RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 PRMT3O60678 531 aa5.08□□□□□ -1.6
TRAV28-201ENST00000557548 BMP1P13497 986 aa5.08□□□□□ -1.6
TRAV28-201ENST00000557548 ERCC3P19447 782 aa5.08□□□□□ -1.6
TRAV28-201ENST00000557548 ATP1A2P50993 1020 aa5.08□□□□□ -1.6
TRAV28-201ENST00000557548 ZBTB33Q86T24 672 aa5.08□□□□□ -1.6
TRAV28-201ENST00000557548 FAM160A2Q8N612 972 aaPredicted RBP5.08□□□□□ -1.6
TRAV28-201ENST00000557548 CCDC85AQ96PX6 553 aaPredicted RBP5.08□□□□□ -1.6
TRAV28-201ENST00000557548 SPSB2Q99619 263 aa5.08□□□□□ -1.6
TRAV28-201ENST00000557548 CARD14Q9BXL6 1004 aa5.08□□□□□ -1.6
TRAV28-201ENST00000557548 DOLKQ9UPQ8 538 aa5.08□□□□□ -1.6
TRAV28-201ENST00000557548 KIAA1024Q9UPX6 916 aa5.08□□□□□ -1.6
TRAV28-201ENST00000557548 ITGB2P05107 769 aa5.07□□□□□ -1.6
TRAV28-201ENST00000557548 SLURP2P0DP57 97 aa5.07□□□□□ -1.6
TRAV28-201ENST00000557548 MMP16P51512 607 aa5.07□□□□□ -1.6
TRAV28-201ENST00000557548 OXLD1Q5BKU9 147 aa5.07□□□□□ -1.6
TRAV28-201ENST00000557548 DZIP3Q86Y13 1208 aaKnown RBP5.07□□□□□ -1.6
TRAV28-201ENST00000557548 MRRFQ96E11 262 aaKnown RBP5.07□□□□□ -1.6
TRAV28-201ENST00000557548 BCL2L13Q9BXK5 485 aa5.07□□□□□ -1.6
TRAV28-201ENST00000557548 KIAA1522Q9P206 1035 aaPredicted RBP5.07□□□□□ -1.6
TRAV28-201ENST00000557548 MAGEB6P1A0A0J9YX57 407 aa5.06□□□□□ -1.6
TRAV28-201ENST00000557548 COBLO75128 1261 aa5.06□□□□□ -1.6
TRAV28-201ENST00000557548 DKK1O94907 266 aa5.06□□□□□ -1.6
TRAV28-201ENST00000557548 ARHGEF15O94989 841 aa5.06□□□□□ -1.6
TRAV28-201ENST00000557548 ABL1P00519 1130 aa5.06□□□□□ -1.6
TRAV28-201ENST00000557548 ZNF16P17020 682 aaPredicted RBP5.06□□□□□ -1.6
TRAV28-201ENST00000557548 GTF2IP78347 998 aa5.06□□□□□ -1.6
TRAV28-201ENST00000557548 ZNF211Q13398 564 aaPredicted RBP5.06□□□□□ -1.6
TRAV28-201ENST00000557548 SH3BP5LQ7L8J4 393 aa5.06□□□□□ -1.6
TRAV28-201ENST00000557548 SIX5Q8N196 739 aa5.06□□□□□ -1.6
TRAV28-201ENST00000557548 LARGE2Q8N3Y3 721 aa5.06□□□□□ -1.6
TRAV28-201ENST00000557548 C1orf216Q8TAB5 229 aa5.06□□□□□ -1.6
TRAV28-201ENST00000557548 PRIMPOLQ96LW4 560 aa5.06□□□□□ -1.6
TRAV28-201ENST00000557548 UNC93B1Q9H1C4 597 aa5.06□□□□□ -1.6
TRAV28-201ENST00000557548 CXXC1Q9P0U4 656 aaPredicted RBP5.06□□□□□ -1.6
TRAV28-201ENST00000557548 ANKRD33BA6NCL7 494 aa5.05□□□□□ -1.6
TRAV28-201ENST00000557548 H3BRB1 525 aa5.05□□□□□ -1.6
TRAV28-201ENST00000557548 ZBTB7BO15156 539 aaPredicted RBP5.05□□□□□ -1.6
TRAV28-201ENST00000557548 LGR5O75473 907 aa5.05□□□□□ -1.6
TRAV28-201ENST00000557548 SEC13P55735 322 aa5.05□□□□□ -1.6
TRAV28-201ENST00000557548 PSME1Q06323 249 aa5.05□□□□□ -1.6
TRAV28-201ENST00000557548 OCLNQ16625 522 aa5.05□□□□□ -1.6
TRAV28-201ENST00000557548 PTCRAQ6ISU1 281 aaPredicted RBP5.05□□□□□ -1.6
TRAV28-201ENST00000557548 CCDC24Q8N4L8 307 aa5.05□□□□□ -1.6
TRAV28-201ENST00000557548 TPCN2Q8NHX9 752 aa5.05□□□□□ -1.6
TRAV28-201ENST00000557548 GIPC2Q8TF65 315 aa5.05□□□□□ -1.6
TRAV28-201ENST00000557548 SIRT1Q96EB6 747 aa5.05□□□□□ -1.6
TRAV28-201ENST00000557548 DCAF5Q96JK2 942 aa5.05□□□□□ -1.6
TRAV28-201ENST00000557548 MRGPRX2Q96LB1 330 aa5.05□□□□□ -1.6
TRAV28-201ENST00000557548 TUT1Q9H6E5 874 aaKnown RBP5.05□□□□□ -1.6
TRAV28-201ENST00000557548 ANO2Q9NQ90 1003 aa5.05□□□□□ -1.6
TRAV28-201ENST00000557548 IGSF5Q9NSI5 407 aa5.05□□□□□ -1.6
TRAV28-201ENST00000557548 USP35Q9P2H5 1018 aa5.05□□□□□ -1.6
TRAV28-201ENST00000557548 FCF1Q9Y324 198 aaKnown RBP5.05□□□□□ -1.6
TRAV28-201ENST00000557548 RBM19Q9Y4C8 960 aaKnown RBP5.05□□□□□ -1.6
TRAV28-201ENST00000557548 SFI1A8K8P3 1242 aa5.04□□□□□ -1.6
TRAV28-201ENST00000557548 ZBTB24O43167 697 aaPredicted RBP5.04□□□□□ -1.6
TRAV28-201ENST00000557548 GIGYF1O75420 1035 aaPredicted RBP5.04□□□□□ -1.6
TRAV28-201ENST00000557548 CCDC102BQ68D86 513 aa5.04□□□□□ -1.6
TRAV28-201ENST00000557548 NPAS4Q8IUM7 802 aa5.04□□□□□ -1.6
TRAV28-201ENST00000557548 CNTNAP3BQ96NU0 1288 aa5.04□□□□□ -1.6
TRAV28-201ENST00000557548 CNTNAP3Q9BZ76 1288 aa5.04□□□□□ -1.6
TRAV28-201ENST00000557548 SHROOM4Q9ULL8 1493 aa5.03□□□□□ -1.6
TRAV28-201ENST00000557548 BAG6P46379 1132 aa5.03□□□□□ -1.6
TRAV28-201ENST00000557548 KRT76Q01546 638 aa5.03□□□□□ -1.6
TRAV28-201ENST00000557548 ERFEQ4G0M1 354 aa5.03□□□□□ -1.6
TRAV28-201ENST00000557548 TAS1R3Q7RTX0 852 aa5.03□□□□□ -1.6
TRAV28-201ENST00000557548 GLYCTKQ8IVS8 523 aa5.03□□□□□ -1.6
TRAV28-201ENST00000557548 ZFP42Q96MM3 310 aa5.03□□□□□ -1.6
TRAV28-201ENST00000557548 MKNK1Q9BUB5 465 aa5.03□□□□□ -1.6
TRAV28-201ENST00000557548 EGFL7Q9UHF1 273 aa5.03□□□□□ -1.6
TRAV28-201ENST00000557548 CAPN5O15484 640 aaPredicted RBP5.02□□□□□ -1.61
TRAV28-201ENST00000557548 ICMTO60725 284 aa5.02□□□□□ -1.61
TRAV28-201ENST00000557548 AGERQ15109 404 aa5.02□□□□□ -1.61
TRAV28-201ENST00000557548 LINC01559Q495D7 138 aa5.02□□□□□ -1.61
TRAV28-201ENST00000557548 SH3RF1Q7Z6J0 888 aa5.02□□□□□ -1.61
TRAV28-201ENST00000557548 FOXJ1Q92949 421 aa5.02□□□□□ -1.61
TRAV28-201ENST00000557548 SLC10A4Q96EP9 437 aa5.02□□□□□ -1.61
TRAV28-201ENST00000557548 HINFPQ9BQA5 517 aa5.02□□□□□ -1.61
TRAV28-201ENST00000557548 SEPT3Q9UH03 358 aa5.02□□□□□ -1.61
TRAV28-201ENST00000557548 PCDHB11Q9Y5F2 797 aa5.02□□□□□ -1.61
TRAV28-201ENST00000557548 PCDHGA11Q9Y5H2 935 aa5.02□□□□□ -1.61
TRAV28-201ENST00000557548 MAPK1P28482 360 aa5.01□□□□□ -1.61
TRAV28-201ENST00000557548 MTMR3Q13615 1198 aa5.01□□□□□ -1.61
TRAV28-201ENST00000557548 RNF20Q5VTR2 975 aa5.01□□□□□ -1.61
TRAV28-201ENST00000557548 GTF3C2Q8WUA4 911 aaPredicted RBP5.01□□□□□ -1.61
TRAV28-201ENST00000557548 BAP1Q92560 729 aa5.01□□□□□ -1.61
TRAV28-201ENST00000557548 C21orf2O43822 256 aa5□□□□□ -1.61
TRAV28-201ENST00000557548 FURINP09958 794 aa5□□□□□ -1.61
TRAV28-201ENST00000557548 TCF3P15923 654 aa5□□□□□ -1.61
TRAV28-201ENST00000557548 TAGLNQ01995 201 aaKnown RBP5□□□□□ -1.61
TRAV28-201ENST00000557548 NBPF20Q3BBV1 942 aa5□□□□□ -1.61
TRAV28-201ENST00000557548 ZNF326Q5BKZ1 582 aaKnown RBP5□□□□□ -1.61
TRAV28-201ENST00000557548 C4orf48Q5BLP8 95 aa5□□□□□ -1.61
TRAV28-201ENST00000557548 CAPN12Q6ZSI9 719 aa5□□□□□ -1.61
TRAV28-201ENST00000557548 BPHLQ86WA6 291 aaPredicted RBP5□□□□□ -1.61
TRAV28-201ENST00000557548 ZNF511Q8NB15 262 aa5□□□□□ -1.61
TRAV28-201ENST00000557548 TSEN2Q8NCE0 465 aaKnown RBP5□□□□□ -1.61
TRAV28-201ENST00000557548 PURBQ96QR8 312 aaKnown RBP5□□□□□ -1.61
TRAV28-201ENST00000557548 ESPNB1AK53 854 aa4.99□□□□□ -1.61
TRAV28-201ENST00000557548 PPFIA3O75145 1194 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms