RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 AEBP1Q8IUX7 1158 aa20.73■□□□□ 0.91
PTPN21-208ENST00000556564 TMOD2Q9NZR1 351 aa20.73■□□□□ 0.91
PTPN21-208ENST00000556564 MYO5CQ9NQX4 1742 aa20.73■□□□□ 0.91
PTPN21-208ENST00000556564 IL2RBP14784 551 aa20.73■□□□□ 0.91
PTPN21-208ENST00000556564 PRM3Q9NNZ6 103 aa20.73■□□□□ 0.91
PTPN21-208ENST00000556564 BTG4Q9NY30 223 aa20.73■□□□□ 0.91
PTPN21-208ENST00000556564 EIF4A2Q14240 407 aaKnown RBP20.73■□□□□ 0.91
PTPN21-208ENST00000556564 DDX17Q92841 729 aaKnown RBP20.72■□□□□ 0.91
PTPN21-208ENST00000556564 TBX22Q9Y458 520 aa20.72■□□□□ 0.91
PTPN21-208ENST00000556564 ASXL1Q8IXJ9 1541 aa20.72■□□□□ 0.91
PTPN21-208ENST00000556564 TPM3P06753 285 aa20.72■□□□□ 0.91
PTPN21-208ENST00000556564 AIDAQ96BJ3 306 aa20.72■□□□□ 0.91
PTPN21-208ENST00000556564 FLIIQ13045 1269 aa20.72■□□□□ 0.91
PTPN21-208ENST00000556564 MAPKBP1O60336 1514 aa20.72■□□□□ 0.91
PTPN21-208ENST00000556564 TRPM2O94759 1503 aa20.72■□□□□ 0.91
PTPN21-208ENST00000556564 NKTRP30414 1462 aaKnown RBP20.71■□□□□ 0.91
PTPN21-208ENST00000556564 CHMP5Q9NZZ3 219 aa20.71■□□□□ 0.91
PTPN21-208ENST00000556564 SKOR2Q2VWA4 1001 aaPredicted RBP20.71■□□□□ 0.91
PTPN21-208ENST00000556564 PIP4K2AP48426 406 aaPredicted RBP20.71■□□□□ 0.91
PTPN21-208ENST00000556564 C6orf229H3BNL8 230 aa20.71■□□□□ 0.91
PTPN21-208ENST00000556564 NEO1Q92859 1461 aa20.71■□□□□ 0.91
PTPN21-208ENST00000556564 GCP02774 474 aa20.7■□□□□ 0.9
PTPN21-208ENST00000556564 USP5P45974 858 aa20.7■□□□□ 0.9
PTPN21-208ENST00000556564 CWC25Q9NXE8 425 aaPredicted RBP20.7■□□□□ 0.9
PTPN21-208ENST00000556564 CYP46A1Q9Y6A2 500 aa20.7■□□□□ 0.9
PTPN21-208ENST00000556564 SLC5A1P13866 664 aa20.7■□□□□ 0.9
PTPN21-208ENST00000556564 ORAI2Q96SN7 254 aa20.7■□□□□ 0.9
PTPN21-208ENST00000556564 ST5P78524 1137 aa20.7■□□□□ 0.9
PTPN21-208ENST00000556564 KIF1BPQ96EK5 621 aa20.7■□□□□ 0.9
PTPN21-208ENST00000556564 CCDC73Q6ZRK6 1079 aa20.7■□□□□ 0.9
PTPN21-208ENST00000556564 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.69■□□□□ 0.9
PTPN21-208ENST00000556564 NUCB2P80303 420 aa20.69■□□□□ 0.9
PTPN21-208ENST00000556564 DZIP1Q86YF9 867 aaKnown RBP20.69■□□□□ 0.9
PTPN21-208ENST00000556564 CCDC8Q9H0W5 538 aaPredicted RBP20.69■□□□□ 0.9
PTPN21-208ENST00000556564 BOLA2Q9H3K6 86 aa20.69■□□□□ 0.9
PTPN21-208ENST00000556564 TPM1P09493 284 aa20.69■□□□□ 0.9
PTPN21-208ENST00000556564 PPP1R42Q7Z4L9 355 aa20.69■□□□□ 0.9
PTPN21-208ENST00000556564 YEATS2Q9ULM3 1422 aa20.69■□□□□ 0.9
PTPN21-208ENST00000556564 PIBF1Q8WXW3 757 aa20.68■□□□□ 0.9
PTPN21-208ENST00000556564 NBPF6Q5VWK0 638 aa20.68■□□□□ 0.9
PTPN21-208ENST00000556564 NBPF5PQ86XG9 351 aaPredicted RBP20.68■□□□□ 0.9
PTPN21-208ENST00000556564 NBPF4Q96M43 638 aa20.68■□□□□ 0.9
PTPN21-208ENST00000556564 DDX46Q7L014 1031 aaKnown RBP20.68■□□□□ 0.9
PTPN21-208ENST00000556564 TMEM132AQ24JP5 1023 aa20.67■□□□□ 0.9
PTPN21-208ENST00000556564 AKAP4Q5JQC9 854 aa20.67■□□□□ 0.9
PTPN21-208ENST00000556564 CHPF2Q9P2E5 772 aa20.67■□□□□ 0.9
PTPN21-208ENST00000556564 RAB11FIP3O75154 756 aa20.67■□□□□ 0.9
PTPN21-208ENST00000556564 POLR3DP05423 398 aaPredicted RBP20.67■□□□□ 0.9
PTPN21-208ENST00000556564 ANKRD20A12PQ8NF67 263 aa20.66■□□□□ 0.9
PTPN21-208ENST00000556564 CNKSR2Q8WXI2 1034 aa20.66■□□□□ 0.9
PTPN21-208ENST00000556564 UBAC1Q9BSL1 405 aa20.66■□□□□ 0.9
PTPN21-208ENST00000556564 CEBPZQ03701 1054 aaKnown RBP20.66■□□□□ 0.9
PTPN21-208ENST00000556564 PI4KAP2A4QPH2 592 aa20.66■□□□□ 0.9
PTPN21-208ENST00000556564 PI4KAP1Q8N8J0 262 aa20.66■□□□□ 0.9
PTPN21-208ENST00000556564 A0A1W2PP64 1363 aa20.65■□□□□ 0.9
PTPN21-208ENST00000556564 CRACR2BQ8N4Y2 399 aaPredicted RBP20.65■□□□□ 0.9
PTPN21-208ENST00000556564 POLKQ9UBT6 870 aa20.65■□□□□ 0.9
PTPN21-208ENST00000556564 CDK5RAP3Q96JB5 506 aa20.65■□□□□ 0.9
PTPN21-208ENST00000556564 PTPRCP08575 1304 aa20.65■□□□□ 0.9
PTPN21-208ENST00000556564 SASS6Q6UVJ0 657 aa20.65■□□□□ 0.9
PTPN21-208ENST00000556564 UBE3BQ7Z3V4 1068 aa20.65■□□□□ 0.9
PTPN21-208ENST00000556564 WWC3Q9ULE0 1092 aa20.65■□□□□ 0.9
PTPN21-208ENST00000556564 FLT4P35916 1363 aa20.65■□□□□ 0.9
PTPN21-208ENST00000556564 MINDY4BA8MYZ0 360 aa20.64■□□□□ 0.9
PTPN21-208ENST00000556564 TTLL12Q14166 644 aaPredicted RBP20.64■□□□□ 0.9
PTPN21-208ENST00000556564 C20orf194Q5TEA3 1177 aa20.64■□□□□ 0.9
PTPN21-208ENST00000556564 MTHFSDQ2M296 383 aaKnown RBP20.64■□□□□ 0.89
PTPN21-208ENST00000556564 PZPP20742 1482 aa20.64■□□□□ 0.89
PTPN21-208ENST00000556564 HOXC9P31274 260 aa20.64■□□□□ 0.89
PTPN21-208ENST00000556564 PIK3R4Q99570 1358 aa20.64■□□□□ 0.89
PTPN21-208ENST00000556564 NFATC2IPQ8NCF5 419 aa20.64■□□□□ 0.89
PTPN21-208ENST00000556564 MX1P20591 662 aa20.64■□□□□ 0.89
PTPN21-208ENST00000556564 CTNNA3Q9UI47 895 aa20.64■□□□□ 0.89
PTPN21-208ENST00000556564 JAKMIP1Q96N16 626 aaKnown RBP20.63■□□□□ 0.89
PTPN21-208ENST00000556564 SETDB2Q96T68 719 aa20.63■□□□□ 0.89
PTPN21-208ENST00000556564 SMARCC1Q92922 1105 aaPredicted RBP20.63■□□□□ 0.89
PTPN21-208ENST00000556564 RABEP1Q15276 862 aa20.63■□□□□ 0.89
PTPN21-208ENST00000556564 TRIM22Q8IYM9 498 aa20.63■□□□□ 0.89
PTPN21-208ENST00000556564 CDC5LQ99459 802 aaKnown RBP20.63■□□□□ 0.89
PTPN21-208ENST00000556564 SOGA3Q5TF21 947 aa20.63■□□□□ 0.89
PTPN21-208ENST00000556564 PAXIP1Q6ZW49 1069 aaPredicted RBP20.63■□□□□ 0.89
PTPN21-208ENST00000556564 ANKRD13DQ6ZTN6 518 aa20.62■□□□□ 0.89
PTPN21-208ENST00000556564 XAGE3Q8WTP9 111 aa20.62■□□□□ 0.89
PTPN21-208ENST00000556564 SIRT1Q96EB6 747 aa20.62■□□□□ 0.89
PTPN21-208ENST00000556564 ZCCHC11Q5TAX3 1644 aaKnown RBP20.62■□□□□ 0.89
PTPN21-208ENST00000556564 IMMTQ16891 758 aaKnown RBP20.62■□□□□ 0.89
PTPN21-208ENST00000556564 TFCP2L1Q9NZI6 479 aa20.62■□□□□ 0.89
PTPN21-208ENST00000556564 LDHAL6AQ6ZMR3 332 aa20.61■□□□□ 0.89
PTPN21-208ENST00000556564 ADGBQ8N7X0 1667 aa20.61■□□□□ 0.89
PTPN21-208ENST00000556564 TRIM27P14373 513 aa20.6■□□□□ 0.89
PTPN21-208ENST00000556564 PDRG1Q9NUG6 133 aa20.6■□□□□ 0.89
PTPN21-208ENST00000556564 ANKRD1Q15327 319 aa20.6■□□□□ 0.89
PTPN21-208ENST00000556564 BLOC1S2Q6QNY1 142 aa20.6■□□□□ 0.89
PTPN21-208ENST00000556564 MAP3K12Q12852 859 aa20.59■□□□□ 0.89
PTPN21-208ENST00000556564 COPS6Q7L5N1 327 aa20.59■□□□□ 0.89
PTPN21-208ENST00000556564 MKNK2Q9HBH9 465 aa20.59■□□□□ 0.89
PTPN21-208ENST00000556564 R3HCC1Q9Y3T6 440 aaKnown RBP20.59■□□□□ 0.89
PTPN21-208ENST00000556564 EYA1Q99502 592 aa20.59■□□□□ 0.89
PTPN21-208ENST00000556564 MAGI3Q5TCQ9 1506 aa20.58■□□□□ 0.89
PTPN21-208ENST00000556564 KRT18P05783 430 aaKnown RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms