RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 OCSTAMPQ9BR26 566 aa8.8□□□□□ -1
HNRNPC-233ENST00000557768 SUPT6HQ7KZ85 1726 aaKnown RBP8.8□□□□□ -1
HNRNPC-233ENST00000557768 ABCC1P33527 1531 aa8.8□□□□□ -1
HNRNPC-233ENST00000557768 GRM5P41594 1212 aa8.79□□□□□ -1
HNRNPC-233ENST00000557768 TRMT44Q8IYL2 757 aaKnown RBP8.79□□□□□ -1
HNRNPC-233ENST00000557768 ADAM32Q8TC27 787 aa8.79□□□□□ -1
HNRNPC-233ENST00000557768 SLC10A4Q96EP9 437 aa8.79□□□□□ -1
HNRNPC-233ENST00000557768 UHRF1BP1Q6BDS2 1440 aa8.79□□□□□ -1
HNRNPC-233ENST00000557768 MLH3Q9UHC1 1453 aa8.78□□□□□ -1
HNRNPC-233ENST00000557768 POTECB2RU33 542 aa8.78□□□□□ -1
HNRNPC-233ENST00000557768 APBB1O00213 710 aa8.78□□□□□ -1
HNRNPC-233ENST00000557768 SOCS7O14512 581 aa8.78□□□□□ -1
HNRNPC-233ENST00000557768 CAPN5O15484 640 aaPredicted RBP8.78□□□□□ -1
HNRNPC-233ENST00000557768 FSHRP23945 695 aa8.78□□□□□ -1
HNRNPC-233ENST00000557768 C1orf115Q9H7X2 142 aa8.78□□□□□ -1
HNRNPC-233ENST00000557768 GPSM3Q9Y4H4 160 aa8.78□□□□□ -1
HNRNPC-233ENST00000557768 TRAPPC8Q9Y2L5 1435 aa8.78□□□□□ -1
HNRNPC-233ENST00000557768 NR3C2P08235 984 aa8.77□□□□□ -1.01
HNRNPC-233ENST00000557768 WDR4P57081 412 aaKnown RBP8.77□□□□□ -1.01
HNRNPC-233ENST00000557768 NR5A1Q13285 461 aa8.77□□□□□ -1.01
HNRNPC-233ENST00000557768 MROH2AA6NES4 1674 aa8.77□□□□□ -1.01
HNRNPC-233ENST00000557768 AGLP35573 1532 aa8.76□□□□□ -1.01
HNRNPC-233ENST00000557768 CLTCQ00610 1675 aaKnown RBP8.76□□□□□ -1.01
HNRNPC-233ENST00000557768 TBC1D2BQ9UPU7 963 aa8.76□□□□□ -1.01
HNRNPC-233ENST00000557768 MAP4K5Q9Y4K4 846 aa8.76□□□□□ -1.01
HNRNPC-233ENST00000557768 NDUFB9Q9Y6M9 179 aa8.76□□□□□ -1.01
HNRNPC-233ENST00000557768 SAMD9LQ8IVG5 1584 aa8.76□□□□□ -1.01
HNRNPC-233ENST00000557768 CCDC18Q5T9S5 1454 aa8.76□□□□□ -1.01
HNRNPC-233ENST00000557768 CASKIN1Q8WXD9 1431 aa8.75□□□□□ -1.01
HNRNPC-233ENST00000557768 TRIM26Q12899 539 aaPredicted RBP8.75□□□□□ -1.01
HNRNPC-233ENST00000557768 DZIP3Q86Y13 1208 aaKnown RBP8.75□□□□□ -1.01
HNRNPC-233ENST00000557768 ATP13A2Q9NQ11 1180 aa8.75□□□□□ -1.01
HNRNPC-233ENST00000557768 GMPR2Q9P2T1 348 aaKnown RBP8.75□□□□□ -1.01
HNRNPC-233ENST00000557768 ZBBXA8MT70 800 aa8.74□□□□□ -1.01
HNRNPC-233ENST00000557768 ZIC2O95409 532 aaPredicted RBP8.74□□□□□ -1.01
HNRNPC-233ENST00000557768 FBXO45P0C2W1 286 aa8.74□□□□□ -1.01
HNRNPC-233ENST00000557768 BMP1P13497 986 aa8.74□□□□□ -1.01
HNRNPC-233ENST00000557768 TIMP2P16035 220 aa8.74□□□□□ -1.01
HNRNPC-233ENST00000557768 KCTD15Q96SI1 283 aaPredicted RBP8.74□□□□□ -1.01
HNRNPC-233ENST00000557768 ESF1Q9H501 851 aaKnown RBP8.74□□□□□ -1.01
HNRNPC-233ENST00000557768 CDV3Q9UKY7 258 aaKnown RBP8.74□□□□□ -1.01
HNRNPC-233ENST00000557768 SYCP2Q9BX26 1530 aa8.74□□□□□ -1.01
HNRNPC-233ENST00000557768 DISP3Q9P2K9 1392 aa8.73□□□□□ -1.01
HNRNPC-233ENST00000557768 LTBP4Q8N2S1 1624 aa8.73□□□□□ -1.01
HNRNPC-233ENST00000557768 PTPRTO14522 1441 aa8.73□□□□□ -1.01
HNRNPC-233ENST00000557768 RAB15P59190 212 aa8.73□□□□□ -1.01
HNRNPC-233ENST00000557768 ITPKCQ96DU7 683 aa8.73□□□□□ -1.01
HNRNPC-233ENST00000557768 ZFAND3Q9H8U3 227 aa8.73□□□□□ -1.01
HNRNPC-233ENST00000557768 ZNF777Q9ULD5 760 aaPredicted RBP8.73□□□□□ -1.01
HNRNPC-233ENST00000557768 PCDHB9Q9Y5E1 797 aa8.73□□□□□ -1.01
HNRNPC-233ENST00000557768 CAMSAP1Q5T5Y3 1602 aa8.72□□□□□ -1.01
HNRNPC-233ENST00000557768 FYCO1Q9BQS8 1478 aa8.72□□□□□ -1.01
HNRNPC-233ENST00000557768 C11orf95C9JLR9 678 aaPredicted RBP8.72□□□□□ -1.01
HNRNPC-233ENST00000557768 ILDR2Q71H61 639 aa8.72□□□□□ -1.01
HNRNPC-233ENST00000557768 CCDC116Q8IYX3 515 aa8.72□□□□□ -1.01
HNRNPC-233ENST00000557768 KLF16Q9BXK1 252 aaPredicted RBP8.72□□□□□ -1.01
HNRNPC-233ENST00000557768 GDPD2Q9HCC8 539 aa8.72□□□□□ -1.01
HNRNPC-233ENST00000557768 SPATA31D1Q6ZQQ2 1576 aa8.72□□□□□ -1.01
HNRNPC-233ENST00000557768 INO80Q9ULG1 1556 aaPredicted RBP8.72□□□□□ -1.01
HNRNPC-233ENST00000557768 MYO3AQ8NEV4 1616 aa8.72□□□□□ -1.01
HNRNPC-233ENST00000557768 ZNF142P52746 1687 aaPredicted RBP8.72□□□□□ -1.01
HNRNPC-233ENST00000557768 ATP7AQ04656 1500 aa8.71□□□□□ -1.01
HNRNPC-233ENST00000557768 POM121Q96HA1 1249 aa8.71□□□□□ -1.02
HNRNPC-233ENST00000557768 PRM3Q9NNZ6 103 aa8.71□□□□□ -1.02
HNRNPC-233ENST00000557768 ADGBQ8N7X0 1667 aa8.71□□□□□ -1.02
HNRNPC-233ENST00000557768 NCOA1Q15788 1441 aa8.71□□□□□ -1.02
HNRNPC-233ENST00000557768 CNTLNQ9NXG0 1405 aa8.71□□□□□ -1.02
HNRNPC-233ENST00000557768 GPATCH8Q9UKJ3 1502 aaKnown RBP8.7□□□□□ -1.02
HNRNPC-233ENST00000557768 HNRNPMP52272 730 aaKnown RBP eCLIP8.7□□□□□ -1.022e-7■■■□□ 16.8
HNRNPC-233ENST00000557768 IRF5Q13568 498 aa8.7□□□□□ -1.02
HNRNPC-233ENST00000557768 NBPF20Q3BBV1 942 aa8.7□□□□□ -1.02
HNRNPC-233ENST00000557768 TRIM46Q7Z4K8 759 aa8.7□□□□□ -1.02
HNRNPC-233ENST00000557768 PLXNC1O60486 1568 aa8.69□□□□□ -1.02
HNRNPC-233ENST00000557768 NR1H3Q13133 447 aa8.69□□□□□ -1.02
HNRNPC-233ENST00000557768 INTS6LQ5JSJ4 861 aaKnown RBP8.69□□□□□ -1.02
HNRNPC-233ENST00000557768 PPP1R26Q5T8A7 1209 aaPredicted RBP8.69□□□□□ -1.02
HNRNPC-233ENST00000557768 CLUAP1Q96AJ1 413 aa8.69□□□□□ -1.02
HNRNPC-233ENST00000557768 COG6Q9Y2V7 657 aa8.69□□□□□ -1.02
HNRNPC-233ENST00000557768 EMILIN1Q9Y6C2 1016 aa8.69□□□□□ -1.02
HNRNPC-233ENST00000557768 SPAG9O60271 1321 aaKnown RBP8.69□□□□□ -1.02
HNRNPC-233ENST00000557768 A6NJR5 290 aa8.68□□□□□ -1.02
HNRNPC-233ENST00000557768 ABL2P42684 1182 aa8.68□□□□□ -1.02
HNRNPC-233ENST00000557768 SENP2Q9HC62 589 aa8.68□□□□□ -1.02
HNRNPC-233ENST00000557768 ZMYM3Q14202 1370 aa8.68□□□□□ -1.02
HNRNPC-233ENST00000557768 NPATQ14207 1427 aa8.68□□□□□ -1.02
HNRNPC-233ENST00000557768 CEP170BQ9Y4F5 1589 aaPredicted RBP8.68□□□□□ -1.02
HNRNPC-233ENST00000557768 POLR1AO95602 1720 aaPredicted RBP8.68□□□□□ -1.02
HNRNPC-233ENST00000557768 A2MP01023 1474 aa8.67□□□□□ -1.02
HNRNPC-233ENST00000557768 SNRPBP14678 240 aaKnown RBP8.67□□□□□ -1.02
HNRNPC-233ENST00000557768 IQSEC2Q5JU85 1478 aa8.67□□□□□ -1.02
HNRNPC-233ENST00000557768 MRPL14Q6P1L8 145 aaKnown RBP8.67□□□□□ -1.02
HNRNPC-233ENST00000557768 PGPEP1Q9NXJ5 209 aa8.67□□□□□ -1.02
HNRNPC-233ENST00000557768 ZNF330Q9Y3S2 320 aaPredicted RBP8.67□□□□□ -1.02
HNRNPC-233ENST00000557768 TIAM1Q13009 1591 aa8.66□□□□□ -1.02
HNRNPC-233ENST00000557768 TRAK2O60296 914 aa8.66□□□□□ -1.02
HNRNPC-233ENST00000557768 DHX9Q08211 1270 aaKnown RBP8.66□□□□□ -1.02
HNRNPC-233ENST00000557768 SCARF1Q14162 830 aa8.66□□□□□ -1.02
HNRNPC-233ENST00000557768 C6orf118Q5T5N4 469 aa8.66□□□□□ -1.02
HNRNPC-233ENST00000557768 TRIM47Q96LD4 638 aa8.66□□□□□ -1.02
HNRNPC-233ENST00000557768 ZFP42Q96MM3 310 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms