST00000565666 DCTN1Q14203 1278 aa24.75■■□□□ 1.55
CMTM3-210ENST00000565666 NFE2L2Q16236 605 aa24.75■■□□□ 1.55
CMTM3-210ENST00000565666 RC3H1Q5TC82 1133 aaKnown RBP24.75■■□□□ 1.55
CMTM3-210ENST00000565666 SMIM5Q71RC9 77 aa24.75■■□□□ 1.55
CMTM3-210ENST00000565666 AMIGO3Q86WK7 504 aa24.75■■□□□ 1.55
CMTM3-210ENST00000565666 RTCBQ9Y3I0 505 aaKnown RBP24.75■■□□□ 1.55
CMTM3-210ENST00000565666 CNTNAP4Q9C0A0 1308 aa24.75■■□□□ 1.55
CMTM3-210ENST00000565666 COL24A1Q17RW2 1714 aa24.73■■□□□ 1.55
CMTM3-210ENST00000565666 BTBD11A6QL63 1104 aa24.73■■□□□ 1.55
CMTM3-210ENST00000565666 ANP32CO43423 234 aa24.73■■□□□ 1.55
CMTM3-210ENST00000565666 ZNF790Q6PG37 636 aa24.73■■□□□ 1.55
CMTM3-210ENST00000565666 DNAJC10Q8IXB1 793 aa24.73■■□□□ 1.55
CMTM3-210ENST00000565666 SGIP1Q9BQI5 828 aa24.73■■□□□ 1.55
CMTM3-210ENST00000565666 SRCAPQ6ZRS2 3230 aa24.72■■□□□ 1.55
CMTM3-210ENST00000565666 CRKLP46109 303 aaKnown RBP24.72■■□□□ 1.55
CMTM3-210ENST00000565666 MSL1Q68DK7 614 aa24.72■■□□□ 1.55
CMTM3-210ENST00000565666 CCDC146Q8IYE0 955 aa24.71■■□□□ 1.55
CMTM3-210ENST00000565666 ARXQ96QS3 562 aa24.71■■□□□ 1.55
CMTM3-210ENST00000565666 MYH14Q7Z406 1995 aaKnown RBP24.71■■□□□ 1.55
CMTM3-210ENST00000565666 RPS6KA4O75676 772 aa24.7■■□□□ 1.54
CMTM3-210ENST00000565666 TRAPPC3LQ5T215 181 aa24.7■■□□□ 1.54
CMTM3-210ENST00000565666 VSIG10Q8N0Z9 540 aa24.7■■□□□ 1.54
CMTM3-210ENST00000565666 ZNF496Q96IT1 587 aaPredicted RBP24.69■■□□□ 1.54
CMTM3-210ENST00000565666 ADAMTS8Q9UP79 889 aa24.69■■□□□ 1.54
CMTM3-210ENST00000565666 FMNL2Q96PY5 1086 aa24.68■■□□□ 1.54
CMTM3-210ENST00000565666 HEG1Q9ULI3 1381 aa24.67■■□□□ 1.54
CMTM3-210ENST00000565666 ADRA2BP18089 450 aa24.67■■□□□ 1.54
CMTM3-210ENST00000565666 RIPK4P57078 832 aa24.67■■□□□ 1.54
CMTM3-210ENST00000565666 RUNDC1Q96C34 613 aa24.67■■□□□ 1.54
CMTM3-210ENST00000565666 CCDC87Q9NVE4 849 aa24.67■■□□□ 1.54
CMTM3-210ENST00000565666 KCNQ3O43525 872 aa24.66■■□□□ 1.54
CMTM3-210ENST00000565666 CYP19A1P11511 503 aaPredicted RBP24.66■■□□□ 1.54
CMTM3-210ENST00000565666 TAF7Q15545 349 aaPredicted RBP24.66■■□□□ 1.54
CMTM3-210ENST00000565666 KLHL34Q8N239 644 aa24.66■■□□□ 1.54
CMTM3-210ENST00000565666 C4AP0C0L4 1744 aa24.65■■□□□ 1.54
CMTM3-210ENST00000565666 RFC4P35249 363 aa24.65■■□□□ 1.54
CMTM3-210ENST00000565666 TMPOP42166 694 aaKnown RBP24.65■■□□□ 1.54
CMTM3-210ENST00000565666 INTS5Q6P9B9 1019 aaKnown RBP24.65■■□□□ 1.54
CMTM3-210ENST00000565666 FHDC1Q9C0D6 1143 aaPredicted RBP24.65■■□□□ 1.54
CMTM3-210ENST00000565666 STARD3NLO95772 234 aa24.64■■□□□ 1.54
CMTM3-210ENST00000565666 LMOD3Q0VAK6 560 aa24.64■■□□□ 1.54
CMTM3-210ENST00000565666 ARHGEF1Q92888 912 aaKnown RBP24.64■■□□□ 1.54
CMTM3-210ENST00000565666 THUMPD2Q9BTF0 503 aaKnown RBP24.64■■□□□ 1.54
CMTM3-210ENST00000565666 TEX13AQ9BXU3 409 aaPredicted RBP24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms