RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 ATG3Q9NT62 314 aa21.05■□□□□ 0.96
RABGGTA-206ENST00000558649 MAPK8IP3Q9UPT6 1336 aa21.04■□□□□ 0.96
RABGGTA-206ENST00000558649 TUBGCP6Q96RT7 1819 aa21.04■□□□□ 0.96
RABGGTA-206ENST00000558649 SLC52A2Q9HAB3 445 aa21.04■□□□□ 0.96
RABGGTA-206ENST00000558649 SLC15A2Q16348 729 aa21.03■□□□□ 0.96
RABGGTA-206ENST00000558649 ZNF827Q17R98 1081 aa21.03■□□□□ 0.96
RABGGTA-206ENST00000558649 PLEKHF1Q96S99 279 aa21.03■□□□□ 0.96
RABGGTA-206ENST00000558649 RBM42Q9BTD8 480 aaKnown RBP21.03■□□□□ 0.96
RABGGTA-206ENST00000558649 PNNQ9H307 717 aaKnown RBP21.03■□□□□ 0.96
RABGGTA-206ENST00000558649 SIPA1L3O60292 1781 aaPredicted RBP21.02■□□□□ 0.96
RABGGTA-206ENST00000558649 CASZ1Q86V15 1759 aa21.01■□□□□ 0.95
RABGGTA-206ENST00000558649 LOC102724428A0A0B4J2F2 783 aa21.01■□□□□ 0.95
RABGGTA-206ENST00000558649 SIK1P57059 783 aa21.01■□□□□ 0.95
RABGGTA-206ENST00000558649 TEFQ10587 303 aa21.01■□□□□ 0.95
RABGGTA-206ENST00000558649 CCDC146Q8IYE0 955 aa21.01■□□□□ 0.95
RABGGTA-206ENST00000558649 IL17REQ8NFR9 667 aa21.01■□□□□ 0.95
RABGGTA-206ENST00000558649 RTF1Q92541 710 aaKnown RBP21.01■□□□□ 0.95
RABGGTA-206ENST00000558649 C4BP0C0L5 1744 aa21.01■□□□□ 0.95
RABGGTA-206ENST00000558649 PTCD1O75127 700 aaKnown RBP21■□□□□ 0.95
RABGGTA-206ENST00000558649 CCDC184Q52MB2 194 aa21■□□□□ 0.95
RABGGTA-206ENST00000558649 MCM10Q7L590 875 aa21■□□□□ 0.95
RABGGTA-206ENST00000558649 ATP6V1AP38606 617 aa20.99■□□□□ 0.95
RABGGTA-206ENST00000558649 QSER1Q2KHR3 1735 aa20.98■□□□□ 0.95
RABGGTA-206ENST00000558649 SLC39A6Q13433 755 aa20.98■□□□□ 0.95
RABGGTA-206ENST00000558649 DCTN1Q14203 1278 aa20.98■□□□□ 0.95
RABGGTA-206ENST00000558649 AKT1S1Q96B36 256 aa20.98■□□□□ 0.95
RABGGTA-206ENST00000558649 PDGFDQ9GZP0 370 aaPredicted RBP20.98■□□□□ 0.95
RABGGTA-206ENST00000558649 TFCP2L1Q9NZI6 479 aa20.98■□□□□ 0.95
RABGGTA-206ENST00000558649 ADAMTS8Q9UP79 889 aa20.98■□□□□ 0.95
RABGGTA-206ENST00000558649 NFE2L2Q16236 605 aa20.97■□□□□ 0.95
RABGGTA-206ENST00000558649 TJP1Q07157 1748 aa20.97■□□□□ 0.95
RABGGTA-206ENST00000558649 CEMIPQ8WUJ3 1361 aa20.97■□□□□ 0.95
RABGGTA-206ENST00000558649 ZNF831Q5JPB2 1677 aa20.96■□□□□ 0.95
RABGGTA-206ENST00000558649 COL5A3P25940 1745 aaPredicted RBP20.96■□□□□ 0.95
RABGGTA-206ENST00000558649 UBR2Q8IWV8 1755 aa20.96■□□□□ 0.95
RABGGTA-206ENST00000558649 ITPK1Q13572 414 aa20.96■□□□□ 0.95
RABGGTA-206ENST00000558649 LINC00116Q8NCU8 138 aa20.96■□□□□ 0.95
RABGGTA-206ENST00000558649 MRS2Q9HD23 443 aa20.96■□□□□ 0.95
RABGGTA-206ENST00000558649 SLC4A9Q96Q91 983 aa20.95■□□□□ 0.94
RABGGTA-206ENST00000558649 KCPQ6ZWJ8 1503 aa20.94■□□□□ 0.94
RABGGTA-206ENST00000558649 LRP5O75197 1615 aa20.94■□□□□ 0.94
RABGGTA-206ENST00000558649 TTC5Q8N0Z6 440 aa20.94■□□□□ 0.94
RABGGTA-206ENST00000558649 AK7Q96M32 723 aa20.94■□□□□ 0.94
RABGGTA-206ENST00000558649 RRP7AQ9Y3A4 280 aaKnown RBP20.94■□□□□ 0.94
RABGGTA-206ENST00000558649 UBR3Q6ZT12 1888 aa20.93■□□□□ 0.94
RABGGTA-206ENST00000558649 NEUROD2Q15784 382 aa20.93■□□□□ 0.94
RABGGTA-206ENST00000558649 RUNDC1Q96C34 613 aa20.93■□□□□ 0.94
RABGGTA-206ENST00000558649 MSH5O43196 834 aa20.92■□□□□ 0.94
RABGGTA-206ENST00000558649 HTATSF1O43719 755 aaKnown RBP20.92■□□□□ 0.94
RABGGTA-206ENST00000558649 ZBTB7AO95365 584 aa20.92■□□□□ 0.94
RABGGTA-206ENST00000558649 RIPK4P57078 832 aa20.92■□□□□ 0.94
RABGGTA-206ENST00000558649 PNPLA7Q6ZV29 1317 aa20.92■□□□□ 0.94
RABGGTA-206ENST00000558649 BTBD11A6QL63 1104 aa20.91■□□□□ 0.94
RABGGTA-206ENST00000558649 PHF14O94880 888 aa20.91■□□□□ 0.94
RABGGTA-206ENST00000558649 CICQ96RK0 1608 aaPredicted RBP20.91■□□□□ 0.94
RABGGTA-206ENST00000558649 THUMPD2Q9BTF0 503 aaKnown RBP20.91■□□□□ 0.94
RABGGTA-206ENST00000558649 HMGB2P26583 209 aaKnown RBP20.9■□□□□ 0.94
RABGGTA-206ENST00000558649 TMPOP42166 694 aaKnown RBP20.9■□□□□ 0.94
RABGGTA-206ENST00000558649 GNPATO15228 680 aa20.89■□□□□ 0.93
RABGGTA-206ENST00000558649 ZNF790Q6PG37 636 aa20.89■□□□□ 0.93
RABGGTA-206ENST00000558649 SMIM5Q71RC9 77 aa20.89■□□□□ 0.93
RABGGTA-206ENST00000558649 ATF5Q9Y2D1 282 aaPredicted RBP20.88■□□□□ 0.93
RABGGTA-206ENST00000558649 KCNQ3O43525 872 aa20.87■□□□□ 0.93
RABGGTA-206ENST00000558649 AMIGO3Q86WK7 504 aa20.87■□□□□ 0.93
RABGGTA-206ENST00000558649 DNAJC10Q8IXB1 793 aa20.87■□□□□ 0.93
RABGGTA-206ENST00000558649 SPON1Q9HCB6 807 aa20.87■□□□□ 0.93
RABGGTA-206ENST00000558649 KDM3BQ7LBC6 1761 aa20.87■□□□□ 0.93
RABGGTA-206ENST00000558649 LMOD3Q0VAK6 560 aa20.86■□□□□ 0.93
RABGGTA-206ENST00000558649 COL23A1Q86Y22 540 aaPredicted RBP20.86■□□□□ 0.93
RABGGTA-206ENST00000558649 ZNF496Q96IT1 587 aaPredicted RBP20.86■□□□□ 0.93
RABGGTA-206ENST00000558649 MIS18AQ9NYP9 233 aa20.86■□□□□ 0.93
RABGGTA-206ENST00000558649 MYH14Q7Z406 1995 aaKnown RBP20.85■□□□□ 0.93
RABGGTA-206ENST00000558649 SENP3-EIF4A1A0A087X0R7 540 aa20.85■□□□□ 0.93
RABGGTA-206ENST00000558649 CRKLP46109 303 aaKnown RBP20.85■□□□□ 0.93
RABGGTA-206ENST00000558649 TAF7Q15545 349 aaPredicted RBP20.85■□□□□ 0.93
RABGGTA-206ENST00000558649 PNISRQ8TF01 805 aaKnown RBP20.85■□□□□ 0.93
RABGGTA-206ENST00000558649 CNTNAP4Q9C0A0 1308 aa20.84■□□□□ 0.93
RABGGTA-206ENST00000558649 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.84■□□□□ 0.93
RABGGTA-206ENST00000558649 APAF1O14727 1248 aa20.84■□□□□ 0.93
RABGGTA-206ENST00000558649 FMNL2Q96PY5 1086 aa20.84■□□□□ 0.93
RABGGTA-206ENST00000558649 MTFR1LQ9H019 292 aa20.84■□□□□ 0.93
RABGGTA-206ENST00000558649 HEG1Q9ULI3 1381 aa20.84■□□□□ 0.93
RABGGTA-206ENST00000558649 C4AP0C0L4 1744 aa20.82■□□□□ 0.92
RABGGTA-206ENST00000558649 SSFA2P28290 1259 aa20.82■□□□□ 0.92
RABGGTA-206ENST00000558649 MSL1Q68DK7 614 aa20.82■□□□□ 0.92
RABGGTA-206ENST00000558649 VSIG10Q8N0Z9 540 aa20.82■□□□□ 0.92
RABGGTA-206ENST00000558649 FLAD1Q8NFF5 587 aa20.82■□□□□ 0.92
RABGGTA-206ENST00000558649 PPP1R1BQ9UD71 204 aaPredicted RBP20.82■□□□□ 0.92
RABGGTA-206ENST00000558649 RTCBQ9Y3I0 505 aaKnown RBP20.82■□□□□ 0.92
RABGGTA-206ENST00000558649 RC3H1Q5TC82 1133 aaKnown RBP20.81■□□□□ 0.92
RABGGTA-206ENST00000558649 FAM9BQ8IZU0 186 aa20.81■□□□□ 0.92
RABGGTA-206ENST00000558649 TRIM35Q9UPQ4 493 aa20.81■□□□□ 0.92
RABGGTA-206ENST00000558649 CYP19A1P11511 503 aaPredicted RBP20.8■□□□□ 0.92
RABGGTA-206ENST00000558649 CCDC87Q9NVE4 849 aa20.8■□□□□ 0.92
RABGGTA-206ENST00000558649 SLC16A10Q8TF71 515 aa20.79■□□□□ 0.92
RABGGTA-206ENST00000558649 LAS1LQ9Y4W2 734 aaKnown RBP20.79■□□□□ 0.92
RABGGTA-206ENST00000558649 LAMB4A4D0S4 1761 aa20.78■□□□□ 0.92
RABGGTA-206ENST00000558649 RPS6KA4O75676 772 aa20.78■□□□□ 0.92
RABGGTA-206ENST00000558649 PTGER2P43116 358 aa20.78■□□□□ 0.92
RABGGTA-206ENST00000558649 TRAPPC3LQ5T215 181 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms