RNA–Protein interactions for RNA: ENST00000562659.1

GSE1-212, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 2

Gene GSE1, Length 756 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-212ENST00000562659 TMOD3Q9NYL9 352 aa17.08■□□□□ 0.32
GSE1-212ENST00000562659 MCM10Q7L590 875 aa17.07■□□□□ 0.32
GSE1-212ENST00000562659 WDR63Q8IWG1 891 aa17.07■□□□□ 0.32
GSE1-212ENST00000562659 IL16Q14005 1332 aa17.06■□□□□ 0.32
GSE1-212ENST00000562659 BRWD3Q6RI45 1802 aa17.06■□□□□ 0.32
GSE1-212ENST00000562659 TAF7Q15545 349 aaPredicted RBP17.06■□□□□ 0.32
GSE1-212ENST00000562659 ILDR2Q71H61 639 aa17.06■□□□□ 0.32
GSE1-212ENST00000562659 NFATC2IPQ8NCF5 419 aa17.06■□□□□ 0.32
GSE1-212ENST00000562659 PIGBQ92521 554 aa17.06■□□□□ 0.32
GSE1-212ENST00000562659 ZNF521Q96K83 1311 aa17.05■□□□□ 0.32
GSE1-212ENST00000562659 KCNQ2O43526 872 aa17.05■□□□□ 0.32
GSE1-212ENST00000562659 TRIM37O94972 964 aa17.05■□□□□ 0.32
GSE1-212ENST00000562659 DCTN1Q14203 1278 aa17.05■□□□□ 0.32
GSE1-212ENST00000562659 SMARCC1Q92922 1105 aaPredicted RBP17.05■□□□□ 0.32
GSE1-212ENST00000562659 ACSBG1Q96GR2 724 aa17.05■□□□□ 0.32
GSE1-212ENST00000562659 SYTL4Q96C24 671 aaPredicted RBP17.04■□□□□ 0.32
GSE1-212ENST00000562659 EP400Q96L91 3159 aa17.03■□□□□ 0.32
GSE1-212ENST00000562659 PLSCR1O15162 318 aa17.03■□□□□ 0.32
GSE1-212ENST00000562659 HMGB2P26583 209 aaKnown RBP17.03■□□□□ 0.32
GSE1-212ENST00000562659 CFAP44Q96MT7 982 aa17.03■□□□□ 0.32
GSE1-212ENST00000562659 IFT57Q9NWB7 429 aa17.03■□□□□ 0.32
GSE1-212ENST00000562659 CHL1O00533 1208 aa17.02■□□□□ 0.32
GSE1-212ENST00000562659 ABCB7O75027 752 aa17.02■□□□□ 0.32
GSE1-212ENST00000562659 ZNF853P0CG23 659 aa17.02■□□□□ 0.32
GSE1-212ENST00000562659 THUMPD2Q9BTF0 503 aaKnown RBP17.02■□□□□ 0.32
GSE1-212ENST00000562659 ZNF219Q9P2Y4 722 aaPredicted RBP17.02■□□□□ 0.32
GSE1-212ENST00000562659 BTBD11A6QL63 1104 aa17.01■□□□□ 0.31
GSE1-212ENST00000562659 GNAI1P63096 354 aa17.01■□□□□ 0.31
GSE1-212ENST00000562659 ATG3Q9NT62 314 aa17.01■□□□□ 0.31
GSE1-212ENST00000562659 NHSQ6T4R5 1651 aa17.01■□□□□ 0.31
GSE1-212ENST00000562659 HNRNPUQ00839 825 aaKnown RBP eCLIP17■□□□□ 0.31
GSE1-212ENST00000562659 SF3B2Q13435 895 aaKnown RBP17■□□□□ 0.31
GSE1-212ENST00000562659 ZNF790Q6PG37 636 aa17■□□□□ 0.31
GSE1-212ENST00000562659 PTF1AQ7RTS3 328 aa17■□□□□ 0.31
GSE1-212ENST00000562659 UPF1Q92900 1129 aaKnown RBP eCLIP16.99■□□□□ 0.31
GSE1-212ENST00000562659 ASAP1Q9ULH1 1129 aa16.99■□□□□ 0.31
GSE1-212ENST00000562659 SCN11AQ9UI33 1791 aa16.99■□□□□ 0.31
GSE1-212ENST00000562659 TOGARAM1Q9Y4F4 1720 aa16.99■□□□□ 0.31
GSE1-212ENST00000562659 ZBED9Q6R2W3 1325 aa16.98■□□□□ 0.31
GSE1-212ENST00000562659 APBA3O96018 575 aa16.98■□□□□ 0.31
GSE1-212ENST00000562659 VSIG10Q8N0Z9 540 aa16.98■□□□□ 0.31
GSE1-212ENST00000562659 BAG6P46379 1132 aa16.97■□□□□ 0.31
GSE1-212ENST00000562659 GOLGA2Q08379 1002 aa16.97■□□□□ 0.31
GSE1-212ENST00000562659 TTC5Q8N0Z6 440 aa16.97■□□□□ 0.31
GSE1-212ENST00000562659 TSPYL4Q9UJ04 414 aa16.97■□□□□ 0.31
GSE1-212ENST00000562659 SALL2Q9Y467 1007 aaPredicted RBP16.97■□□□□ 0.31
GSE1-212ENST00000562659 PALLDQ8WX93 1383 aa16.97■□□□□ 0.31
GSE1-212ENST00000562659 DOT1LQ8TEK3 1739 aa16.96■□□□□ 0.31
GSE1-212ENST00000562659 E9PSI1 815 aa16.96■□□□□ 0.31
GSE1-212ENST00000562659 SLC27A3Q5K4L6 730 aa16.96■□□□□ 0.31
GSE1-212ENST00000562659 MYH16Q9H6N6 1097 aa16.96■□□□□ 0.31
GSE1-212ENST00000562659 FMNL2Q96PY5 1086 aa16.95■□□□□ 0.3
GSE1-212ENST00000562659 SBF2Q86WG5 1849 aa16.94■□□□□ 0.3
GSE1-212ENST00000562659 HEG1Q9ULI3 1381 aa16.94■□□□□ 0.3
GSE1-212ENST00000562659 LOC102724428A0A0B4J2F2 783 aa16.94■□□□□ 0.3
GSE1-212ENST00000562659 SIK1P57059 783 aa16.94■□□□□ 0.3
GSE1-212ENST00000562659 EIF4A1P60842 406 aaKnown RBP16.94■□□□□ 0.3
GSE1-212ENST00000562659 SLC39A6Q13433 755 aa16.94■□□□□ 0.3
GSE1-212ENST00000562659 TRMT2AQ8IZ69 625 aaKnown RBP16.94■□□□□ 0.3
GSE1-212ENST00000562659 CAMKK2Q96RR4 588 aa16.94■□□□□ 0.3
GSE1-212ENST00000562659 TEX13AQ9BXU3 409 aaPredicted RBP16.94■□□□□ 0.3
GSE1-212ENST00000562659 MBIPQ9NS73 344 aa16.94■□□□□ 0.3
GSE1-212ENST00000562659 DLG5Q8TDM6 1919 aa16.94■□□□□ 0.3
GSE1-212ENST00000562659 SOS1Q07889 1333 aaPredicted RBP16.94■□□□□ 0.3
GSE1-212ENST00000562659 SLFN5Q08AF3 891 aa16.93■□□□□ 0.3
GSE1-212ENST00000562659 ZNF496Q96IT1 587 aaPredicted RBP16.93■□□□□ 0.3
GSE1-212ENST00000562659 MIS18AQ9NYP9 233 aa16.93■□□□□ 0.3
GSE1-212ENST00000562659 SENP3-EIF4A1A0A087X0R7 540 aa16.92■□□□□ 0.3
GSE1-212ENST00000562659 HOXB7P09629 217 aa16.92■□□□□ 0.3
GSE1-212ENST00000562659 SNRPA1P09661 255 aaKnown RBP16.92■□□□□ 0.3
GSE1-212ENST00000562659 TXNRD1Q16881 649 aa16.92■□□□□ 0.3
GSE1-212ENST00000562659 CHMP4AQ9BY43 222 aa16.92■□□□□ 0.3
GSE1-212ENST00000562659 LAS1LQ9Y4W2 734 aaKnown RBP16.92■□□□□ 0.3
GSE1-212ENST00000562659 KCNQ3O43525 872 aa16.91■□□□□ 0.3
GSE1-212ENST00000562659 PROM2Q8N271 834 aa16.91■□□□□ 0.3
GSE1-212ENST00000562659 SIPA1L3O60292 1781 aaPredicted RBP16.91■□□□□ 0.3
GSE1-212ENST00000562659 KCPQ6ZWJ8 1503 aa16.91■□□□□ 0.3
GSE1-212ENST00000562659 PTCD1O75127 700 aaKnown RBP16.9■□□□□ 0.3
GSE1-212ENST00000562659 GIGYF1O75420 1035 aaPredicted RBP16.9■□□□□ 0.3
GSE1-212ENST00000562659 SLC4A9Q96Q91 983 aa16.9■□□□□ 0.3
GSE1-212ENST00000562659 CCNL1Q9UK58 526 aaPredicted RBP16.9■□□□□ 0.3
GSE1-212ENST00000562659 ITGB4P16144 1822 aa16.9■□□□□ 0.3
GSE1-212ENST00000562659 FANCIQ9NVI1 1328 aa16.9■□□□□ 0.3
GSE1-212ENST00000562659 PAPPAQ13219 1627 aa16.89■□□□□ 0.29
GSE1-212ENST00000562659 ATP6V1AP38606 617 aa16.89■□□□□ 0.29
GSE1-212ENST00000562659 EN1Q05925 392 aaPredicted RBP16.89■□□□□ 0.29
GSE1-212ENST00000562659 RBM42Q9BTD8 480 aaKnown RBP16.89■□□□□ 0.29
GSE1-212ENST00000562659 TNS1Q9HBL0 1735 aaKnown RBP16.89■□□□□ 0.29
GSE1-212ENST00000562659 BTAF1O14981 1849 aa16.89■□□□□ 0.29
GSE1-212ENST00000562659 RGPD3A6NKT7 1758 aaPredicted RBP16.88■□□□□ 0.29
GSE1-212ENST00000562659 RGPD4Q7Z3J3 1758 aa16.88■□□□□ 0.29
GSE1-212ENST00000562659 ZNF831Q5JPB2 1677 aa16.88■□□□□ 0.29
GSE1-212ENST00000562659 SOCS7O14512 581 aa16.87■□□□□ 0.29
GSE1-212ENST00000562659 STARD3NLO95772 234 aa16.87■□□□□ 0.29
GSE1-212ENST00000562659 CT47B1P0C2W7 299 aaPredicted RBP16.87■□□□□ 0.29
GSE1-212ENST00000562659 EZH2Q15910 746 aaKnown RBP16.87■□□□□ 0.29
GSE1-212ENST00000562659 RC3H1Q5TC82 1133 aaKnown RBP16.87■□□□□ 0.29
GSE1-212ENST00000562659 DUSP27Q5VZP5 1158 aa16.87■□□□□ 0.29
GSE1-212ENST00000562659 DEFB132Q7Z7B7 95 aa16.87■□□□□ 0.29
GSE1-212ENST00000562659 TSR2Q969E8 191 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms