RNA–Protein interactions for RNA: ENST00000557963.1

ALDH1A3-203, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

BASIC

Gene ALDH1A3, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-203ENST00000557963 CT47B1P0C2W7 299 aaPredicted RBP29.54■■■□□ 2.32
ALDH1A3-203ENST00000557963 CABP4P57796 275 aa29.53■■■□□ 2.32
ALDH1A3-203ENST00000557963 ONECUT3O60422 494 aaPredicted RBP29.53■■■□□ 2.32
ALDH1A3-203ENST00000557963 NFATC2IPQ8NCF5 419 aa29.53■■■□□ 2.32
ALDH1A3-203ENST00000557963 SIPA1L3O60292 1781 aaPredicted RBP29.51■■■□□ 2.32
ALDH1A3-203ENST00000557963 MARCH10Q8NA82 808 aaPredicted RBP29.5■■■□□ 2.31
ALDH1A3-203ENST00000557963 SUPT16HQ9Y5B9 1047 aaKnown RBP29.5■■■□□ 2.31
ALDH1A3-203ENST00000557963 C8orf58Q8NAV2 365 aa29.47■■■□□ 2.31
ALDH1A3-203ENST00000557963 KDM3BQ7LBC6 1761 aa29.47■■■□□ 2.31
ALDH1A3-203ENST00000557963 TWISTNBQ3B726 338 aaPredicted RBP29.47■■■□□ 2.31
ALDH1A3-203ENST00000557963 TSPYL6Q8N831 410 aa29.47■■■□□ 2.31
ALDH1A3-203ENST00000557963 TOGARAM1Q9Y4F4 1720 aa29.46■■■□□ 2.31
ALDH1A3-203ENST00000557963 RBM6P78332 1123 aaKnown RBP29.46■■■□□ 2.31
ALDH1A3-203ENST00000557963 SEPT12Q8IYM1 358 aa29.46■■■□□ 2.31
ALDH1A3-203ENST00000557963 ELL2O00472 640 aaPredicted RBP29.45■■■□□ 2.31
ALDH1A3-203ENST00000557963 KRT24Q2M2I5 525 aa29.44■■■□□ 2.3
ALDH1A3-203ENST00000557963 TMOD3Q9NYL9 352 aa29.44■■■□□ 2.3
ALDH1A3-203ENST00000557963 VAMP4O75379 141 aa29.44■■■□□ 2.3
ALDH1A3-203ENST00000557963 EIF4A1P60842 406 aaKnown RBP29.44■■■□□ 2.3
ALDH1A3-203ENST00000557963 ZNF428Q96B54 188 aa29.44■■■□□ 2.3
ALDH1A3-203ENST00000557963 KCNQ3O43525 872 aa29.43■■■□□ 2.3
ALDH1A3-203ENST00000557963 RARSP54136 660 aaKnown RBP29.43■■■□□ 2.3
ALDH1A3-203ENST00000557963 ZNF790Q6PG37 636 aa29.43■■■□□ 2.3
ALDH1A3-203ENST00000557963 SLC39A6Q13433 755 aa29.41■■■□□ 2.3
ALDH1A3-203ENST00000557963 TTC5Q8N0Z6 440 aa29.41■■■□□ 2.3
ALDH1A3-203ENST00000557963 SOS1Q07889 1333 aaPredicted RBP29.4■■■□□ 2.3
ALDH1A3-203ENST00000557963 DOT1LQ8TEK3 1739 aa29.39■■■□□ 2.3
ALDH1A3-203ENST00000557963 RGS17Q9UGC6 210 aaPredicted RBP29.39■■■□□ 2.3
ALDH1A3-203ENST00000557963 PIGBQ92521 554 aa29.38■■■□□ 2.29
ALDH1A3-203ENST00000557963 SYTL4Q96C24 671 aaPredicted RBP29.38■■■□□ 2.29
ALDH1A3-203ENST00000557963 RNF123Q5XPI4 1314 aa29.38■■■□□ 2.29
ALDH1A3-203ENST00000557963 BCL9O00512 1426 aa29.37■■■□□ 2.29
ALDH1A3-203ENST00000557963 BCAR3O75815 825 aa29.37■■■□□ 2.29
ALDH1A3-203ENST00000557963 RXRBP28702 533 aa29.37■■■□□ 2.29
ALDH1A3-203ENST00000557963 PRIM1P49642 420 aaKnown RBP29.37■■■□□ 2.29
ALDH1A3-203ENST00000557963 ALDH1L2Q3SY69 923 aa29.37■■■□□ 2.29
ALDH1A3-203ENST00000557963 HOXB7P09629 217 aa29.35■■■□□ 2.29
ALDH1A3-203ENST00000557963 RRP1P56182 461 aaKnown RBP29.35■■■□□ 2.29
ALDH1A3-203ENST00000557963 ILDR1Q86SU0 546 aaPredicted RBP29.35■■■□□ 2.29
ALDH1A3-203ENST00000557963 SSH1Q8WYL5 1049 aa29.35■■■□□ 2.29
ALDH1A3-203ENST00000557963 ACSBG1Q96GR2 724 aa29.35■■■□□ 2.29
ALDH1A3-203ENST00000557963 BCL2L13Q9BXK5 485 aa29.35■■■□□ 2.29
ALDH1A3-203ENST00000557963 SMC4Q9NTJ3 1288 aa29.35■■■□□ 2.29
ALDH1A3-203ENST00000557963 ITGB4P16144 1822 aa29.35■■■□□ 2.29
ALDH1A3-203ENST00000557963 HEG1Q9ULI3 1381 aa29.35■■■□□ 2.29
ALDH1A3-203ENST00000557963 PAPPAQ13219 1627 aa29.34■■■□□ 2.29
ALDH1A3-203ENST00000557963 FMNL2Q96PY5 1086 aa29.34■■■□□ 2.29
ALDH1A3-203ENST00000557963 ZNF496Q96IT1 587 aaPredicted RBP29.33■■■□□ 2.29
ALDH1A3-203ENST00000557963 GIGYF1O75420 1035 aaPredicted RBP29.32■■■□□ 2.28
ALDH1A3-203ENST00000557963 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.32■■■□□ 2.28
ALDH1A3-203ENST00000557963 POTEAQ6S8J7 498 aa29.31■■■□□ 2.28
ALDH1A3-203ENST00000557963 CHMP4AQ9BY43 222 aa29.31■■■□□ 2.28
ALDH1A3-203ENST00000557963 NEFLP07196 543 aa29.3■■■□□ 2.28
ALDH1A3-203ENST00000557963 FAM182BQ5T319 152 aa29.3■■■□□ 2.28
ALDH1A3-203ENST00000557963 KRT27Q7Z3Y8 459 aa29.3■■■□□ 2.28
ALDH1A3-203ENST00000557963 ASAP1Q9ULH1 1129 aa29.3■■■□□ 2.28
ALDH1A3-203ENST00000557963 ATG3Q9NT62 314 aa29.29■■■□□ 2.28
ALDH1A3-203ENST00000557963 HDGFL1Q5TGJ6 251 aa29.28■■■□□ 2.28
ALDH1A3-203ENST00000557963 CCDC30Q5VVM6 783 aa29.28■■■□□ 2.28
ALDH1A3-203ENST00000557963 KCPQ6ZWJ8 1503 aa29.28■■■□□ 2.28
ALDH1A3-203ENST00000557963 UBR2Q8IWV8 1755 aa29.28■■■□□ 2.28
ALDH1A3-203ENST00000557963 TCERG1O14776 1098 aaKnown RBP29.28■■■□□ 2.28
ALDH1A3-203ENST00000557963 BRPF1P55201 1214 aaPredicted RBP29.28■■■□□ 2.28
ALDH1A3-203ENST00000557963 KAT6BQ8WYB5 2073 aa29.27■■■□□ 2.28
ALDH1A3-203ENST00000557963 PLIN1O60240 522 aa29.27■■■□□ 2.28
ALDH1A3-203ENST00000557963 SNRPA1P09661 255 aaKnown RBP29.27■■■□□ 2.28
ALDH1A3-203ENST00000557963 GTF3C3Q9Y5Q9 886 aa29.27■■■□□ 2.28
ALDH1A3-203ENST00000557963 KIF16BQ96L93 1317 aa29.26■■■□□ 2.27
ALDH1A3-203ENST00000557963 KCNQ2O43526 872 aa29.26■■■□□ 2.27
ALDH1A3-203ENST00000557963 PTCD1O75127 700 aaKnown RBP29.26■■■□□ 2.27
ALDH1A3-203ENST00000557963 CANXP27824 592 aaKnown RBP29.26■■■□□ 2.27
ALDH1A3-203ENST00000557963 MRPL50Q8N5N7 158 aaKnown RBP29.26■■■□□ 2.27
ALDH1A3-203ENST00000557963 FRAT1Q92837 279 aaPredicted RBP29.26■■■□□ 2.27
ALDH1A3-203ENST00000557963 BRWD3Q6RI45 1802 aa29.25■■■□□ 2.27
ALDH1A3-203ENST00000557963 STK31Q9BXU1 1019 aa29.25■■■□□ 2.27
ALDH1A3-203ENST00000557963 EIF2S2P20042 333 aaKnown RBP29.25■■■□□ 2.27
ALDH1A3-203ENST00000557963 NECTIN2Q92692 538 aa29.25■■■□□ 2.27
ALDH1A3-203ENST00000557963 RGS12O14924 1447 aa29.24■■■□□ 2.27
ALDH1A3-203ENST00000557963 PRAMEF22A3QJZ6 481 aa29.24■■■□□ 2.27
ALDH1A3-203ENST00000557963 FAM196AQ6ZSG2 479 aa29.22■■■□□ 2.27
ALDH1A3-203ENST00000557963 NHSQ6T4R5 1651 aa29.22■■■□□ 2.27
ALDH1A3-203ENST00000557963 SLC4A2P04920 1241 aa29.21■■■□□ 2.27
ALDH1A3-203ENST00000557963 NOB1Q9ULX3 412 aaKnown RBP29.21■■■□□ 2.27
ALDH1A3-203ENST00000557963 C5P01031 1676 aa29.2■■■□□ 2.27
ALDH1A3-203ENST00000557963 IPO8O15397 1037 aaKnown RBP29.2■■■□□ 2.26
ALDH1A3-203ENST00000557963 IRX6P78412 446 aaPredicted RBP29.2■■■□□ 2.26
ALDH1A3-203ENST00000557963 ZKSCAN2Q63HK3 967 aa29.2■■■□□ 2.26
ALDH1A3-203ENST00000557963 VSIG10Q8N0Z9 540 aa29.2■■■□□ 2.26
ALDH1A3-203ENST00000557963 SMARCC1Q92922 1105 aaPredicted RBP29.2■■■□□ 2.26
ALDH1A3-203ENST00000557963 RBM42Q9BTD8 480 aaKnown RBP29.2■■■□□ 2.26
ALDH1A3-203ENST00000557963 USP16Q9Y5T5 823 aa29.18■■■□□ 2.26
ALDH1A3-203ENST00000557963 PALLDQ8WX93 1383 aa29.17■■■□□ 2.26
ALDH1A3-203ENST00000557963 CHPF2Q9P2E5 772 aa29.17■■■□□ 2.26
ALDH1A3-203ENST00000557963 DBF4Q9UBU7 674 aaPredicted RBP29.17■■■□□ 2.26
ALDH1A3-203ENST00000557963 FKBP8Q14318 412 aa29.16■■■□□ 2.26
ALDH1A3-203ENST00000557963 ATF7IPQ6VMQ6 1270 aa29.16■■■□□ 2.26
ALDH1A3-203ENST00000557963 ARHGAP45Q92619 1136 aa29.16■■■□□ 2.26
ALDH1A3-203ENST00000557963 PTF1AQ7RTS3 328 aa29.15■■■□□ 2.26
ALDH1A3-203ENST00000557963 TEX13AQ9BXU3 409 aaPredicted RBP29.15■■■□□ 2.26
ALDH1A3-203ENST00000557963 LAMB4A4D0S4 1761 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms