RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 SGIP1Q9BQI5 828 aa20.67■□□□□ 0.9
RABGGTA-219ENST00000560871 PALLDQ8WX93 1383 aa20.67■□□□□ 0.9
RABGGTA-219ENST00000560871 ERVV-2B6SEH9 535 aa20.66■□□□□ 0.9
RABGGTA-219ENST00000560871 SMARCC1Q92922 1105 aaPredicted RBP20.66■□□□□ 0.9
RABGGTA-219ENST00000560871 PNPLA7Q6ZV29 1317 aa20.66■□□□□ 0.9
RABGGTA-219ENST00000560871 MAP3K5Q99683 1374 aa20.66■□□□□ 0.9
RABGGTA-219ENST00000560871 VIRMAQ69YN4 1812 aaKnown RBP20.66■□□□□ 0.9
RABGGTA-219ENST00000560871 SLC16A10Q8TF71 515 aa20.65■□□□□ 0.9
RABGGTA-219ENST00000560871 PLEKHF1Q96S99 279 aa20.65■□□□□ 0.9
RABGGTA-219ENST00000560871 TMOD3Q9NYL9 352 aa20.65■□□□□ 0.9
RABGGTA-219ENST00000560871 ANP32CO43423 234 aa20.64■□□□□ 0.89
RABGGTA-219ENST00000560871 TFCP2L1Q9NZI6 479 aa20.64■□□□□ 0.89
RABGGTA-219ENST00000560871 HMGB2P26583 209 aaKnown RBP20.63■□□□□ 0.89
RABGGTA-219ENST00000560871 RNMTO43148 476 aaKnown RBP20.62■□□□□ 0.89
RABGGTA-219ENST00000560871 LGR6Q9HBX8 967 aa20.62■□□□□ 0.89
RABGGTA-219ENST00000560871 C4BP0C0L5 1744 aa20.61■□□□□ 0.89
RABGGTA-219ENST00000560871 CEMIPQ8WUJ3 1361 aa20.6■□□□□ 0.89
RABGGTA-219ENST00000560871 SIPA1L3O60292 1781 aaPredicted RBP20.6■□□□□ 0.89
RABGGTA-219ENST00000560871 GNAT3A8MTJ3 354 aa20.6■□□□□ 0.89
RABGGTA-219ENST00000560871 CABP4P57796 275 aa20.6■□□□□ 0.89
RABGGTA-219ENST00000560871 CCDC184Q52MB2 194 aa20.6■□□□□ 0.89
RABGGTA-219ENST00000560871 ATG3Q9NT62 314 aa20.6■□□□□ 0.89
RABGGTA-219ENST00000560871 ZNF831Q5JPB2 1677 aa20.59■□□□□ 0.89
RABGGTA-219ENST00000560871 SLC52A2Q9HAB3 445 aa20.59■□□□□ 0.89
RABGGTA-219ENST00000560871 ASAP1Q9ULH1 1129 aa20.59■□□□□ 0.89
RABGGTA-219ENST00000560871 UBR3Q6ZT12 1888 aa20.58■□□□□ 0.89
RABGGTA-219ENST00000560871 CICQ96RK0 1608 aaPredicted RBP20.58■□□□□ 0.89
RABGGTA-219ENST00000560871 COL23A1Q86Y22 540 aaPredicted RBP20.58■□□□□ 0.89
RABGGTA-219ENST00000560871 NFATC2IPQ8NCF5 419 aa20.58■□□□□ 0.89
RABGGTA-219ENST00000560871 IL17REQ8NFR9 667 aa20.58■□□□□ 0.89
RABGGTA-219ENST00000560871 ARXQ96QS3 562 aa20.58■□□□□ 0.89
RABGGTA-219ENST00000560871 LOC102724428A0A0B4J2F2 783 aa20.57■□□□□ 0.88
RABGGTA-219ENST00000560871 SIK1P57059 783 aa20.57■□□□□ 0.88
RABGGTA-219ENST00000560871 WDR43Q15061 677 aaKnown RBP eCLIP20.57■□□□□ 0.88
RABGGTA-219ENST00000560871 FHDC1Q9C0D6 1143 aaPredicted RBP20.57■□□□□ 0.88
RABGGTA-219ENST00000560871 PNNQ9H307 717 aaKnown RBP20.57■□□□□ 0.88
RABGGTA-219ENST00000560871 DLG5Q8TDM6 1919 aa20.57■□□□□ 0.88
RABGGTA-219ENST00000560871 SYT17Q9BSW7 474 aa20.56■□□□□ 0.88
RABGGTA-219ENST00000560871 ADAMTS8Q9UP79 889 aa20.56■□□□□ 0.88
RABGGTA-219ENST00000560871 MAPK8IP3Q9UPT6 1336 aa20.55■□□□□ 0.88
RABGGTA-219ENST00000560871 KCPQ6ZWJ8 1503 aa20.55■□□□□ 0.88
RABGGTA-219ENST00000560871 UBR2Q8IWV8 1755 aa20.54■□□□□ 0.88
RABGGTA-219ENST00000560871 NEFMP07197 916 aa20.54■□□□□ 0.88
RABGGTA-219ENST00000560871 NFE2L2Q16236 605 aa20.54■□□□□ 0.88
RABGGTA-219ENST00000560871 FLAD1Q8NFF5 587 aa20.54■□□□□ 0.88
RABGGTA-219ENST00000560871 HTATSF1O43719 755 aaKnown RBP20.53■□□□□ 0.88
RABGGTA-219ENST00000560871 SLC4A9Q96Q91 983 aa20.53■□□□□ 0.88
RABGGTA-219ENST00000560871 COL5A3P25940 1745 aaPredicted RBP20.53■□□□□ 0.88
RABGGTA-219ENST00000560871 MSH5O43196 834 aa20.52■□□□□ 0.88
RABGGTA-219ENST00000560871 POLD1P28340 1107 aa20.52■□□□□ 0.88
RABGGTA-219ENST00000560871 ATP6V1AP38606 617 aa20.52■□□□□ 0.88
RABGGTA-219ENST00000560871 ITPK1Q13572 414 aa20.52■□□□□ 0.88
RABGGTA-219ENST00000560871 CCDC146Q8IYE0 955 aa20.52■□□□□ 0.88
RABGGTA-219ENST00000560871 LINC00116Q8NCU8 138 aa20.52■□□□□ 0.88
RABGGTA-219ENST00000560871 TJP1Q07157 1748 aa20.52■□□□□ 0.88
RABGGTA-219ENST00000560871 DCAF8L1A6NGE4 600 aa20.51■□□□□ 0.87
RABGGTA-219ENST00000560871 MCM10Q7L590 875 aa20.51■□□□□ 0.87
RABGGTA-219ENST00000560871 RUNDC1Q96C34 613 aa20.51■□□□□ 0.87
RABGGTA-219ENST00000560871 AK7Q96M32 723 aa20.51■□□□□ 0.87
RABGGTA-219ENST00000560871 MRS2Q9HD23 443 aa20.51■□□□□ 0.87
RABGGTA-219ENST00000560871 TEFQ10587 303 aa20.5■□□□□ 0.87
RABGGTA-219ENST00000560871 DCTN1Q14203 1278 aa20.5■□□□□ 0.87
RABGGTA-219ENST00000560871 AMIGO3Q86WK7 504 aa20.5■□□□□ 0.87
RABGGTA-219ENST00000560871 PNISRQ8TF01 805 aaKnown RBP20.49■□□□□ 0.87
RABGGTA-219ENST00000560871 RTF1Q92541 710 aaKnown RBP20.49■□□□□ 0.87
RABGGTA-219ENST00000560871 TMPOP42166 694 aaKnown RBP20.48■□□□□ 0.87
RABGGTA-219ENST00000560871 SLC39A6Q13433 755 aa20.48■□□□□ 0.87
RABGGTA-219ENST00000560871 SSFA2P28290 1259 aa20.47■□□□□ 0.87
RABGGTA-219ENST00000560871 SMIM5Q71RC9 77 aa20.47■□□□□ 0.87
RABGGTA-219ENST00000560871 RBM42Q9BTD8 480 aaKnown RBP20.47■□□□□ 0.87
RABGGTA-219ENST00000560871 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.46■□□□□ 0.87
RABGGTA-219ENST00000560871 PTCD1O75127 700 aaKnown RBP20.46■□□□□ 0.87
RABGGTA-219ENST00000560871 MSL1Q68DK7 614 aa20.46■□□□□ 0.87
RABGGTA-219ENST00000560871 PHF14O94880 888 aa20.45■□□□□ 0.86
RABGGTA-219ENST00000560871 RIPK4P57078 832 aa20.45■□□□□ 0.86
RABGGTA-219ENST00000560871 MYH14Q7Z406 1995 aaKnown RBP20.45■□□□□ 0.86
RABGGTA-219ENST00000560871 KDM3BQ7LBC6 1761 aa20.44■□□□□ 0.86
RABGGTA-219ENST00000560871 GNPATO15228 680 aa20.44■□□□□ 0.86
RABGGTA-219ENST00000560871 RC3H1Q5TC82 1133 aaKnown RBP20.44■□□□□ 0.86
RABGGTA-219ENST00000560871 ZNF790Q6PG37 636 aa20.44■□□□□ 0.86
RABGGTA-219ENST00000560871 THUMPD2Q9BTF0 503 aaKnown RBP20.44■□□□□ 0.86
RABGGTA-219ENST00000560871 RRP7AQ9Y3A4 280 aaKnown RBP20.44■□□□□ 0.86
RABGGTA-219ENST00000560871 BTBD11A6QL63 1104 aa20.42■□□□□ 0.86
RABGGTA-219ENST00000560871 LMOD3Q0VAK6 560 aa20.42■□□□□ 0.86
RABGGTA-219ENST00000560871 KLHL34Q8N239 644 aa20.42■□□□□ 0.86
RABGGTA-219ENST00000560871 CNTNAP4Q9C0A0 1308 aa20.42■□□□□ 0.86
RABGGTA-219ENST00000560871 KCNQ3O43525 872 aa20.41■□□□□ 0.86
RABGGTA-219ENST00000560871 TTC5Q8N0Z6 440 aa20.41■□□□□ 0.86
RABGGTA-219ENST00000560871 ZNF496Q96IT1 587 aaPredicted RBP20.41■□□□□ 0.86
RABGGTA-219ENST00000560871 TRIM35Q9UPQ4 493 aa20.41■□□□□ 0.86
RABGGTA-219ENST00000560871 HEG1Q9ULI3 1381 aa20.41■□□□□ 0.86
RABGGTA-219ENST00000560871 CHD4Q14839 1912 aa20.4■□□□□ 0.86
RABGGTA-219ENST00000560871 TAF7Q15545 349 aaPredicted RBP20.4■□□□□ 0.86
RABGGTA-219ENST00000560871 VSIG10Q8N0Z9 540 aa20.4■□□□□ 0.86
RABGGTA-219ENST00000560871 APAF1O14727 1248 aa20.39■□□□□ 0.85
RABGGTA-219ENST00000560871 YY1P25490 414 aa20.39■□□□□ 0.85
RABGGTA-219ENST00000560871 DNAJC10Q8IXB1 793 aa20.39■□□□□ 0.85
RABGGTA-219ENST00000560871 NLGN2Q8NFZ4 835 aa20.39■□□□□ 0.85
RABGGTA-219ENST00000560871 RTCBQ9Y3I0 505 aaKnown RBP20.39■□□□□ 0.85
RABGGTA-219ENST00000560871 RPS6KA4O75676 772 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms