RNA–Protein interactions for RNA: ENST00000559476.2

ZEB1-215, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 1,205 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-215ENST00000559476 NR1H3Q13133 447 aa8.27□□□□□ -1.09
ZEB1-215ENST00000559476 LYSMD3Q7Z3D4 306 aa8.27□□□□□ -1.09
ZEB1-215ENST00000559476 GPR161Q8N6U8 529 aaKnown RBP8.27□□□□□ -1.09
ZEB1-215ENST00000559476 COL25A1Q9BXS0 654 aaPredicted RBP8.27□□□□□ -1.09
ZEB1-215ENST00000559476 ARAP1Q96P48 1450 aa8.26□□□□□ -1.09
ZEB1-215ENST00000559476 GIGYF1O75420 1035 aaPredicted RBP8.26□□□□□ -1.09
ZEB1-215ENST00000559476 FOXD4L5Q5VV16 416 aaPredicted RBP8.26□□□□□ -1.09
ZEB1-215ENST00000559476 KDF1Q8NAX2 398 aaPredicted RBP8.26□□□□□ -1.09
ZEB1-215ENST00000559476 MTMR14Q8NCE2 650 aa8.26□□□□□ -1.09
ZEB1-215ENST00000559476 CNTNAP3BQ96NU0 1288 aa8.26□□□□□ -1.09
ZEB1-215ENST00000559476 CNTNAP3Q9BZ76 1288 aa8.26□□□□□ -1.09
ZEB1-215ENST00000559476 CYLDQ9NQC7 956 aa8.26□□□□□ -1.09
ZEB1-215ENST00000559476 SUPT16HQ9Y5B9 1047 aaKnown RBP8.26□□□□□ -1.09
ZEB1-215ENST00000559476 VPS8Q8N3P4 1428 aa8.26□□□□□ -1.09
ZEB1-215ENST00000559476 SYNJ2O15056 1496 aa8.26□□□□□ -1.09
ZEB1-215ENST00000559476 GRIN2AQ12879 1464 aa8.26□□□□□ -1.09
ZEB1-215ENST00000559476 ATP5J2-PTCD1G3V325 749 aa8.25□□□□□ -1.09
ZEB1-215ENST00000559476 KRT76Q01546 638 aa8.25□□□□□ -1.09
ZEB1-215ENST00000559476 CC2D2BQ6DHV5 1058 aa8.25□□□□□ -1.09
ZEB1-215ENST00000559476 VWA5B2Q8N398 1253 aa8.25□□□□□ -1.09
ZEB1-215ENST00000559476 GMCL1Q96IK5 515 aa8.25□□□□□ -1.09
ZEB1-215ENST00000559476 ARHGAP35Q9NRY4 1499 aa8.25□□□□□ -1.09
ZEB1-215ENST00000559476 CFAP43Q8NDM7 1665 aa8.24□□□□□ -1.09
ZEB1-215ENST00000559476 CDC14CA4D256 554 aa8.24□□□□□ -1.09
ZEB1-215ENST00000559476 ERVK-9P63128 1117 aa8.24□□□□□ -1.09
ZEB1-215ENST00000559476 CEP170Q5SW79 1584 aa8.23□□□□□ -1.09
ZEB1-215ENST00000559476 SENP3-EIF4A1A0A087X0R7 540 aa8.23□□□□□ -1.09
ZEB1-215ENST00000559476 RNF225M0QZC1 329 aaPredicted RBP8.23□□□□□ -1.09
ZEB1-215ENST00000559476 CYP2U1Q7Z449 544 aa8.23□□□□□ -1.09
ZEB1-215ENST00000559476 ESF1Q9H501 851 aaKnown RBP8.23□□□□□ -1.09
ZEB1-215ENST00000559476 KCNMA1Q12791 1236 aa8.22□□□□□ -1.09
ZEB1-215ENST00000559476 SNRKQ9NRH2 765 aa8.22□□□□□ -1.09
ZEB1-215ENST00000559476 PCF11O94913 1555 aaKnown RBP8.22□□□□□ -1.09
ZEB1-215ENST00000559476 SLURP2P0DP57 97 aa8.21□□□□□ -1.1
ZEB1-215ENST00000559476 RANGAP1P46060 587 aaPredicted RBP8.21□□□□□ -1.1
ZEB1-215ENST00000559476 LRRIQ1Q96JM4 1722 aa8.2□□□□□ -1.1
ZEB1-215ENST00000559476 UGGT2Q9NYU1 1516 aa8.2□□□□□ -1.1
ZEB1-215ENST00000559476 RNFT1Q5M7Z0 435 aa8.2□□□□□ -1.1
ZEB1-215ENST00000559476 NLRP3Q96P20 1036 aa8.2□□□□□ -1.1
ZEB1-215ENST00000559476 KIAA0556O60303 1618 aa8.2□□□□□ -1.1
ZEB1-215ENST00000559476 KIAA0586Q9BVV6 1533 aa8.19□□□□□ -1.1
ZEB1-215ENST00000559476 A0A1W2PRU2 124 aa8.19□□□□□ -1.1
ZEB1-215ENST00000559476 MEN1O00255 615 aa8.19□□□□□ -1.1
ZEB1-215ENST00000559476 WDR44Q5JSH3 913 aa8.19□□□□□ -1.1
ZEB1-215ENST00000559476 FOXR1Q6PIV2 292 aa8.19□□□□□ -1.1
ZEB1-215ENST00000559476 PRICKLE2Q7Z3G6 844 aa8.19□□□□□ -1.1
ZEB1-215ENST00000559476 FYCO1Q9BQS8 1478 aa8.19□□□□□ -1.1
ZEB1-215ENST00000559476 EIF4G2P78344 907 aaKnown RBP eCLIP8.18□□□□□ -1.1
ZEB1-215ENST00000559476 CLN3Q13286 438 aa8.18□□□□□ -1.1
ZEB1-215ENST00000559476 ZNF385CQ66K41 422 aaPredicted RBP8.18□□□□□ -1.1
ZEB1-215ENST00000559476 TRIM22Q8IYM9 498 aa8.18□□□□□ -1.1
ZEB1-215ENST00000559476 SVOPQ8N4V2 548 aa8.18□□□□□ -1.1
ZEB1-215ENST00000559476 ADAMTS8Q9UP79 889 aa8.18□□□□□ -1.1
ZEB1-215ENST00000559476 DYRK1BQ9Y463 629 aa8.18□□□□□ -1.1
ZEB1-215ENST00000559476 PCDHB11Q9Y5F2 797 aa8.18□□□□□ -1.1
ZEB1-215ENST00000559476 HECW1Q76N89 1606 aa8.18□□□□□ -1.1
ZEB1-215ENST00000559476 H7C1W4 665 aa8.17□□□□□ -1.1
ZEB1-215ENST00000559476 SRSF11Q05519 484 aaKnown RBP8.17□□□□□ -1.1
ZEB1-215ENST00000559476 SLC27A3Q5K4L6 730 aa8.17□□□□□ -1.1
ZEB1-215ENST00000559476 NUP160Q12769 1436 aa8.17□□□□□ -1.1
ZEB1-215ENST00000559476 FHOD3Q2V2M9 1422 aa8.17□□□□□ -1.1
ZEB1-215ENST00000559476 TIAM1Q13009 1591 aa8.17□□□□□ -1.1
ZEB1-215ENST00000559476 TRAK2O60296 914 aa8.16□□□□□ -1.1
ZEB1-215ENST00000559476 GPR37L1O60883 481 aa8.16□□□□□ -1.1
ZEB1-215ENST00000559476 GNRH1P01148 92 aa8.16□□□□□ -1.1
ZEB1-215ENST00000559476 MAP3K1Q13233 1512 aa8.16□□□□□ -1.1
ZEB1-215ENST00000559476 SHROOM2Q13796 1616 aa8.16□□□□□ -1.1
ZEB1-215ENST00000559476 FMN1Q68DA7 1419 aa8.16□□□□□ -1.1
ZEB1-215ENST00000559476 CHMP7Q8WUX9 453 aaPredicted RBP8.16□□□□□ -1.1
ZEB1-215ENST00000559476 GRIP2Q9C0E4 1043 aa8.16□□□□□ -1.1
ZEB1-215ENST00000559476 SPATA31C2B4DYI2 1134 aa8.15□□□□□ -1.1
ZEB1-215ENST00000559476 ADAMTS2O95450 1211 aa8.15□□□□□ -1.1
ZEB1-215ENST00000559476 MYCP01106 439 aaPredicted RBP8.15□□□□□ -1.1
ZEB1-215ENST00000559476 PRKCSHP14314 528 aaPredicted RBP8.15□□□□□ -1.1
ZEB1-215ENST00000559476 RHOQP17081 205 aa8.15□□□□□ -1.1
ZEB1-215ENST00000559476 ZNF837Q96EG3 531 aaPredicted RBP8.15□□□□□ -1.1
ZEB1-215ENST00000559476 OSBPL3Q9H4L5 887 aa8.15□□□□□ -1.1
ZEB1-215ENST00000559476 TBC1D2BQ9UPU7 963 aa8.15□□□□□ -1.1
ZEB1-215ENST00000559476 WASHC4Q2M389 1173 aa8.14□□□□□ -1.11
ZEB1-215ENST00000559476 RAPGEF6Q8TEU7 1601 aa8.14□□□□□ -1.11
ZEB1-215ENST00000559476 CASKIN1Q8WXD9 1431 aa8.13□□□□□ -1.11
ZEB1-215ENST00000559476 ARHGEF15O94989 841 aa8.13□□□□□ -1.11
ZEB1-215ENST00000559476 SCTRP47872 440 aa8.13□□□□□ -1.11
ZEB1-215ENST00000559476 MAP3K10Q02779 954 aa8.13□□□□□ -1.11
ZEB1-215ENST00000559476 TMEM151AQ8N4L1 468 aa8.13□□□□□ -1.11
ZEB1-215ENST00000559476 MBIPQ9NS73 344 aa8.13□□□□□ -1.11
ZEB1-215ENST00000559476 CUEDC1Q9NWM3 386 aaPredicted RBP8.13□□□□□ -1.11
ZEB1-215ENST00000559476 CEP126Q9P2H0 1117 aa8.13□□□□□ -1.11
ZEB1-215ENST00000559476 CDK11AQ9UQ88 783 aaPredicted RBP8.13□□□□□ -1.11
ZEB1-215ENST00000559476 DISP1Q96F81 1524 aa8.13□□□□□ -1.11
ZEB1-215ENST00000559476 POU4F2Q12837 409 aa8.12□□□□□ -1.11
ZEB1-215ENST00000559476 ERICH6BQ5W0A0 696 aa8.12□□□□□ -1.11
ZEB1-215ENST00000559476 NBPF10Q6P3W6 841 aaKnown RBP8.12□□□□□ -1.11
ZEB1-215ENST00000559476 RIPOR1Q6ZS17 1223 aa8.12□□□□□ -1.11
ZEB1-215ENST00000559476 TAS1R3Q7RTX0 852 aa8.12□□□□□ -1.11
ZEB1-215ENST00000559476 NBPF15Q8N660 670 aa8.12□□□□□ -1.11
ZEB1-215ENST00000559476 SCARF2Q96GP6 870 aaPredicted RBP8.12□□□□□ -1.11
ZEB1-215ENST00000559476 TRERF1Q96PN7 1200 aa8.12□□□□□ -1.11
ZEB1-215ENST00000559476 ESYT1Q9BSJ8 1104 aa8.12□□□□□ -1.11
ZEB1-215ENST00000559476 ARHGEF10LQ9HCE6 1279 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms