RNA–Protein interactions for RNA: ENST00000559742.5

PDE8A-211, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-211ENST00000559742 GSPT1P15170 499 aaKnown RBP23.16■■□□□ 1.3
PDE8A-211ENST00000559742 LTN1O94822 1766 aa23.16■■□□□ 1.3
PDE8A-211ENST00000559742 FKBP5Q13451 457 aaPredicted RBP23.15■■□□□ 1.3
PDE8A-211ENST00000559742 PLEKHM2Q8IWE5 1019 aa23.15■■□□□ 1.3
PDE8A-211ENST00000559742 NCOA3Q9Y6Q9 1424 aa23.15■■□□□ 1.3
PDE8A-211ENST00000559742 NBPF6Q5VWK0 638 aa23.15■■□□□ 1.3
PDE8A-211ENST00000559742 LRRC59Q96AG4 307 aaKnown RBP23.15■■□□□ 1.3
PDE8A-211ENST00000559742 NBPF4Q96M43 638 aa23.15■■□□□ 1.3
PDE8A-211ENST00000559742 NWD1Q149M9 1564 aa23.14■■□□□ 1.3
PDE8A-211ENST00000559742 ADAMTSL3P82987 1691 aa23.14■■□□□ 1.3
PDE8A-211ENST00000559742 KIF24Q5T7B8 1368 aa23.14■■□□□ 1.29
PDE8A-211ENST00000559742 DDIT3P35638 169 aa23.13■■□□□ 1.29
PDE8A-211ENST00000559742 MAP3K5Q99683 1374 aa23.13■■□□□ 1.29
PDE8A-211ENST00000559742 HSCBQ8IWL3 235 aa23.13■■□□□ 1.29
PDE8A-211ENST00000559742 RPAP2Q8IXW5 612 aaPredicted RBP23.12■■□□□ 1.29
PDE8A-211ENST00000559742 FLIIQ13045 1269 aa23.12■■□□□ 1.29
PDE8A-211ENST00000559742 OFD1O75665 1012 aa23.11■■□□□ 1.29
PDE8A-211ENST00000559742 CCDC173Q0VFZ6 552 aa23.11■■□□□ 1.29
PDE8A-211ENST00000559742 RBM25P49756 843 aaKnown RBP23.1■■□□□ 1.29
PDE8A-211ENST00000559742 TAF7Q15545 349 aaPredicted RBP23.1■■□□□ 1.29
PDE8A-211ENST00000559742 ZSCAN30Q86W11 494 aa23.1■■□□□ 1.29
PDE8A-211ENST00000559742 PPP1R9BQ96SB3 815 aa23.1■■□□□ 1.29
PDE8A-211ENST00000559742 LGR6Q9HBX8 967 aa23.1■■□□□ 1.29
PDE8A-211ENST00000559742 IP6K1Q92551 441 aa23.09■■□□□ 1.29
PDE8A-211ENST00000559742 TNPO1Q92973 898 aaKnown RBP23.09■■□□□ 1.29
PDE8A-211ENST00000559742 RBM42Q9BTD8 480 aaKnown RBP23.09■■□□□ 1.29
PDE8A-211ENST00000559742 EIF2S2P20042 333 aaKnown RBP23.09■■□□□ 1.29
PDE8A-211ENST00000559742 CCDC30Q5VVM6 783 aa23.09■■□□□ 1.29
PDE8A-211ENST00000559742 TERF1P54274 439 aa23.08■■□□□ 1.29
PDE8A-211ENST00000559742 HTATSF1O43719 755 aaKnown RBP23.08■■□□□ 1.29
PDE8A-211ENST00000559742 EXOC6BQ9Y2D4 811 aa23.08■■□□□ 1.29
PDE8A-211ENST00000559742 RGPD2P0DJD1 1756 aa23.08■■□□□ 1.28
PDE8A-211ENST00000559742 SKOR2Q2VWA4 1001 aaPredicted RBP23.07■■□□□ 1.28
PDE8A-211ENST00000559742 CDC45O75419 566 aa23.07■■□□□ 1.28
PDE8A-211ENST00000559742 CCT4P50991 539 aaKnown RBP23.07■■□□□ 1.28
PDE8A-211ENST00000559742 RBM10P98175 930 aaKnown RBP23.07■■□□□ 1.28
PDE8A-211ENST00000559742 TTC22Q5TAA0 569 aa23.07■■□□□ 1.28
PDE8A-211ENST00000559742 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.07■■□□□ 1.28
PDE8A-211ENST00000559742 PHAXQ9H814 394 aaKnown RBP23.07■■□□□ 1.28
PDE8A-211ENST00000559742 ADGRL3Q9HAR2 1447 aa23.06■■□□□ 1.28
PDE8A-211ENST00000559742 FOXD4L1Q9NU39 408 aa23.06■■□□□ 1.28
PDE8A-211ENST00000559742 CD2BP2O95400 341 aaKnown RBP23.06■■□□□ 1.28
PDE8A-211ENST00000559742 TSHZ3Q63HK5 1081 aa23.06■■□□□ 1.28
PDE8A-211ENST00000559742 GBP4Q96PP9 640 aa23.06■■□□□ 1.28
PDE8A-211ENST00000559742 KIF2CQ99661 725 aa23.06■■□□□ 1.28
PDE8A-211ENST00000559742 HDGFL1Q5TGJ6 251 aa23.05■■□□□ 1.28
PDE8A-211ENST00000559742 MPRIPQ6WCQ1 1025 aa23.05■■□□□ 1.28
PDE8A-211ENST00000559742 KCNQ3O43525 872 aa23.04■■□□□ 1.28
PDE8A-211ENST00000559742 LRRC37A3O60309 1634 aa23.04■■□□□ 1.28
PDE8A-211ENST00000559742 MAP7D2Q96T17 732 aa23.04■■□□□ 1.28
PDE8A-211ENST00000559742 GCP02774 474 aa23.03■■□□□ 1.28
PDE8A-211ENST00000559742 GNAI2P04899 355 aa23.03■■□□□ 1.28
PDE8A-211ENST00000559742 NFAT5O94916 1531 aa23.03■■□□□ 1.28
PDE8A-211ENST00000559742 CIZ1Q9ULV3 898 aaPredicted RBP23.03■■□□□ 1.28
PDE8A-211ENST00000559742 PNMA6EA0A0J9YXQ4 647 aa23.02■■□□□ 1.28
PDE8A-211ENST00000559742 HMMRO75330 724 aa23.02■■□□□ 1.28
PDE8A-211ENST00000559742 ANXA1P04083 346 aa23.02■■□□□ 1.28
PDE8A-211ENST00000559742 MSNP26038 577 aaKnown RBP23.02■■□□□ 1.28
PDE8A-211ENST00000559742 NASPP49321 788 aaPredicted RBP23.02■■□□□ 1.28
PDE8A-211ENST00000559742 NPHP4O75161 1426 aaPredicted RBP23.02■■□□□ 1.28
PDE8A-211ENST00000559742 FAM208AQ9UK61 1670 aaKnown RBP23.02■■□□□ 1.28
PDE8A-211ENST00000559742 SDSP20132 328 aa23.02■■□□□ 1.28
PDE8A-211ENST00000559742 PTMSP20962 102 aa23.02■■□□□ 1.28
PDE8A-211ENST00000559742 RAB3GAP1Q15042 981 aa23.02■■□□□ 1.28
PDE8A-211ENST00000559742 KCNH5Q8NCM2 988 aa23.01■■□□□ 1.27
PDE8A-211ENST00000559742 ZNF142P52746 1687 aaPredicted RBP23.01■■□□□ 1.27
PDE8A-211ENST00000559742 HSP90AB1P08238 724 aaKnown RBP23.01■■□□□ 1.27
PDE8A-211ENST00000559742 ZNF530Q6P9A1 599 aaPredicted RBP23.01■■□□□ 1.27
PDE8A-211ENST00000559742 USP54Q70EL1 1684 aa23.01■■□□□ 1.27
PDE8A-211ENST00000559742 PROSER2Q86WR7 435 aaPredicted RBP23■■□□□ 1.27
PDE8A-211ENST00000559742 SNX21Q969T3 373 aa23■■□□□ 1.27
PDE8A-211ENST00000559742 LRRFIP2Q9Y608 721 aaKnown RBP23■■□□□ 1.27
PDE8A-211ENST00000559742 FAM13BQ9NYF5 915 aa22.99■■□□□ 1.27
PDE8A-211ENST00000559742 DDX17Q92841 729 aaKnown RBP22.98■■□□□ 1.27
PDE8A-211ENST00000559742 AXIN2Q9Y2T1 843 aa22.98■■□□□ 1.27
PDE8A-211ENST00000559742 TEFQ10587 303 aa22.98■■□□□ 1.27
PDE8A-211ENST00000559742 ANP32BQ92688 251 aaKnown RBP22.97■■□□□ 1.27
PDE8A-211ENST00000559742 CHPF2Q9P2E5 772 aa22.97■■□□□ 1.27
PDE8A-211ENST00000559742 ZC3H6P61129 1189 aaKnown RBP22.97■■□□□ 1.27
PDE8A-211ENST00000559742 R3HCC1Q9Y3T6 440 aaKnown RBP22.97■■□□□ 1.27
PDE8A-211ENST00000559742 BTBD11A6QL63 1104 aa22.96■■□□□ 1.27
PDE8A-211ENST00000559742 ANKRD24Q8TF21 1146 aa22.96■■□□□ 1.27
PDE8A-211ENST00000559742 EIF4A1P60842 406 aaKnown RBP22.96■■□□□ 1.27
PDE8A-211ENST00000559742 USP44Q9H0E7 712 aa22.96■■□□□ 1.27
PDE8A-211ENST00000559742 CEMIPQ8WUJ3 1361 aa22.95■■□□□ 1.26
PDE8A-211ENST00000559742 IBTKQ9P2D0 1353 aaPredicted RBP22.95■■□□□ 1.26
PDE8A-211ENST00000559742 GNAI3P08754 354 aa22.95■■□□□ 1.26
PDE8A-211ENST00000559742 KRT28Q7Z3Y7 464 aa22.95■■□□□ 1.26
PDE8A-211ENST00000559742 ARHGEF25Q86VW2 580 aa22.95■■□□□ 1.26
PDE8A-211ENST00000559742 PDE1AP54750 535 aa22.94■■□□□ 1.26
PDE8A-211ENST00000559742 UBTFL1P0CB47 393 aaPredicted RBP22.94■■□□□ 1.26
PDE8A-211ENST00000559742 SMAP1Q8IYB5 467 aaPredicted RBP22.93■■□□□ 1.26
PDE8A-211ENST00000559742 PXDNQ92626 1479 aa22.93■■□□□ 1.26
PDE8A-211ENST00000559742 CACNA1FO60840 1977 aa22.93■■□□□ 1.26
PDE8A-211ENST00000559742 PLEKHO1Q53GL0 409 aaPredicted RBP22.93■■□□□ 1.26
PDE8A-211ENST00000559742 C1orf141Q5JVX7 400 aa22.92■■□□□ 1.26
PDE8A-211ENST00000559742 LRRCC1Q9C099 1032 aa22.92■■□□□ 1.26
PDE8A-211ENST00000559742 IL1RAPL2Q9NP60 686 aa22.92■■□□□ 1.26
PDE8A-211ENST00000559742 PRAMEF22A3QJZ6 481 aa22.92■■□□□ 1.26
PDE8A-211ENST00000559742 PI4KAP2A4QPH2 592 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms