RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 SHANK3Q9BYB0 1731 aa25.1■■□□□ 1.61
SPSB3-204ENST00000563741 RCAN3Q9UKA8 241 aa25.09■■□□□ 1.61
SPSB3-204ENST00000563741 LAS1LQ9Y4W2 734 aaKnown RBP25.09■■□□□ 1.61
SPSB3-204ENST00000563741 EZH2Q15910 746 aaKnown RBP25.09■■□□□ 1.61
SPSB3-204ENST00000563741 SUPT16HQ9Y5B9 1047 aaKnown RBP25.09■■□□□ 1.61
SPSB3-204ENST00000563741 CYP27B1O15528 508 aa25.08■■□□□ 1.61
SPSB3-204ENST00000563741 PHKG2P15735 406 aa25.08■■□□□ 1.61
SPSB3-204ENST00000563741 MBIPQ9NS73 344 aa25.08■■□□□ 1.61
SPSB3-204ENST00000563741 NHSQ6T4R5 1651 aa25.08■■□□□ 1.6
SPSB3-204ENST00000563741 ADAMTS7Q9UKP4 1686 aa25.08■■□□□ 1.6
SPSB3-204ENST00000563741 PTF1AQ7RTS3 328 aa25.07■■□□□ 1.6
SPSB3-204ENST00000563741 MPRIPQ6WCQ1 1025 aa25.06■■□□□ 1.6
SPSB3-204ENST00000563741 LGR6Q9HBX8 967 aa25.06■■□□□ 1.6
SPSB3-204ENST00000563741 PCDH11XQ9BZA7 1347 aa25.06■■□□□ 1.6
SPSB3-204ENST00000563741 PCDH11YQ9BZA8 1340 aa25.06■■□□□ 1.6
SPSB3-204ENST00000563741 CHL1O00533 1208 aa25.06■■□□□ 1.6
SPSB3-204ENST00000563741 IFNL2Q8IZJ0 200 aa25.06■■□□□ 1.6
SPSB3-204ENST00000563741 ACSBG1Q96GR2 724 aa25.06■■□□□ 1.6
SPSB3-204ENST00000563741 KDM6AO15550 1401 aaPredicted RBP25.05■■□□□ 1.6
SPSB3-204ENST00000563741 RGPD3A6NKT7 1758 aaPredicted RBP25.05■■□□□ 1.6
SPSB3-204ENST00000563741 RGPD4Q7Z3J3 1758 aa25.05■■□□□ 1.6
SPSB3-204ENST00000563741 PLSCR1O15162 318 aa25.04■■□□□ 1.6
SPSB3-204ENST00000563741 RNMTO43148 476 aaKnown RBP25.04■■□□□ 1.6
SPSB3-204ENST00000563741 KCNQ2O43526 872 aa25.04■■□□□ 1.6
SPSB3-204ENST00000563741 EXOSC9Q06265 439 aaKnown RBP25.04■■□□□ 1.6
SPSB3-204ENST00000563741 RREB1Q92766 1687 aa25.03■■□□□ 1.6
SPSB3-204ENST00000563741 RNF123Q5XPI4 1314 aa25.02■■□□□ 1.6
SPSB3-204ENST00000563741 MIS18AQ9NYP9 233 aa25■■□□□ 1.59
SPSB3-204ENST00000563741 DOT1LQ8TEK3 1739 aa24.99■■□□□ 1.59
SPSB3-204ENST00000563741 BTAF1O14981 1849 aa24.99■■□□□ 1.59
SPSB3-204ENST00000563741 HSP90AB1P08238 724 aaKnown RBP24.99■■□□□ 1.59
SPSB3-204ENST00000563741 CT47B1P0C2W7 299 aaPredicted RBP24.99■■□□□ 1.59
SPSB3-204ENST00000563741 TAF7Q15545 349 aaPredicted RBP24.99■■□□□ 1.59
SPSB3-204ENST00000563741 DCAF5Q96JK2 942 aa24.99■■□□□ 1.59
SPSB3-204ENST00000563741 TSPYL4Q9UJ04 414 aa24.99■■□□□ 1.59
SPSB3-204ENST00000563741 NUP188Q5SRE5 1749 aa24.99■■□□□ 1.59
SPSB3-204ENST00000563741 SCN11AQ9UI33 1791 aa24.99■■□□□ 1.59
SPSB3-204ENST00000563741 TEFQ10587 303 aa24.98■■□□□ 1.59
SPSB3-204ENST00000563741 VIRMAQ69YN4 1812 aaKnown RBP24.98■■□□□ 1.59
SPSB3-204ENST00000563741 MRC1P22897 1456 aa24.98■■□□□ 1.59
SPSB3-204ENST00000563741 BABAM1Q9NWV8 329 aa24.98■■□□□ 1.59
SPSB3-204ENST00000563741 PRIM1P49642 420 aaKnown RBP24.96■■□□□ 1.59
SPSB3-204ENST00000563741 NKX1-1Q15270 411 aaPredicted RBP24.96■■□□□ 1.59
SPSB3-204ENST00000563741 TSPYL6Q8N831 410 aa24.95■■□□□ 1.59
SPSB3-204ENST00000563741 SIPA1L3O60292 1781 aaPredicted RBP24.95■■□□□ 1.58
SPSB3-204ENST00000563741 RARSP54136 660 aaKnown RBP24.95■■□□□ 1.58
SPSB3-204ENST00000563741 RRP1P56182 461 aaKnown RBP24.95■■□□□ 1.58
SPSB3-204ENST00000563741 C8orf58Q8NAV2 365 aa24.95■■□□□ 1.58
SPSB3-204ENST00000563741 SYTL4Q96C24 671 aaPredicted RBP24.95■■□□□ 1.58
SPSB3-204ENST00000563741 GTF3C3Q9Y5Q9 886 aa24.95■■□□□ 1.58
SPSB3-204ENST00000563741 SLC52A2Q9HAB3 445 aa24.94■■□□□ 1.58
SPSB3-204ENST00000563741 KRT24Q2M2I5 525 aa24.93■■□□□ 1.58
SPSB3-204ENST00000563741 NBPF14Q5TI25 921 aa24.93■■□□□ 1.58
SPSB3-204ENST00000563741 PROM2Q8N271 834 aa24.92■■□□□ 1.58
SPSB3-204ENST00000563741 KDM3BQ7LBC6 1761 aa24.92■■□□□ 1.58
SPSB3-204ENST00000563741 BCAR3O75815 825 aa24.92■■□□□ 1.58
SPSB3-204ENST00000563741 TXNRD1Q16881 649 aa24.92■■□□□ 1.58
SPSB3-204ENST00000563741 PSDA5PKW4 1024 aaPredicted RBP24.91■■□□□ 1.58
SPSB3-204ENST00000563741 TWISTNBQ3B726 338 aaPredicted RBP24.91■■□□□ 1.58
SPSB3-204ENST00000563741 BTBD11A6QL63 1104 aa24.9■■□□□ 1.58
SPSB3-204ENST00000563741 ELL2O00472 640 aaPredicted RBP24.9■■□□□ 1.58
SPSB3-204ENST00000563741 VAMP4O75379 141 aa24.9■■□□□ 1.58
SPSB3-204ENST00000563741 NEFLP07196 543 aa24.9■■□□□ 1.58
SPSB3-204ENST00000563741 R3HDM1Q15032 1099 aaKnown RBP24.89■■□□□ 1.58
SPSB3-204ENST00000563741 NFATC2IPQ8NCF5 419 aa24.89■■□□□ 1.57
SPSB3-204ENST00000563741 ZNF428Q96B54 188 aa24.89■■□□□ 1.57
SPSB3-204ENST00000563741 BCL2L13Q9BXK5 485 aa24.89■■□□□ 1.57
SPSB3-204ENST00000563741 TOGARAM1Q9Y4F4 1720 aa24.88■■□□□ 1.57
SPSB3-204ENST00000563741 ITGB4P16144 1822 aa24.88■■□□□ 1.57
SPSB3-204ENST00000563741 ERVV-2B6SEH9 535 aa24.87■■□□□ 1.57
SPSB3-204ENST00000563741 IRX6P78412 446 aaPredicted RBP24.87■■□□□ 1.57
SPSB3-204ENST00000563741 SSH1Q8WYL5 1049 aa24.87■■□□□ 1.57
SPSB3-204ENST00000563741 KCNQ3O43525 872 aa24.86■■□□□ 1.57
SPSB3-204ENST00000563741 CABP4P57796 275 aa24.86■■□□□ 1.57
SPSB3-204ENST00000563741 PLIN1O60240 522 aa24.86■■□□□ 1.57
SPSB3-204ENST00000563741 EIF4A1P60842 406 aaKnown RBP24.85■■□□□ 1.57
SPSB3-204ENST00000563741 SMC4Q9NTJ3 1288 aa24.85■■□□□ 1.57
SPSB3-204ENST00000563741 FKBP8Q14318 412 aa24.84■■□□□ 1.57
SPSB3-204ENST00000563741 ALDH1L2Q3SY69 923 aa24.84■■□□□ 1.57
SPSB3-204ENST00000563741 LY75O60449 1722 aa24.83■■□□□ 1.57
SPSB3-204ENST00000563741 SLC39A6Q13433 755 aa24.82■■□□□ 1.56
SPSB3-204ENST00000563741 SLC27A3Q5K4L6 730 aa24.82■■□□□ 1.56
SPSB3-204ENST00000563741 ZNF790Q6PG37 636 aa24.82■■□□□ 1.56
SPSB3-204ENST00000563741 SOS1Q07889 1333 aaPredicted RBP24.82■■□□□ 1.56
SPSB3-204ENST00000563741 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.81■■□□□ 1.56
SPSB3-204ENST00000563741 HEG1Q9ULI3 1381 aa24.81■■□□□ 1.56
SPSB3-204ENST00000563741 ANO8Q9HCE9 1232 aaPredicted RBP24.81■■□□□ 1.56
SPSB3-204ENST00000563741 PIGBQ92521 554 aa24.79■■□□□ 1.56
SPSB3-204ENST00000563741 STK32BQ9NY57 414 aa24.79■■□□□ 1.56
SPSB3-204ENST00000563741 BRPF1P55201 1214 aaPredicted RBP24.78■■□□□ 1.56
SPSB3-204ENST00000563741 LRRC4BQ9NT99 713 aa24.78■■□□□ 1.56
SPSB3-204ENST00000563741 TMOD3Q9NYL9 352 aa24.78■■□□□ 1.56
SPSB3-204ENST00000563741 PAPPAQ13219 1627 aa24.78■■□□□ 1.56
SPSB3-204ENST00000563741 TCERG1O14776 1098 aaKnown RBP24.78■■□□□ 1.56
SPSB3-204ENST00000563741 HOXB7P09629 217 aa24.78■■□□□ 1.56
SPSB3-204ENST00000563741 FRAT1Q92837 279 aaPredicted RBP24.78■■□□□ 1.56
SPSB3-204ENST00000563741 C20orf194Q5TEA3 1177 aa24.77■■□□□ 1.56
SPSB3-204ENST00000563741 MRPL50Q8N5N7 158 aaKnown RBP24.77■■□□□ 1.56
SPSB3-204ENST00000563741 SMARCC1Q92922 1105 aaPredicted RBP24.77■■□□□ 1.56
SPSB3-204ENST00000563741 KIF16BQ96L93 1317 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms