RNA–Protein interactions for RNA: ENST00000563554.1

AC009163.3-201, humanhuman

TSL 3 BASIC

Gene AC009163.3, Length 852 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009163.3-201ENST00000563554 CICQ96RK0 1608 aaPredicted RBP18.63■□□□□ 0.57
AC009163.3-201ENST00000563554 TJP1Q07157 1748 aa18.63■□□□□ 0.57
AC009163.3-201ENST00000563554 GNAT3A8MTJ3 354 aa18.62■□□□□ 0.57
AC009163.3-201ENST00000563554 APBA3O96018 575 aa18.62■□□□□ 0.57
AC009163.3-201ENST00000563554 RUNDC1Q96C34 613 aa18.62■□□□□ 0.57
AC009163.3-201ENST00000563554 LAMB4A4D0S4 1761 aa18.62■□□□□ 0.57
AC009163.3-201ENST00000563554 QSER1Q2KHR3 1735 aa18.61■□□□□ 0.57
AC009163.3-201ENST00000563554 TMOD3Q9NYL9 352 aa18.61■□□□□ 0.57
AC009163.3-201ENST00000563554 NFE2L2Q16236 605 aa18.6■□□□□ 0.57
AC009163.3-201ENST00000563554 RNF216Q9NWF9 866 aaPredicted RBP18.6■□□□□ 0.57
AC009163.3-201ENST00000563554 RNMTO43148 476 aaKnown RBP18.59■□□□□ 0.57
AC009163.3-201ENST00000563554 DEFB132Q7Z7B7 95 aa18.59■□□□□ 0.57
AC009163.3-201ENST00000563554 FAM9BQ8IZU0 186 aa18.59■□□□□ 0.57
AC009163.3-201ENST00000563554 RTF1Q92541 710 aaKnown RBP18.59■□□□□ 0.57
AC009163.3-201ENST00000563554 ERVV-2B6SEH9 535 aa18.58■□□□□ 0.56
AC009163.3-201ENST00000563554 UBR3Q6ZT12 1888 aa18.57■□□□□ 0.56
AC009163.3-201ENST00000563554 CABP4P57796 275 aa18.57■□□□□ 0.56
AC009163.3-201ENST00000563554 EN1Q05925 392 aaPredicted RBP18.57■□□□□ 0.56
AC009163.3-201ENST00000563554 LGR6Q9HBX8 967 aa18.57■□□□□ 0.56
AC009163.3-201ENST00000563554 CEMIPQ8WUJ3 1361 aa18.56■□□□□ 0.56
AC009163.3-201ENST00000563554 TMPOP42166 694 aaKnown RBP18.56■□□□□ 0.56
AC009163.3-201ENST00000563554 PIGBQ92521 554 aa18.56■□□□□ 0.56
AC009163.3-201ENST00000563554 RRP7AQ9Y3A4 280 aaKnown RBP18.56■□□□□ 0.56
AC009163.3-201ENST00000563554 C4BP0C0L5 1744 aa18.56■□□□□ 0.56
AC009163.3-201ENST00000563554 PALLDQ8WX93 1383 aa18.55■□□□□ 0.56
AC009163.3-201ENST00000563554 TEFQ10587 303 aa18.55■□□□□ 0.56
AC009163.3-201ENST00000563554 MCM10Q7L590 875 aa18.55■□□□□ 0.56
AC009163.3-201ENST00000563554 SLC52A2Q9HAB3 445 aa18.55■□□□□ 0.56
AC009163.3-201ENST00000563554 KCPQ6ZWJ8 1503 aa18.54■□□□□ 0.56
AC009163.3-201ENST00000563554 MYH14Q7Z406 1995 aaKnown RBP18.54■□□□□ 0.56
AC009163.3-201ENST00000563554 SENP3-EIF4A1A0A087X0R7 540 aa18.54■□□□□ 0.56
AC009163.3-201ENST00000563554 PLSCR1O15162 318 aa18.54■□□□□ 0.56
AC009163.3-201ENST00000563554 HTATSF1O43719 755 aaKnown RBP18.54■□□□□ 0.56
AC009163.3-201ENST00000563554 RIPK4P57078 832 aa18.54■□□□□ 0.56
AC009163.3-201ENST00000563554 LMOD3Q0VAK6 560 aa18.54■□□□□ 0.56
AC009163.3-201ENST00000563554 NEUROD2Q15784 382 aa18.54■□□□□ 0.56
AC009163.3-201ENST00000563554 EZH2Q15910 746 aaKnown RBP18.54■□□□□ 0.56
AC009163.3-201ENST00000563554 IL17REQ8NFR9 667 aa18.54■□□□□ 0.56
AC009163.3-201ENST00000563554 DCTN1Q14203 1278 aa18.53■□□□□ 0.56
AC009163.3-201ENST00000563554 NFATC2IPQ8NCF5 419 aa18.53■□□□□ 0.56
AC009163.3-201ENST00000563554 APAF1O14727 1248 aa18.52■□□□□ 0.56
AC009163.3-201ENST00000563554 C1QBPQ07021 282 aaKnown RBP18.52■□□□□ 0.56
AC009163.3-201ENST00000563554 CAMKK2Q96RR4 588 aa18.52■□□□□ 0.56
AC009163.3-201ENST00000563554 TRIM35Q9UPQ4 493 aa18.52■□□□□ 0.56
AC009163.3-201ENST00000563554 SMARCC1Q92922 1105 aaPredicted RBP18.51■□□□□ 0.55
AC009163.3-201ENST00000563554 C4AP0C0L4 1744 aa18.51■□□□□ 0.55
AC009163.3-201ENST00000563554 ASAP1Q9ULH1 1129 aa18.5■□□□□ 0.55
AC009163.3-201ENST00000563554 TXNRD1Q16881 649 aa18.49■□□□□ 0.55
AC009163.3-201ENST00000563554 THUMPD2Q9BTF0 503 aaKnown RBP18.49■□□□□ 0.55
AC009163.3-201ENST00000563554 ATG3Q9NT62 314 aa18.49■□□□□ 0.55
AC009163.3-201ENST00000563554 CASZ1Q86V15 1759 aa18.48■□□□□ 0.55
AC009163.3-201ENST00000563554 CCNL1Q9UK58 526 aaPredicted RBP18.48■□□□□ 0.55
AC009163.3-201ENST00000563554 SLC39A6Q13433 755 aa18.46■□□□□ 0.55
AC009163.3-201ENST00000563554 TTC5Q8N0Z6 440 aa18.46■□□□□ 0.55
AC009163.3-201ENST00000563554 RBM42Q9BTD8 480 aaKnown RBP18.46■□□□□ 0.55
AC009163.3-201ENST00000563554 BTBD11A6QL63 1104 aa18.45■□□□□ 0.54
AC009163.3-201ENST00000563554 SLC27A3Q5K4L6 730 aa18.45■□□□□ 0.54
AC009163.3-201ENST00000563554 ZNF521Q96K83 1311 aa18.45■□□□□ 0.54
AC009163.3-201ENST00000563554 CACNA1FO60840 1977 aa18.44■□□□□ 0.54
AC009163.3-201ENST00000563554 LOC102724428A0A0B4J2F2 783 aa18.44■□□□□ 0.54
AC009163.3-201ENST00000563554 SIK1P57059 783 aa18.44■□□□□ 0.54
AC009163.3-201ENST00000563554 PROM2Q8N271 834 aa18.44■□□□□ 0.54
AC009163.3-201ENST00000563554 PTCD1O75127 700 aaKnown RBP18.43■□□□□ 0.54
AC009163.3-201ENST00000563554 KCNQ4P56696 695 aa18.43■□□□□ 0.54
AC009163.3-201ENST00000563554 TAF7Q15545 349 aaPredicted RBP18.43■□□□□ 0.54
AC009163.3-201ENST00000563554 ZNF790Q6PG37 636 aa18.43■□□□□ 0.54
AC009163.3-201ENST00000563554 ATP6V1AP38606 617 aa18.42■□□□□ 0.54
AC009163.3-201ENST00000563554 LRRC4BQ9NT99 713 aa18.42■□□□□ 0.54
AC009163.3-201ENST00000563554 SALL2Q9Y467 1007 aaPredicted RBP18.42■□□□□ 0.54
AC009163.3-201ENST00000563554 BCORQ6W2J9 1755 aa18.41■□□□□ 0.54
AC009163.3-201ENST00000563554 KCNQ3O43525 872 aa18.4■□□□□ 0.54
AC009163.3-201ENST00000563554 CALD1Q05682 793 aaKnown RBP18.4■□□□□ 0.54
AC009163.3-201ENST00000563554 CCDC27Q2M243 656 aa18.4■□□□□ 0.54
AC009163.3-201ENST00000563554 SLC4A9Q96Q91 983 aa18.4■□□□□ 0.54
AC009163.3-201ENST00000563554 SPINK5Q9NQ38 1064 aaPredicted RBP18.4■□□□□ 0.54
AC009163.3-201ENST00000563554 TSPYL4Q9UJ04 414 aa18.4■□□□□ 0.54
AC009163.3-201ENST00000563554 LAS1LQ9Y4W2 734 aaKnown RBP18.4■□□□□ 0.54
AC009163.3-201ENST00000563554 HEG1Q9ULI3 1381 aa18.4■□□□□ 0.54
AC009163.3-201ENST00000563554 NBPF14Q5TI25 921 aa18.39■□□□□ 0.53
AC009163.3-201ENST00000563554 ANO8Q9HCE9 1232 aaPredicted RBP18.39■□□□□ 0.53
AC009163.3-201ENST00000563554 MIS18AQ9NYP9 233 aa18.39■□□□□ 0.53
AC009163.3-201ENST00000563554 SCN7AQ01118 1682 aa18.38■□□□□ 0.53
AC009163.3-201ENST00000563554 ITPK1Q13572 414 aa18.38■□□□□ 0.53
AC009163.3-201ENST00000563554 NCBP3Q53F19 620 aaKnown RBP18.38■□□□□ 0.53
AC009163.3-201ENST00000563554 ZNF496Q96IT1 587 aaPredicted RBP18.38■□□□□ 0.53
AC009163.3-201ENST00000563554 FMNL2Q96PY5 1086 aa18.38■□□□□ 0.53
AC009163.3-201ENST00000563554 STK32BQ9NY57 414 aa18.38■□□□□ 0.53
AC009163.3-201ENST00000563554 COL24A1Q17RW2 1714 aa18.37■□□□□ 0.53
AC009163.3-201ENST00000563554 ZNF853P0CG23 659 aa18.37■□□□□ 0.53
AC009163.3-201ENST00000563554 WWC1Q8IX03 1113 aa18.37■□□□□ 0.53
AC009163.3-201ENST00000563554 NGEFQ8N5V2 710 aa18.37■□□□□ 0.53
AC009163.3-201ENST00000563554 LINC00116Q8NCU8 138 aa18.37■□□□□ 0.53
AC009163.3-201ENST00000563554 HMGB2P26583 209 aaKnown RBP18.36■□□□□ 0.53
AC009163.3-201ENST00000563554 ZNF827Q17R98 1081 aa18.36■□□□□ 0.53
AC009163.3-201ENST00000563554 NUP98P52948 1817 aa18.35■□□□□ 0.53
AC009163.3-201ENST00000563554 GNAI1P63096 354 aa18.35■□□□□ 0.53
AC009163.3-201ENST00000563554 DNAJC10Q8IXB1 793 aa18.35■□□□□ 0.53
AC009163.3-201ENST00000563554 VSIG10Q8N0Z9 540 aa18.35■□□□□ 0.53
AC009163.3-201ENST00000563554 AK7Q96M32 723 aa18.35■□□□□ 0.53
AC009163.3-201ENST00000563554 IFT57Q9NWB7 429 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms