RNA–Protein interactions for RNA: ENST00000564070.1

SPSB3-205, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 3

Gene SPSB3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-205ENST00000564070 GAS2L2Q8NHY3 880 aa21.42■■□□□ 1.02
SPSB3-205ENST00000564070 ARXQ96QS3 562 aa21.42■■□□□ 1.02
SPSB3-205ENST00000564070 MYBBP1AQ9BQG0 1328 aaKnown RBP21.42■■□□□ 1.02
SPSB3-205ENST00000564070 ADAMTS7Q9UKP4 1686 aa21.42■■□□□ 1.02
SPSB3-205ENST00000564070 QSER1Q2KHR3 1735 aa21.41■■□□□ 1.02
SPSB3-205ENST00000564070 DCAF8L1A6NGE4 600 aa21.41■■□□□ 1.02
SPSB3-205ENST00000564070 FCHSD2O94868 740 aa21.41■■□□□ 1.02
SPSB3-205ENST00000564070 PRKAR2BP31323 418 aa21.41■■□□□ 1.02
SPSB3-205ENST00000564070 ASAP1Q9ULH1 1129 aa21.41■■□□□ 1.02
SPSB3-205ENST00000564070 MRC1P22897 1456 aa21.4■■□□□ 1.02
SPSB3-205ENST00000564070 ATG3Q9NT62 314 aa21.4■■□□□ 1.02
SPSB3-205ENST00000564070 TFCP2L1Q9NZI6 479 aa21.4■■□□□ 1.02
SPSB3-205ENST00000564070 TUBGCP6Q96RT7 1819 aa21.4■■□□□ 1.02
SPSB3-205ENST00000564070 TAF1LQ8IZX4 1826 aa21.39■■□□□ 1.02
SPSB3-205ENST00000564070 MAP3K5Q99683 1374 aa21.38■■□□□ 1.01
SPSB3-205ENST00000564070 LOC102724428A0A0B4J2F2 783 aa21.38■■□□□ 1.01
SPSB3-205ENST00000564070 RNMTO43148 476 aaKnown RBP21.38■■□□□ 1.01
SPSB3-205ENST00000564070 SIK1P57059 783 aa21.38■■□□□ 1.01
SPSB3-205ENST00000564070 VIRMAQ69YN4 1812 aaKnown RBP21.38■■□□□ 1.01
SPSB3-205ENST00000564070 NFATC2IPQ8NCF5 419 aa21.37■■□□□ 1.01
SPSB3-205ENST00000564070 PHACTR3Q96KR7 559 aa21.37■■□□□ 1.01
SPSB3-205ENST00000564070 LGR6Q9HBX8 967 aa21.37■■□□□ 1.01
SPSB3-205ENST00000564070 GOLGB1Q14789 3259 aaKnown RBP21.37■■□□□ 1.01
SPSB3-205ENST00000564070 ZNF831Q5JPB2 1677 aa21.37■■□□□ 1.01
SPSB3-205ENST00000564070 PRKRIP1Q9H875 184 aaPredicted RBP21.36■■□□□ 1.01
SPSB3-205ENST00000564070 SLC52A2Q9HAB3 445 aa21.36■■□□□ 1.01
SPSB3-205ENST00000564070 C4BP0C0L5 1744 aa21.35■■□□□ 1.01
SPSB3-205ENST00000564070 GNAT3A8MTJ3 354 aa21.35■■□□□ 1.01
SPSB3-205ENST00000564070 KLHL34Q8N239 644 aa21.34■■□□□ 1.01
SPSB3-205ENST00000564070 SLC16A10Q8TF71 515 aa21.34■■□□□ 1.01
SPSB3-205ENST00000564070 ATP6V1AP38606 617 aa21.33■■□□□ 1.01
SPSB3-205ENST00000564070 COL23A1Q86Y22 540 aaPredicted RBP21.33■■□□□ 1.01
SPSB3-205ENST00000564070 MSH5O43196 834 aa21.32■■□□□ 1
SPSB3-205ENST00000564070 NEFMP07197 916 aa21.31■■□□□ 1
SPSB3-205ENST00000564070 RBM42Q9BTD8 480 aaKnown RBP21.31■■□□□ 1
SPSB3-205ENST00000564070 PNNQ9H307 717 aaKnown RBP21.31■■□□□ 1
SPSB3-205ENST00000564070 CICQ96RK0 1608 aaPredicted RBP21.3■■□□□ 1
SPSB3-205ENST00000564070 ITPK1Q13572 414 aa21.3■■□□□ 1
SPSB3-205ENST00000564070 MSL1Q68DK7 614 aa21.3■■□□□ 1
SPSB3-205ENST00000564070 SMIM5Q71RC9 77 aa21.3■■□□□ 1
SPSB3-205ENST00000564070 LINC00116Q8NCU8 138 aa21.3■■□□□ 1
SPSB3-205ENST00000564070 IL17REQ8NFR9 667 aa21.3■■□□□ 1
SPSB3-205ENST00000564070 AK7Q96M32 723 aa21.3■■□□□ 1
SPSB3-205ENST00000564070 CEMIPQ8WUJ3 1361 aa21.3■■□□□ 1
SPSB3-205ENST00000564070 COL24A1Q17RW2 1714 aa21.29■■□□□ 1
SPSB3-205ENST00000564070 POLD1P28340 1107 aa21.29■■□□□ 1
SPSB3-205ENST00000564070 NLGN2Q8NFZ4 835 aa21.29■■□□□ 1
SPSB3-205ENST00000564070 SLC4A9Q96Q91 983 aa21.29■■□□□ 1
SPSB3-205ENST00000564070 PLEKHF1Q96S99 279 aa21.29■■□□□ 1
SPSB3-205ENST00000564070 COL5A3P25940 1745 aaPredicted RBP21.29■■□□□ 1
SPSB3-205ENST00000564070 SIPA1L3O60292 1781 aaPredicted RBP21.28■■□□□ 1
SPSB3-205ENST00000564070 TEFQ10587 303 aa21.28■■□□□ 1
SPSB3-205ENST00000564070 AMIGO3Q86WK7 504 aa21.28■■□□□ 1
SPSB3-205ENST00000564070 FLAD1Q8NFF5 587 aa21.28■■□□□ 1
SPSB3-205ENST00000564070 PTCD1O75127 700 aaKnown RBP21.27■■□□□ 1
SPSB3-205ENST00000564070 UBR3Q6ZT12 1888 aa21.26■□□□□ 0.99
SPSB3-205ENST00000564070 KCPQ6ZWJ8 1503 aa21.26■□□□□ 0.99
SPSB3-205ENST00000564070 HTATSF1O43719 755 aaKnown RBP21.26■□□□□ 0.99
SPSB3-205ENST00000564070 RTF1Q92541 710 aaKnown RBP21.26■□□□□ 0.99
SPSB3-205ENST00000564070 TJP1Q07157 1748 aa21.26■□□□□ 0.99
SPSB3-205ENST00000564070 MAPK8IP3Q9UPT6 1336 aa21.26■□□□□ 0.99
SPSB3-205ENST00000564070 UBR2Q8IWV8 1755 aa21.25■□□□□ 0.99
SPSB3-205ENST00000564070 GPR162Q16538 588 aa21.25■□□□□ 0.99
SPSB3-205ENST00000564070 SSFA2P28290 1259 aa21.24■□□□□ 0.99
SPSB3-205ENST00000564070 SLC39A6Q13433 755 aa21.24■□□□□ 0.99
SPSB3-205ENST00000564070 PELP1Q8IZL8 1130 aaKnown RBP21.24■□□□□ 0.99
SPSB3-205ENST00000564070 ZNF784Q8NCA9 323 aaPredicted RBP21.24■□□□□ 0.99
SPSB3-205ENST00000564070 CNTNAP4Q9C0A0 1308 aa21.24■□□□□ 0.99
SPSB3-205ENST00000564070 WDR43Q15061 677 aaKnown RBP eCLIP21.23■□□□□ 0.99
SPSB3-205ENST00000564070 RC3H1Q5TC82 1133 aaKnown RBP21.23■□□□□ 0.99
SPSB3-205ENST00000564070 GNPATO15228 680 aa21.22■□□□□ 0.99
SPSB3-205ENST00000564070 NFE2L2Q16236 605 aa21.22■□□□□ 0.99
SPSB3-205ENST00000564070 MCM10Q7L590 875 aa21.22■□□□□ 0.99
SPSB3-205ENST00000564070 TTC5Q8N0Z6 440 aa21.22■□□□□ 0.99
SPSB3-205ENST00000564070 DLG5Q8TDM6 1919 aa21.21■□□□□ 0.99
SPSB3-205ENST00000564070 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.21■□□□□ 0.99
SPSB3-205ENST00000564070 VSIG10Q8N0Z9 540 aa21.21■□□□□ 0.99
SPSB3-205ENST00000564070 PHF14O94880 888 aa21.2■□□□□ 0.98
SPSB3-205ENST00000564070 ZNF790Q6PG37 636 aa21.2■□□□□ 0.98
SPSB3-205ENST00000564070 BTBD11A6QL63 1104 aa21.19■□□□□ 0.98
SPSB3-205ENST00000564070 RTCBQ9Y3I0 505 aaKnown RBP21.19■□□□□ 0.98
SPSB3-205ENST00000564070 ANP32CO43423 234 aa21.18■□□□□ 0.98
SPSB3-205ENST00000564070 DCTN1Q14203 1278 aa21.18■□□□□ 0.98
SPSB3-205ENST00000564070 YBX3P16989 372 aaKnown RBP eCLIP21.17■□□□□ 0.98
SPSB3-205ENST00000564070 ADRA2BP18089 450 aa21.17■□□□□ 0.98
SPSB3-205ENST00000564070 CRKLP46109 303 aaKnown RBP21.17■□□□□ 0.98
SPSB3-205ENST00000564070 DNAJC10Q8IXB1 793 aa21.17■□□□□ 0.98
SPSB3-205ENST00000564070 CHD4Q14839 1912 aa21.17■□□□□ 0.98
SPSB3-205ENST00000564070 RPS6KA4O75676 772 aa21.16■□□□□ 0.98
SPSB3-205ENST00000564070 ADAMTS8Q9UP79 889 aa21.16■□□□□ 0.98
SPSB3-205ENST00000564070 MYH14Q7Z406 1995 aaKnown RBP21.16■□□□□ 0.98
SPSB3-205ENST00000564070 HEG1Q9ULI3 1381 aa21.15■□□□□ 0.98
SPSB3-205ENST00000564070 TRAPPC3LQ5T215 181 aa21.15■□□□□ 0.98
SPSB3-205ENST00000564070 RUNDC1Q96C34 613 aa21.15■□□□□ 0.98
SPSB3-205ENST00000564070 ZNF496Q96IT1 587 aaPredicted RBP21.15■□□□□ 0.98
SPSB3-205ENST00000564070 FMNL2Q96PY5 1086 aa21.15■□□□□ 0.98
SPSB3-205ENST00000564070 CYP19A1P11511 503 aaPredicted RBP21.14■□□□□ 0.97
SPSB3-205ENST00000564070 TAF7Q15545 349 aaPredicted RBP21.14■□□□□ 0.97
SPSB3-205ENST00000564070 CCDC146Q8IYE0 955 aa21.14■□□□□ 0.97
SPSB3-205ENST00000564070 TMPOP42166 694 aaKnown RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms