RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 APBA3O96018 575 aa16.03■□□□□ 0.16
USP8-209ENST00000560297 THUMPD2Q9BTF0 503 aaKnown RBP16.03■□□□□ 0.16
USP8-209ENST00000560297 SENP3-EIF4A1A0A087X0R7 540 aa16.02■□□□□ 0.16
USP8-209ENST00000560297 PLSCR1O15162 318 aa16.02■□□□□ 0.16
USP8-209ENST00000560297 PTF1AQ7RTS3 328 aa16.02■□□□□ 0.16
USP8-209ENST00000560297 UPF1Q92900 1129 aaKnown RBP eCLIP16.02■□□□□ 0.16
USP8-209ENST00000560297 IL16Q14005 1332 aa16.01■□□□□ 0.15
USP8-209ENST00000560297 HNRNPUQ00839 825 aaKnown RBP eCLIP16.01■□□□□ 0.15
USP8-209ENST00000560297 CHL1O00533 1208 aa16■□□□□ 0.15
USP8-209ENST00000560297 HMGB2P26583 209 aaKnown RBP16■□□□□ 0.15
USP8-209ENST00000560297 BAG6P46379 1132 aa16■□□□□ 0.15
USP8-209ENST00000560297 GNAI1P63096 354 aa16■□□□□ 0.15
USP8-209ENST00000560297 CFAP44Q96MT7 982 aa16■□□□□ 0.15
USP8-209ENST00000560297 ATG3Q9NT62 314 aa16■□□□□ 0.15
USP8-209ENST00000560297 ASAP1Q9ULH1 1129 aa16■□□□□ 0.15
USP8-209ENST00000560297 ADAMTS7Q9UKP4 1686 aa15.99■□□□□ 0.15
USP8-209ENST00000560297 MRC1P22897 1456 aa15.99■□□□□ 0.15
USP8-209ENST00000560297 ZNF790Q6PG37 636 aa15.99■□□□□ 0.15
USP8-209ENST00000560297 TTC5Q8N0Z6 440 aa15.99■□□□□ 0.15
USP8-209ENST00000560297 IFT57Q9NWB7 429 aa15.99■□□□□ 0.15
USP8-209ENST00000560297 KAT6BQ8WYB5 2073 aa15.98■□□□□ 0.15
USP8-209ENST00000560297 ZNF853P0CG23 659 aa15.98■□□□□ 0.15
USP8-209ENST00000560297 TSPYL4Q9UJ04 414 aa15.98■□□□□ 0.15
USP8-209ENST00000560297 LAS1LQ9Y4W2 734 aaKnown RBP15.98■□□□□ 0.15
USP8-209ENST00000560297 ZNF521Q96K83 1311 aa15.97■□□□□ 0.15
USP8-209ENST00000560297 GOLGA2Q08379 1002 aa15.97■□□□□ 0.15
USP8-209ENST00000560297 SLC39A6Q13433 755 aa15.97■□□□□ 0.15
USP8-209ENST00000560297 MIS18AQ9NYP9 233 aa15.97■□□□□ 0.15
USP8-209ENST00000560297 SCN11AQ9UI33 1791 aa15.97■□□□□ 0.15
USP8-209ENST00000560297 NHSQ6T4R5 1651 aa15.96■□□□□ 0.15
USP8-209ENST00000560297 SLC27A3Q5K4L6 730 aa15.96■□□□□ 0.15
USP8-209ENST00000560297 PALLDQ8WX93 1383 aa15.96■□□□□ 0.15
USP8-209ENST00000560297 EP400Q96L91 3159 aa15.95■□□□□ 0.14
USP8-209ENST00000560297 DOT1LQ8TEK3 1739 aa15.95■□□□□ 0.14
USP8-209ENST00000560297 LOC102724428A0A0B4J2F2 783 aa15.95■□□□□ 0.14
USP8-209ENST00000560297 PTCD1O75127 700 aaKnown RBP15.95■□□□□ 0.14
USP8-209ENST00000560297 SIK1P57059 783 aa15.95■□□□□ 0.14
USP8-209ENST00000560297 FMNL2Q96PY5 1086 aa15.95■□□□□ 0.14
USP8-209ENST00000560297 CAMKK2Q96RR4 588 aa15.95■□□□□ 0.14
USP8-209ENST00000560297 RBM42Q9BTD8 480 aaKnown RBP15.95■□□□□ 0.14
USP8-209ENST00000560297 MYH16Q9H6N6 1097 aa15.95■□□□□ 0.14
USP8-209ENST00000560297 DLG5Q8TDM6 1919 aa15.95■□□□□ 0.14
USP8-209ENST00000560297 TOGARAM1Q9Y4F4 1720 aa15.94■□□□□ 0.14
USP8-209ENST00000560297 SBF2Q86WG5 1849 aa15.94■□□□□ 0.14
USP8-209ENST00000560297 E9PSI1 815 aa15.94■□□□□ 0.14
USP8-209ENST00000560297 EN1Q05925 392 aaPredicted RBP15.94■□□□□ 0.14
USP8-209ENST00000560297 VSIG10Q8N0Z9 540 aa15.94■□□□□ 0.14
USP8-209ENST00000560297 KCNQ3O43525 872 aa15.93■□□□□ 0.14
USP8-209ENST00000560297 EIF4A1P60842 406 aaKnown RBP15.93■□□□□ 0.14
USP8-209ENST00000560297 TXNRD1Q16881 649 aa15.93■□□□□ 0.14
USP8-209ENST00000560297 ZNF496Q96IT1 587 aaPredicted RBP15.93■□□□□ 0.14
USP8-209ENST00000560297 TEX13AQ9BXU3 409 aaPredicted RBP15.93■□□□□ 0.14
USP8-209ENST00000560297 MBIPQ9NS73 344 aa15.93■□□□□ 0.14
USP8-209ENST00000560297 CCNL1Q9UK58 526 aaPredicted RBP15.93■□□□□ 0.14
USP8-209ENST00000560297 ZBED9Q6R2W3 1325 aa15.93■□□□□ 0.14
USP8-209ENST00000560297 ITGB4P16144 1822 aa15.92■□□□□ 0.14
USP8-209ENST00000560297 ATP6V1AP38606 617 aa15.92■□□□□ 0.14
USP8-209ENST00000560297 DEFB132Q7Z7B7 95 aa15.92■□□□□ 0.14
USP8-209ENST00000560297 PROM2Q8N271 834 aa15.92■□□□□ 0.14
USP8-209ENST00000560297 SOCS7O14512 581 aa15.91■□□□□ 0.14
USP8-209ENST00000560297 SNRPA1P09661 255 aaKnown RBP15.91■□□□□ 0.14
USP8-209ENST00000560297 SLFN5Q08AF3 891 aa15.91■□□□□ 0.14
USP8-209ENST00000560297 EZH2Q15910 746 aaKnown RBP15.91■□□□□ 0.14
USP8-209ENST00000560297 CHMP4AQ9BY43 222 aa15.9■□□□□ 0.14
USP8-209ENST00000560297 SPINK5Q9NQ38 1064 aaPredicted RBP15.9■□□□□ 0.14
USP8-209ENST00000560297 BTAF1O14981 1849 aa15.89■□□□□ 0.13
USP8-209ENST00000560297 HEG1Q9ULI3 1381 aa15.89■□□□□ 0.13
USP8-209ENST00000560297 GIGYF1O75420 1035 aaPredicted RBP15.89■□□□□ 0.13
USP8-209ENST00000560297 STARD3NLO95772 234 aa15.89■□□□□ 0.13
USP8-209ENST00000560297 SLC4A9Q96Q91 983 aa15.89■□□□□ 0.13
USP8-209ENST00000560297 LRRC4BQ9NT99 713 aa15.89■□□□□ 0.13
USP8-209ENST00000560297 TRMT2AQ8IZ69 625 aaKnown RBP15.88■□□□□ 0.13
USP8-209ENST00000560297 TSR2Q969E8 191 aaKnown RBP15.88■□□□□ 0.13
USP8-209ENST00000560297 CDCA7LQ96GN5 454 aa15.88■□□□□ 0.13
USP8-209ENST00000560297 SOS1Q07889 1333 aaPredicted RBP15.88■□□□□ 0.13
USP8-209ENST00000560297 FANCIQ9NVI1 1328 aa15.88■□□□□ 0.13
USP8-209ENST00000560297 HOXB7P09629 217 aa15.87■□□□□ 0.13
USP8-209ENST00000560297 ITPK1Q13572 414 aa15.87■□□□□ 0.13
USP8-209ENST00000560297 SIPA1L3O60292 1781 aaPredicted RBP15.87■□□□□ 0.13
USP8-209ENST00000560297 TNS1Q9HBL0 1735 aaKnown RBP15.86■□□□□ 0.13
USP8-209ENST00000560297 KCNQ4P56696 695 aa15.86■□□□□ 0.13
USP8-209ENST00000560297 RC3H1Q5TC82 1133 aaKnown RBP15.86■□□□□ 0.13
USP8-209ENST00000560297 DUSP27Q5VZP5 1158 aa15.86■□□□□ 0.13
USP8-209ENST00000560297 DNAJC10Q8IXB1 793 aa15.86■□□□□ 0.13
USP8-209ENST00000560297 YTHDC1Q96MU7 727 aaKnown RBP15.86■□□□□ 0.13
USP8-209ENST00000560297 VIRMAQ69YN4 1812 aaKnown RBP15.85■□□□□ 0.13
USP8-209ENST00000560297 KCPQ6ZWJ8 1503 aa15.85■□□□□ 0.13
USP8-209ENST00000560297 CYP19A1P11511 503 aaPredicted RBP15.85■□□□□ 0.13
USP8-209ENST00000560297 NBPF14Q5TI25 921 aa15.85■□□□□ 0.13
USP8-209ENST00000560297 USP16Q9Y5T5 823 aa15.85■□□□□ 0.13
USP8-209ENST00000560297 EXOSC9Q06265 439 aaKnown RBP15.84■□□□□ 0.13
USP8-209ENST00000560297 C8orf58Q8NAV2 365 aa15.84■□□□□ 0.13
USP8-209ENST00000560297 LINC00116Q8NCU8 138 aa15.84■□□□□ 0.13
USP8-209ENST00000560297 PAPPAQ13219 1627 aa15.83■□□□□ 0.13
USP8-209ENST00000560297 ELL2O00472 640 aaPredicted RBP15.83■□□□□ 0.12
USP8-209ENST00000560297 CRKLP46109 303 aaKnown RBP15.83■□□□□ 0.12
USP8-209ENST00000560297 KRT24Q2M2I5 525 aa15.83■□□□□ 0.12
USP8-209ENST00000560297 TWISTNBQ3B726 338 aaPredicted RBP15.83■□□□□ 0.12
USP8-209ENST00000560297 PRAMEF22A3QJZ6 481 aa15.82■□□□□ 0.12
USP8-209ENST00000560297 CT47B1P0C2W7 299 aaPredicted RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms