RNA–Protein interactions for RNA: ENST00000563995.1

SLX1A-204, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

TSL 3

Gene SLX1A, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-204ENST00000563995 NUDCQ9Y266 331 aa26.09■■□□□ 1.77
SLX1A-204ENST00000563995 ANP32CO43423 234 aa26.08■■□□□ 1.77
SLX1A-204ENST00000563995 C4BP0C0L5 1744 aa26.08■■□□□ 1.76
SLX1A-204ENST00000563995 HMOX1P09601 288 aa26.06■■□□□ 1.76
SLX1A-204ENST00000563995 ZNF526Q8TF50 670 aaPredicted RBP26.06■■□□□ 1.76
SLX1A-204ENST00000563995 PCDH11XQ9BZA7 1347 aa26.06■■□□□ 1.76
SLX1A-204ENST00000563995 PCDH11YQ9BZA8 1340 aa26.06■■□□□ 1.76
SLX1A-204ENST00000563995 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.05■■□□□ 1.76
SLX1A-204ENST00000563995 SPG7Q9UQ90 795 aa26.04■■□□□ 1.76
SLX1A-204ENST00000563995 PALLDQ8WX93 1383 aa26.04■■□□□ 1.76
SLX1A-204ENST00000563995 MSH5O43196 834 aa26.02■■□□□ 1.76
SLX1A-204ENST00000563995 ADCY9O60503 1353 aa26.02■■□□□ 1.76
SLX1A-204ENST00000563995 CYP27B1O15528 508 aa26.01■■□□□ 1.75
SLX1A-204ENST00000563995 U2AF1L5P0DN76 240 aaPredicted RBP26.01■■□□□ 1.75
SLX1A-204ENST00000563995 U2AF1Q01081 240 aaKnown RBP eCLIP26.01■■□□□ 1.75
SLX1A-204ENST00000563995 MSL1Q68DK7 614 aa26.01■■□□□ 1.75
SLX1A-204ENST00000563995 AMOTQ4VCS5 1084 aa26■■□□□ 1.75
SLX1A-204ENST00000563995 PLEKHO1Q53GL0 409 aaPredicted RBP26■■□□□ 1.75
SLX1A-204ENST00000563995 APLP1P51693 650 aa25.99■■□□□ 1.75
SLX1A-204ENST00000563995 CAPN15O75808 1086 aa25.98■■□□□ 1.75
SLX1A-204ENST00000563995 RSPH6AQ9H0K4 717 aa25.98■■□□□ 1.75
SLX1A-204ENST00000563995 MPRIPQ6WCQ1 1025 aa25.96■■□□□ 1.75
SLX1A-204ENST00000563995 FLAD1Q8NFF5 587 aa25.96■■□□□ 1.75
SLX1A-204ENST00000563995 FCHSD2O94868 740 aa25.95■■□□□ 1.74
SLX1A-204ENST00000563995 HMGB2P26583 209 aaKnown RBP25.95■■□□□ 1.74
SLX1A-204ENST00000563995 IFNL2Q8IZJ0 200 aa25.95■■□□□ 1.74
SLX1A-204ENST00000563995 CD2APQ9Y5K6 639 aa25.95■■□□□ 1.74
SLX1A-204ENST00000563995 PHKG2P15735 406 aa25.94■■□□□ 1.74
SLX1A-204ENST00000563995 PRKAR2BP31323 418 aa25.94■■□□□ 1.74
SLX1A-204ENST00000563995 ZNF530Q6P9A1 599 aaPredicted RBP25.94■■□□□ 1.74
SLX1A-204ENST00000563995 AMIGO3Q86WK7 504 aa25.94■■□□□ 1.74
SLX1A-204ENST00000563995 DNAJC5GQ8N7S2 189 aa25.94■■□□□ 1.74
SLX1A-204ENST00000563995 NKX1-1Q15270 411 aaPredicted RBP25.93■■□□□ 1.74
SLX1A-204ENST00000563995 KIF3CO14782 793 aa25.92■■□□□ 1.74
SLX1A-204ENST00000563995 COL13A1Q5TAT6 717 aaPredicted RBP25.92■■□□□ 1.74
SLX1A-204ENST00000563995 SMARCC1Q92922 1105 aaPredicted RBP25.92■■□□□ 1.74
SLX1A-204ENST00000563995 PIGBQ92521 554 aa25.91■■□□□ 1.74
SLX1A-204ENST00000563995 MTHFSDQ2M296 383 aaKnown RBP25.9■■□□□ 1.74
SLX1A-204ENST00000563995 CCDC184Q52MB2 194 aa25.9■■□□□ 1.74
SLX1A-204ENST00000563995 KIF13BQ9NQT8 1826 aa25.89■■□□□ 1.74
SLX1A-204ENST00000563995 C1orf141Q5JVX7 400 aa25.89■■□□□ 1.74
SLX1A-204ENST00000563995 AK7Q96M32 723 aa25.89■■□□□ 1.74
SLX1A-204ENST00000563995 HSP90AB1P08238 724 aaKnown RBP25.88■■□□□ 1.73
SLX1A-204ENST00000563995 WDR43Q15061 677 aaKnown RBP eCLIP25.88■■□□□ 1.73
SLX1A-204ENST00000563995 PHACTR3Q96KR7 559 aa25.88■■□□□ 1.73
SLX1A-204ENST00000563995 AKAP4Q5JQC9 854 aa25.87■■□□□ 1.73
SLX1A-204ENST00000563995 GAS2L2Q8NHY3 880 aa25.87■■□□□ 1.73
SLX1A-204ENST00000563995 PNNQ9H307 717 aaKnown RBP25.87■■□□□ 1.73
SLX1A-204ENST00000563995 KIAA1551Q9HCM1 1747 aa25.86■■□□□ 1.73
SLX1A-204ENST00000563995 PRELPP51888 382 aa25.86■■□□□ 1.73
SLX1A-204ENST00000563995 DIEXFQ68CQ4 756 aaKnown RBP25.86■■□□□ 1.73
SLX1A-204ENST00000563995 SMIM5Q71RC9 77 aa25.86■■□□□ 1.73
SLX1A-204ENST00000563995 PLEKHF1Q96S99 279 aa25.86■■□□□ 1.73
SLX1A-204ENST00000563995 ZNF831Q5JPB2 1677 aa25.86■■□□□ 1.73
SLX1A-204ENST00000563995 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.85■■□□□ 1.73
SLX1A-204ENST00000563995 PHF14O94880 888 aa25.85■■□□□ 1.73
SLX1A-204ENST00000563995 DCAF5Q96JK2 942 aa25.85■■□□□ 1.73
SLX1A-204ENST00000563995 MRS2Q9HD23 443 aa25.85■■□□□ 1.73
SLX1A-204ENST00000563995 KDM6AO15550 1401 aaPredicted RBP25.85■■□□□ 1.73
SLX1A-204ENST00000563995 TNS4Q8IZW8 715 aa25.84■■□□□ 1.73
SLX1A-204ENST00000563995 LINC00116Q8NCU8 138 aa25.84■■□□□ 1.73
SLX1A-204ENST00000563995 CICQ96RK0 1608 aaPredicted RBP25.84■■□□□ 1.73
SLX1A-204ENST00000563995 COL5A3P25940 1745 aaPredicted RBP25.83■■□□□ 1.73
SLX1A-204ENST00000563995 LOC102724428A0A0B4J2F2 783 aa25.83■■□□□ 1.73
SLX1A-204ENST00000563995 NEFMP07197 916 aa25.83■■□□□ 1.73
SLX1A-204ENST00000563995 SSFA2P28290 1259 aa25.83■■□□□ 1.73
SLX1A-204ENST00000563995 SIK1P57059 783 aa25.83■■□□□ 1.73
SLX1A-204ENST00000563995 ADAMTS8Q9UP79 889 aa25.82■■□□□ 1.72
SLX1A-204ENST00000563995 N4BP2Q86UW6 1770 aaPredicted RBP25.8■■□□□ 1.72
SLX1A-204ENST00000563995 MAPK8IP3Q9UPT6 1336 aa25.8■■□□□ 1.72
SLX1A-204ENST00000563995 ADAMTS7Q9UKP4 1686 aa25.8■■□□□ 1.72
SLX1A-204ENST00000563995 ERVV-2B6SEH9 535 aa25.79■■□□□ 1.72
SLX1A-204ENST00000563995 ITPK1Q13572 414 aa25.79■■□□□ 1.72
SLX1A-204ENST00000563995 TMOD3Q9NYL9 352 aa25.79■■□□□ 1.72
SLX1A-204ENST00000563995 ASAP1Q9ULH1 1129 aa25.79■■□□□ 1.72
SLX1A-204ENST00000563995 SCN11AQ9UI33 1791 aa25.79■■□□□ 1.72
SLX1A-204ENST00000563995 GNAT3A8MTJ3 354 aa25.78■■□□□ 1.72
SLX1A-204ENST00000563995 TOMM70O94826 608 aa25.78■■□□□ 1.72
SLX1A-204ENST00000563995 PNISRQ8TF01 805 aaKnown RBP25.78■■□□□ 1.72
SLX1A-204ENST00000563995 BRCA1P38398 1863 aaKnown RBP25.78■■□□□ 1.72
SLX1A-204ENST00000563995 RNMTO43148 476 aaKnown RBP25.77■■□□□ 1.72
SLX1A-204ENST00000563995 CCDC146Q8IYE0 955 aa25.76■■□□□ 1.71
SLX1A-204ENST00000563995 LGR6Q9HBX8 967 aa25.76■■□□□ 1.71
SLX1A-204ENST00000563995 C4AP0C0L4 1744 aa25.76■■□□□ 1.71
SLX1A-204ENST00000563995 MYH14Q7Z406 1995 aaKnown RBP25.75■■□□□ 1.71
SLX1A-204ENST00000563995 GNPATO15228 680 aa25.75■■□□□ 1.71
SLX1A-204ENST00000563995 RUNDC1Q96C34 613 aa25.75■■□□□ 1.71
SLX1A-204ENST00000563995 ATG3Q9NT62 314 aa25.75■■□□□ 1.71
SLX1A-204ENST00000563995 WWC3Q9ULE0 1092 aa25.75■■□□□ 1.71
SLX1A-204ENST00000563995 VIRMAQ69YN4 1812 aaKnown RBP25.74■■□□□ 1.71
SLX1A-204ENST00000563995 MRC1P22897 1456 aa25.74■■□□□ 1.71
SLX1A-204ENST00000563995 ATP6V1AP38606 617 aa25.74■■□□□ 1.71
SLX1A-204ENST00000563995 CABP4P57796 275 aa25.74■■□□□ 1.71
SLX1A-204ENST00000563995 NFE2L2Q16236 605 aa25.74■■□□□ 1.71
SLX1A-204ENST00000563995 WDR90Q96KV7 1748 aa25.74■■□□□ 1.71
SLX1A-204ENST00000563995 PXDNLA1KZ92 1463 aa25.73■■□□□ 1.71
SLX1A-204ENST00000563995 JMYQ8N9B5 988 aa25.73■■□□□ 1.71
SLX1A-204ENST00000563995 KLRG1Q96E93 195 aa25.73■■□□□ 1.71
SLX1A-204ENST00000563995 HTATSF1O43719 755 aaKnown RBP25.71■■□□□ 1.71
SLX1A-204ENST00000563995 IL17REQ8NFR9 667 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms