RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 OVOS2A0A0G2JMS6 1433 aa12.26□□□□□ -0.45
SMG1-205ENST00000561947 AXIN2Q9Y2T1 843 aa12.26□□□□□ -0.45
SMG1-205ENST00000561947 BECN1Q14457 450 aa12.25□□□□□ -0.45
SMG1-205ENST00000561947 XIRP1Q702N8 1843 aaKnown RBP12.25□□□□□ -0.45
SMG1-205ENST00000561947 LMTK3Q96Q04 1460 aa12.25□□□□□ -0.45
SMG1-205ENST00000561947 MFAP1P55081 439 aaKnown RBP12.25□□□□□ -0.45
SMG1-205ENST00000561947 FKBP5Q13451 457 aaPredicted RBP12.25□□□□□ -0.45
SMG1-205ENST00000561947 NECTIN2Q92692 538 aa12.25□□□□□ -0.45
SMG1-205ENST00000561947 COL18A1P39060 1754 aa12.25□□□□□ -0.45
SMG1-205ENST00000561947 CRYBG1Q9Y4K1 1723 aa12.25□□□□□ -0.45
SMG1-205ENST00000561947 EIF4A1P60842 406 aaKnown RBP12.24□□□□□ -0.45
SMG1-205ENST00000561947 RTL5Q5HYW3 569 aaPredicted RBP12.24□□□□□ -0.45
SMG1-205ENST00000561947 HDGFL1Q5TGJ6 251 aa12.24□□□□□ -0.45
SMG1-205ENST00000561947 CADPS2Q86UW7 1296 aa12.24□□□□□ -0.45
SMG1-205ENST00000561947 SIPA1L3O60292 1781 aaPredicted RBP12.24□□□□□ -0.45
SMG1-205ENST00000561947 ERBB3P21860 1342 aa12.24□□□□□ -0.45
SMG1-205ENST00000561947 ADAMTS7Q9UKP4 1686 aa12.24□□□□□ -0.45
SMG1-205ENST00000561947 HOXB7P09629 217 aa12.24□□□□□ -0.45
SMG1-205ENST00000561947 TEFQ10587 303 aa12.24□□□□□ -0.45
SMG1-205ENST00000561947 C1orf141Q5JVX7 400 aa12.24□□□□□ -0.45
SMG1-205ENST00000561947 C22orf23Q9BZE7 217 aa12.24□□□□□ -0.45
SMG1-205ENST00000561947 RNMTO43148 476 aaKnown RBP12.24□□□□□ -0.45
SMG1-205ENST00000561947 HSPA2P54652 639 aa12.24□□□□□ -0.45
SMG1-205ENST00000561947 NPHP3Q7Z494 1330 aa12.23□□□□□ -0.45
SMG1-205ENST00000561947 TNS3Q68CZ2 1445 aa12.23□□□□□ -0.45
SMG1-205ENST00000561947 ZC3H6P61129 1189 aaKnown RBP12.23□□□□□ -0.45
SMG1-205ENST00000561947 MPRIPQ6WCQ1 1025 aa12.23□□□□□ -0.45
SMG1-205ENST00000561947 DDX17Q92841 729 aaKnown RBP12.23□□□□□ -0.45
SMG1-205ENST00000561947 ABCC6O95255 1503 aa12.23□□□□□ -0.45
SMG1-205ENST00000561947 HMMRO75330 724 aa12.23□□□□□ -0.45
SMG1-205ENST00000561947 BTBD11A6QL63 1104 aa12.22□□□□□ -0.45
SMG1-205ENST00000561947 GNAI2P04899 355 aa12.22□□□□□ -0.45
SMG1-205ENST00000561947 PLEKHM2Q8IWE5 1019 aa12.22□□□□□ -0.45
SMG1-205ENST00000561947 CHMP4AQ9BY43 222 aa12.22□□□□□ -0.45
SMG1-205ENST00000561947 USP35Q9P2H5 1018 aa12.22□□□□□ -0.45
SMG1-205ENST00000561947 KCNQ3O43525 872 aa12.21□□□□□ -0.45
SMG1-205ENST00000561947 GNAI3P08754 354 aa12.21□□□□□ -0.45
SMG1-205ENST00000561947 STRCQ7RTU9 1775 aa12.21□□□□□ -0.45
SMG1-205ENST00000561947 SCN11AQ9UI33 1791 aa12.2□□□□□ -0.46
SMG1-205ENST00000561947 EIF2S2P20042 333 aaKnown RBP12.2□□□□□ -0.46
SMG1-205ENST00000561947 PHAXQ9H814 394 aaKnown RBP12.2□□□□□ -0.46
SMG1-205ENST00000561947 GSPT1P15170 499 aaKnown RBP12.19□□□□□ -0.46
SMG1-205ENST00000561947 TTC22Q5TAA0 569 aa12.19□□□□□ -0.46
SMG1-205ENST00000561947 TBC1D9Q6ZT07 1266 aa12.19□□□□□ -0.46
SMG1-205ENST00000561947 SPATA31A3Q5VYP0 1347 aa12.19□□□□□ -0.46
SMG1-205ENST00000561947 CDC45O75419 566 aa12.19□□□□□ -0.46
SMG1-205ENST00000561947 RBM25P49756 843 aaKnown RBP12.19□□□□□ -0.46
SMG1-205ENST00000561947 C16orf71Q8IYS4 520 aaPredicted RBP12.19□□□□□ -0.46
SMG1-205ENST00000561947 TBC1D2Q9BYX2 928 aa12.19□□□□□ -0.46
SMG1-205ENST00000561947 RAPGEF4Q8WZA2 1011 aa12.18□□□□□ -0.46
SMG1-205ENST00000561947 NLRP2Q9NX02 1062 aa12.18□□□□□ -0.46
SMG1-205ENST00000561947 CHPF2Q9P2E5 772 aa12.18□□□□□ -0.46
SMG1-205ENST00000561947 HEG1Q9ULI3 1381 aa12.18□□□□□ -0.46
SMG1-205ENST00000561947 SMARCA5O60264 1052 aaPredicted RBP12.18□□□□□ -0.46
SMG1-205ENST00000561947 ATP8B2P98198 1209 aa12.17□□□□□ -0.46
SMG1-205ENST00000561947 CABLES1Q8TDN4 633 aa12.17□□□□□ -0.46
SMG1-205ENST00000561947 OTUD7AQ8TE49 926 aaPredicted RBP12.17□□□□□ -0.46
SMG1-205ENST00000561947 PLEKHG2Q9H7P9 1386 aa12.17□□□□□ -0.46
SMG1-205ENST00000561947 MEGF6O75095 1541 aa12.17□□□□□ -0.46
SMG1-205ENST00000561947 APBB1O00213 710 aa12.17□□□□□ -0.46
SMG1-205ENST00000561947 TATP17735 454 aaPredicted RBP12.17□□□□□ -0.46
SMG1-205ENST00000561947 NFKBIBQ15653 356 aa12.17□□□□□ -0.46
SMG1-205ENST00000561947 USP44Q9H0E7 712 aa12.17□□□□□ -0.46
SMG1-205ENST00000561947 PKD1L3Q7Z443 1732 aa12.17□□□□□ -0.46
SMG1-205ENST00000561947 CPDO75976 1380 aa12.17□□□□□ -0.46
SMG1-205ENST00000561947 SRCIN1Q9C0H9 1055 aa12.16□□□□□ -0.46
SMG1-205ENST00000561947 LRRFIP2Q9Y608 721 aaKnown RBP12.16□□□□□ -0.46
SMG1-205ENST00000561947 GIGYF1O75420 1035 aaPredicted RBP12.16□□□□□ -0.46
SMG1-205ENST00000561947 UBTFL1P0CB47 393 aaPredicted RBP12.16□□□□□ -0.46
SMG1-205ENST00000561947 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.16□□□□□ -0.468e-9■■■■□ 21.1
SMG1-205ENST00000561947 KDM6AO15550 1401 aaPredicted RBP12.16□□□□□ -0.46
SMG1-205ENST00000561947 PNMA6EA0A0J9YXQ4 647 aa12.15□□□□□ -0.46
SMG1-205ENST00000561947 EIF5BO60841 1220 aaKnown RBP12.15□□□□□ -0.46
SMG1-205ENST00000561947 BRINP3Q76B58 766 aa12.15□□□□□ -0.46
SMG1-205ENST00000561947 DNAAF4Q8WXU2 420 aa12.15□□□□□ -0.46
SMG1-205ENST00000561947 DBF4Q9UBU7 674 aaPredicted RBP12.15□□□□□ -0.46
SMG1-205ENST00000561947 SPG7Q9UQ90 795 aa12.15□□□□□ -0.46
SMG1-205ENST00000561947 CSB-PGBD3P0DP91 1061 aa12.15□□□□□ -0.46
SMG1-205ENST00000561947 BCL11AQ9H165 835 aa12.15□□□□□ -0.46
SMG1-205ENST00000561947 ADCY9O60503 1353 aa12.15□□□□□ -0.47
SMG1-205ENST00000561947 PHKG2P15735 406 aa12.14□□□□□ -0.47
SMG1-205ENST00000561947 CHRNA2Q15822 529 aa12.14□□□□□ -0.47
SMG1-205ENST00000561947 EXOC6BQ9Y2D4 811 aa12.14□□□□□ -0.47
SMG1-205ENST00000561947 TUBGCP6Q96RT7 1819 aa12.14□□□□□ -0.47
SMG1-205ENST00000561947 IBTKQ9P2D0 1353 aaPredicted RBP12.14□□□□□ -0.47
SMG1-205ENST00000561947 PI4KAP2A4QPH2 592 aa12.14□□□□□ -0.47
SMG1-205ENST00000561947 ANXA1P04083 346 aa12.14□□□□□ -0.47
SMG1-205ENST00000561947 BEND3Q5T5X7 828 aa12.14□□□□□ -0.47
SMG1-205ENST00000561947 PI4KAP1Q8N8J0 262 aa12.14□□□□□ -0.47
SMG1-205ENST00000561947 OSBPL3Q9H4L5 887 aa12.14□□□□□ -0.47
SMG1-205ENST00000561947 C5P01031 1676 aa12.14□□□□□ -0.47
SMG1-205ENST00000561947 DEKP35659 375 aaKnown RBP12.14□□□□□ -0.47
SMG1-205ENST00000561947 ANTXR1Q9H6X2 564 aa12.14□□□□□ -0.47
SMG1-205ENST00000561947 MRC1P22897 1456 aa12.13□□□□□ -0.47
SMG1-205ENST00000561947 KDM4FA0A1W2PPD8 638 aa12.13□□□□□ -0.47
SMG1-205ENST00000561947 LRRCC1Q9C099 1032 aa12.13□□□□□ -0.47
SMG1-205ENST00000561947 SLKQ9H2G2 1235 aaPredicted RBP12.13□□□□□ -0.47
SMG1-205ENST00000561947 SLC52A2Q9HAB3 445 aa12.13□□□□□ -0.47
SMG1-205ENST00000561947 SDSP20132 328 aa12.13□□□□□ -0.47
SMG1-205ENST00000561947 IFNL2Q8IZJ0 200 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms