RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 SLC27A3Q5K4L6 730 aa16.72■□□□□ 0.27
SLIRP-211ENST00000557623 MPRIPQ6WCQ1 1025 aa16.72■□□□□ 0.27
SLIRP-211ENST00000557623 CHRDL2Q6WN34 429 aa16.72■□□□□ 0.27
SLIRP-211ENST00000557623 DCAF5Q96JK2 942 aa16.72■□□□□ 0.27
SLIRP-211ENST00000557623 HMGB2P26583 209 aaKnown RBP16.71■□□□□ 0.27
SLIRP-211ENST00000557623 R3HDM1Q15032 1099 aaKnown RBP16.71■□□□□ 0.27
SLIRP-211ENST00000557623 TMOD3Q9NYL9 352 aa16.71■□□□□ 0.27
SLIRP-211ENST00000557623 CLEC11AQ9Y240 323 aa16.71■□□□□ 0.27
SLIRP-211ENST00000557623 PSDA5PKW4 1024 aaPredicted RBP16.7■□□□□ 0.26
SLIRP-211ENST00000557623 ERVV-2B6SEH9 535 aa16.7■□□□□ 0.26
SLIRP-211ENST00000557623 AKAP4Q5JQC9 854 aa16.7■□□□□ 0.26
SLIRP-211ENST00000557623 SMARCC1Q92922 1105 aaPredicted RBP16.7■□□□□ 0.26
SLIRP-211ENST00000557623 MYBBP1AQ9BQG0 1328 aaKnown RBP16.7■□□□□ 0.26
SLIRP-211ENST00000557623 U2AF1L5P0DN76 240 aaPredicted RBP16.69■□□□□ 0.26
SLIRP-211ENST00000557623 U2AF1Q01081 240 aaKnown RBP eCLIP16.69■□□□□ 0.26
SLIRP-211ENST00000557623 PAPPAQ13219 1627 aa16.69■□□□□ 0.26
SLIRP-211ENST00000557623 TAF1LQ8IZX4 1826 aa16.68■□□□□ 0.26
SLIRP-211ENST00000557623 PIGBQ92521 554 aa16.68■□□□□ 0.26
SLIRP-211ENST00000557623 STK32BQ9NY57 414 aa16.68■□□□□ 0.26
SLIRP-211ENST00000557623 KDM6AO15550 1401 aaPredicted RBP16.68■□□□□ 0.26
SLIRP-211ENST00000557623 PALLDQ8WX93 1383 aa16.67■□□□□ 0.26
SLIRP-211ENST00000557623 C5P01031 1676 aa16.67■□□□□ 0.26
SLIRP-211ENST00000557623 FCHSD2O94868 740 aa16.67■□□□□ 0.26
SLIRP-211ENST00000557623 MTHFSDQ2M296 383 aaKnown RBP16.67■□□□□ 0.26
SLIRP-211ENST00000557623 GAS2L2Q8NHY3 880 aa16.67■□□□□ 0.26
SLIRP-211ENST00000557623 RSPH6AQ9H0K4 717 aa16.67■□□□□ 0.26
SLIRP-211ENST00000557623 QSER1Q2KHR3 1735 aa16.67■□□□□ 0.26
SLIRP-211ENST00000557623 ADAMTS7Q9UKP4 1686 aa16.66■□□□□ 0.26
SLIRP-211ENST00000557623 PRKAR2BP31323 418 aa16.66■□□□□ 0.26
SLIRP-211ENST00000557623 CABP4P57796 275 aa16.66■□□□□ 0.26
SLIRP-211ENST00000557623 ANO8Q9HCE9 1232 aaPredicted RBP16.66■□□□□ 0.26
SLIRP-211ENST00000557623 LRRC4BQ9NT99 713 aa16.66■□□□□ 0.26
SLIRP-211ENST00000557623 CCNL1Q9UK58 526 aaPredicted RBP16.66■□□□□ 0.26
SLIRP-211ENST00000557623 SLC15A2Q16348 729 aa16.65■□□□□ 0.26
SLIRP-211ENST00000557623 PRKRIP1Q9H875 184 aaPredicted RBP16.65■□□□□ 0.26
SLIRP-211ENST00000557623 LRP5O75197 1615 aa16.64■□□□□ 0.25
SLIRP-211ENST00000557623 NEFMP07197 916 aa16.64■□□□□ 0.25
SLIRP-211ENST00000557623 PNNQ9H307 717 aaKnown RBP16.64■□□□□ 0.25
SLIRP-211ENST00000557623 CASZ1Q86V15 1759 aa16.64■□□□□ 0.25
SLIRP-211ENST00000557623 ZNF831Q5JPB2 1677 aa16.63■□□□□ 0.25
SLIRP-211ENST00000557623 MAP3K5Q99683 1374 aa16.63■□□□□ 0.25
SLIRP-211ENST00000557623 TUBGCP6Q96RT7 1819 aa16.62■□□□□ 0.25
SLIRP-211ENST00000557623 GNAT3A8MTJ3 354 aa16.62■□□□□ 0.25
SLIRP-211ENST00000557623 RNMTO43148 476 aaKnown RBP16.62■□□□□ 0.25
SLIRP-211ENST00000557623 ASAP1Q9ULH1 1129 aa16.62■□□□□ 0.25
SLIRP-211ENST00000557623 MRC1P22897 1456 aa16.61■□□□□ 0.25
SLIRP-211ENST00000557623 DLG5Q8TDM6 1919 aa16.61■□□□□ 0.25
SLIRP-211ENST00000557623 NFATC2IPQ8NCF5 419 aa16.61■□□□□ 0.25
SLIRP-211ENST00000557623 PHACTR3Q96KR7 559 aa16.61■□□□□ 0.25
SLIRP-211ENST00000557623 ATG3Q9NT62 314 aa16.61■□□□□ 0.25
SLIRP-211ENST00000557623 SIPA1L3O60292 1781 aaPredicted RBP16.6■□□□□ 0.25
SLIRP-211ENST00000557623 LOC102724428A0A0B4J2F2 783 aa16.6■□□□□ 0.25
SLIRP-211ENST00000557623 KCNQ4P56696 695 aa16.6■□□□□ 0.25
SLIRP-211ENST00000557623 SIK1P57059 783 aa16.6■□□□□ 0.25
SLIRP-211ENST00000557623 SLC52A2Q9HAB3 445 aa16.6■□□□□ 0.25
SLIRP-211ENST00000557623 LGR6Q9HBX8 967 aa16.6■□□□□ 0.25
SLIRP-211ENST00000557623 C4BP0C0L5 1744 aa16.59■□□□□ 0.25
SLIRP-211ENST00000557623 ZNF827Q17R98 1081 aa16.59■□□□□ 0.25
SLIRP-211ENST00000557623 TFCP2L1Q9NZI6 479 aa16.58■□□□□ 0.24
SLIRP-211ENST00000557623 COL5A3P25940 1745 aaPredicted RBP16.57■□□□□ 0.24
SLIRP-211ENST00000557623 ATP6V1AP38606 617 aa16.57■□□□□ 0.24
SLIRP-211ENST00000557623 RTF1Q92541 710 aaKnown RBP16.57■□□□□ 0.24
SLIRP-211ENST00000557623 UBR3Q6ZT12 1888 aa16.56■□□□□ 0.24
SLIRP-211ENST00000557623 MAPK8IP3Q9UPT6 1336 aa16.56■□□□□ 0.24
SLIRP-211ENST00000557623 HTATSF1O43719 755 aaKnown RBP16.56■□□□□ 0.24
SLIRP-211ENST00000557623 TEFQ10587 303 aa16.56■□□□□ 0.24
SLIRP-211ENST00000557623 PLEKHF1Q96S99 279 aa16.56■□□□□ 0.24
SLIRP-211ENST00000557623 SPON1Q9HCB6 807 aa16.56■□□□□ 0.24
SLIRP-211ENST00000557623 CICQ96RK0 1608 aaPredicted RBP16.56■□□□□ 0.24
SLIRP-211ENST00000557623 ANP32CO43423 234 aa16.55■□□□□ 0.24
SLIRP-211ENST00000557623 WDR43Q15061 677 aaKnown RBP eCLIP16.55■□□□□ 0.24
SLIRP-211ENST00000557623 IL17REQ8NFR9 667 aa16.55■□□□□ 0.24
SLIRP-211ENST00000557623 UBR2Q8IWV8 1755 aa16.55■□□□□ 0.24
SLIRP-211ENST00000557623 CEMIPQ8WUJ3 1361 aa16.54■□□□□ 0.24
SLIRP-211ENST00000557623 FLAD1Q8NFF5 587 aa16.54■□□□□ 0.24
SLIRP-211ENST00000557623 AK7Q96M32 723 aa16.54■□□□□ 0.24
SLIRP-211ENST00000557623 TJP1Q07157 1748 aa16.53■□□□□ 0.24
SLIRP-211ENST00000557623 PNPLA7Q6ZV29 1317 aa16.53■□□□□ 0.24
SLIRP-211ENST00000557623 PRR29P0C7W0 189 aa16.53■□□□□ 0.24
SLIRP-211ENST00000557623 SLC16A10Q8TF71 515 aa16.53■□□□□ 0.24
SLIRP-211ENST00000557623 PDGFDQ9GZP0 370 aaPredicted RBP16.53■□□□□ 0.24
SLIRP-211ENST00000557623 MTFR1LQ9H019 292 aa16.53■□□□□ 0.24
SLIRP-211ENST00000557623 PTCD1O75127 700 aaKnown RBP16.52■□□□□ 0.24
SLIRP-211ENST00000557623 ITPK1Q13572 414 aa16.52■□□□□ 0.24
SLIRP-211ENST00000557623 NFE2L2Q16236 605 aa16.52■□□□□ 0.24
SLIRP-211ENST00000557623 LINC00116Q8NCU8 138 aa16.52■□□□□ 0.24
SLIRP-211ENST00000557623 COL24A1Q17RW2 1714 aa16.51■□□□□ 0.23
SLIRP-211ENST00000557623 ZBTB7AO95365 584 aa16.51■□□□□ 0.23
SLIRP-211ENST00000557623 TTC5Q8N0Z6 440 aa16.51■□□□□ 0.23
SLIRP-211ENST00000557623 SLC4A9Q96Q91 983 aa16.51■□□□□ 0.23
SLIRP-211ENST00000557623 KCPQ6ZWJ8 1503 aa16.5■□□□□ 0.23
SLIRP-211ENST00000557623 SLC39A6Q13433 755 aa16.5■□□□□ 0.23
SLIRP-211ENST00000557623 RC3H1Q5TC82 1133 aaKnown RBP16.5■□□□□ 0.23
SLIRP-211ENST00000557623 MYH14Q7Z406 1995 aaKnown RBP16.49■□□□□ 0.23
SLIRP-211ENST00000557623 CNTNAP4Q9C0A0 1308 aa16.49■□□□□ 0.23
SLIRP-211ENST00000557623 MCM10Q7L590 875 aa16.49■□□□□ 0.23
SLIRP-211ENST00000557623 VSIG10Q8N0Z9 540 aa16.49■□□□□ 0.23
SLIRP-211ENST00000557623 BTBD11A6QL63 1104 aa16.48■□□□□ 0.23
SLIRP-211ENST00000557623 GNPATO15228 680 aa16.48■□□□□ 0.23
SLIRP-211ENST00000557623 SSFA2P28290 1259 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms